RNA–Protein interactions for RNA: snR189

snR189, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR189, Length 189 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR189snR189 SEC61P32915 480 aa11.12□□□□□ -0.63
snR189snR189 PTC3P34221 468 aaKnown RBP11.12□□□□□ -0.63
snR189snR189 DAN4P47179 1161 aa11.08□□□□□ -0.64
snR189snR189 ATH1P48016 1211 aa11.08□□□□□ -0.64
snR189snR189 JIP4Q03361 876 aa11.08□□□□□ -0.64
snR189snR189 YEL023CP39992 682 aa11.07□□□□□ -0.64
snR189snR189 TFG1P41895 735 aaPredicted RBP11.05□□□□□ -0.64
snR189snR189 PTC4P38089 393 aa11.04□□□□□ -0.64
snR189snR189 GUT1P32190 709 aa11.03□□□□□ -0.64
snR189snR189 SAP30P38429 201 aa10.96□□□□□ -0.65
snR189snR189 YDL129WQ07555 291 aa10.93□□□□□ -0.66
snR189snR189 SOL3P38858 249 aa10.91□□□□□ -0.66
snR189snR189 NOP53Q12080 455 aaKnown RBP10.89□□□□□ -0.67
snR189snR189 NST1P53935 1240 aa10.88□□□□□ -0.67
snR189snR189 PML39Q03760 334 aa10.87□□□□□ -0.67
snR189snR189 SET1P38827 1080 aaKnown RBP10.86□□□□□ -0.67
snR189snR189 MPH3P0CE00 602 aa10.79□□□□□ -0.68
snR189snR189 YGR273CP53329 174 aa10.79□□□□□ -0.68
snR189snR189 MID1P41821 548 aa10.78□□□□□ -0.68
snR189snR189 ILV3P39522 585 aaKnown RBP10.77□□□□□ -0.69
snR189snR189 AI4P03878 556 aa10.76□□□□□ -0.69
snR189snR189 YDR344CQ05510 147 aa10.75□□□□□ -0.69
snR189snR