RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 NCR1Q12200 1170 aa12.63□□□□□ -0.39
snR78snR78 GUT1P32190 709 aa12.62□□□□□ -0.39
snR78snR78 SEC61P32915 480 aa12.62□□□□□ -0.39
snR78snR78 JIP4Q03361 876 aa12.62□□□□□ -0.39
snR78snR78 NOP53Q12080 455 aaKnown RBP12.6□□□□□ -0.39
snR78snR78 YEL023CP39992 682 aa12.59□□□□□ -0.39
snR78snR78 PTC4P38089 393 aa12.57□□□□□ -0.4
snR78snR78 BMT6Q12291 365 aa12.56□□□□□ -0.4
snR78snR78 TFG1P41895 735 aaPredicted RBP12.55□□□□□ -0.4
snR78snR78 DAN4P47179 1161 aa12.55□□□□□ -0.4
snR78snR78 SET1P38827 1080 aaKnown RBP12.53□□□□□ -0.4
snR78snR78 SOL3P38858 249 aa12.41□□□□□ -0.42
snR78snR78 YDL129WQ07555 291 aa12.39□□□□□ -0.43
snR78snR78 SAP30P38429 201 aa12.38□□□□□ -0.43
snR78snR78 NST1P53935 1240 aa12.38□□□□□ -0.43
snR78snR78 YGR273CP53329 174 aa12.36□□□□□ -0.43
snR78snR78 PML39Q03760 334 aa12.34□□□□□ -0.43
snR78snR78 MPH3P0CE00 602 aa12.32□□□□□ -0.44
snR78snR78 AI4P03878 556 aa12.31□□□□□ -0.44
snR78snR78 IFH1P39520 1085 aa12.28□□□□□ -0.44
snR78snR78 DMA1P38823 416 aa12.26□□□□□ -0.45
snR78snR78 ILV3P39522 585 aaKnown RBP12.23□□□□□ -0.45
snR78snR78 MID1P41821 548 aa12.22□□□□□ -0.45
snR78snR78 PEX29Q03370 554 aa12.16□□□□□ -0.46
snR78snR78 YPR148CQ06523 435 aa12.16□□□□□ -0.46
snR78snR78 KEX1P09620 729 aa12.15□□□□□ -0.46
snR78snR78 CHL1P22516 861 aaPredicted RBP12.15□□□□□ -0.46
snR78snR78 PRE3P38624 215 aa12.14□□□□□ -0.47
snR78snR78 VHR2P40041 505 aa12.14□□□□□ -0.47
snR78snR78 UBP14P38237 781 aaKnown RBP12.12□□□□□ -0.47
snR78snR78 VPS70P47161 811 aa12.11□□□□□ -0.47
snR78snR78 ELP4Q02884 456 aaKnown RBP12.11□□□□□ -0.47
snR78snR78 SLI15P38283 698 aa12.1□□□□□ -0.47
snR78snR78 YLR326WQ06170 240 aaKnown RBP12.1□□□□□ -0.47
snR78snR78 YDR344CQ05510 147 aa12.08□□□□□ -0.48
snR78snR78 ARH1P48360 493 aa12.06□□□□□ -0.48
snR78snR78 RAD54P32863 898 aa12.03□□□□□ -0.48
snR78snR78 REF2P42073 533 aaPredicted RBP12.03□□□□□ -0.48
snR78snR78 MPC54Q08550 464 aa12.02□□□□□ -0.49
snR78snR78 PCS60P38137 543 aaKnown RBP RIP-Chip data12.01□□□□□ -0.49not detected
snR78snR78 HAP5Q02516 242 aa11.98□□□□□ -0.49
snR78snR78 DPL1Q05567 589 aa11.98□□□□□ -0.49
snR78snR78 KIC1P38692 1080 aa11.97□□□□□ -0.49
snR78snR78 NMA111P53920 997 aa11.96□□□□□ -0.49
snR78snR78 YDR090CQ03193 310 aa11.95□□□□□ -0.5
snR78snR78 BCK2P33306 851 aa11.94□□□□□ -0.5
snR78snR78 SPT23P35210 1082 aa11.94□□□□□ -0.5
snR78snR78 CDC73Q06697 393 aa11.92□□□□□ -0.5
snR78snR78 RQC2Q12532 1038 aaKnown RBP11.92□□□□□ -0.5
snR78snR78 CKB1P43639 278 aa11.91□□□□□ -0.5
snR78snR78 RPP1BP10622 106 aaKnown RBP11.89□□□□□ -0.51
snR78snR78 SAS10Q12136 610 aaPredicted RBP11.89□□□□□ -0.51
snR78snR78 VRP1P37370 817 aa11.87□□□□□ -0.51
snR78snR78 BNI4P53858 892 aa11.87□□□□□ -0.51
snR78snR78 ISU2Q12056 156 aa11.86□□□□□ -0.51
snR78snR78 MAK21Q12176 1025 aaKnown RBP11.86□□□□□ -0.51
snR78snR78 COX6P00427 148 aa11.85□□□□□ -0.51
snR78snR78 PTC2P39966 464 aaKnown RBP11.83□□□□□ -0.52
snR78snR78 PBS2P08018 668 aa11.79□□□□□ -0.52
snR78snR78 YML082WQ04533 649 aaKnown RBP11.77□□□□□ -0.53
snR78snR78 PEX21P50091 288 aa11.74□□□□□ -0.53
snR78snR78 XDJ1P39102 459 aa11.72□□□□□ -0.53
snR78snR78 CSC1Q06538 782 aa11.71□□□□□ -0.53
snR78snR78 ORC6P38826 435 aa11.69□□□□□ -0.54
snR78snR78 SPB4P25808 606 aaPredicted RBP11.68□□□□□ -0.54
snR78snR78 PDR1P12383 1068 aa11.67□□□□□ -0.54
snR78snR78 GAP1P19145 602 aaPredicted RBP11.67□□□□□ -0.54
snR78snR78 TFB4Q12004 338 aa11.66□□□□□ -0.54
snR78snR78 YRR1Q12172 810 aa11.65□□□□□ -0.54
snR78snR78 MAM3Q12296 706 aa11.65□□□□□ -0.54
snR78snR78 RAM1P22007 431 aa11.63□□□□□ -0.55
snR78snR78 DSF2P38213 736 aa11.63□□□□□ -0.55
snR78snR78 TUM1Q08686 304 aaKnown RBP11.63□□□□□ -0.55
snR78snR78 YPR015CQ12531 247 aa11.63□□□□□ -0.55
snR78snR78 MVP1P40959 511 aaKnown RBP11.59□□□□□ -0.55
snR78snR78 RGR1P19263 1082 aa11.55□□□□□ -0.56
snR78snR78 IES2P40154 320 aa11.55□□□□□ -0.56
snR78snR78 GYP1Q08484 637 aa11.54□□□□□ -0.56
snR78snR78 YPR109WQ06104 294 aa11.52□□□□□ -0.57
snR78snR78 PSE1P32337 1089 aaKnown RBP11.51□□□□□ -0.57
snR78snR78 NUD1P32336 851 aa11.5□□□□□ -0.57
snR78snR78 NPL4P33755 580 aa11.48□□□□□ -0.57
snR78snR78 NUP42P49686 430 aaKnown RBP11.46□□□□□ -0.57
snR78snR78 DPS1P04802 557 aaKnown RBP11.45□□□□□ -0.58
snR78snR78 STR2P47164 639 aa11.45□□□□□ -0.58
snR78snR78 ISM1P48526 1002 aa11.45□□□□□ -0.58
snR78snR78 SAS4Q04003 481 aa11.45□□□□□ -0.58
snR78snR78 BUD20Q08004 166 aaPredicted RBP11.45□□□□□ -0.58
snR78snR78 DIT2P21595 489 aa11.42□□□□□ -0.58
snR78snR78 PRT1P06103 763 aaKnown RBP11.41□□□□□ -0.58
snR78snR78 GCD11P32481 527 aaKnown RBP11.39□□□□□ -0.59
snR78snR78 CLB5P30283 435 aa11.38□□□□□ -0.59
snR78snR78 TEA1P47988 759 aa11.32□□□□□ -0.6
snR78snR78 MRF1P30775 413 aaPredicted RBP11.31□□□□□ -0.6
snR78snR78 TY1A-DR4O74302 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-HP0C2I4 478 aaKnown RBP11.28□□□□□ -0.6
snR78snR78 TY1A-AP0CX57 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-PR1P0CX58 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-ORP0CX59 440 aa11.28□□□□□ -0.6
snR78snR78 TY1A-PR2P0CX60 440 aa11.28□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms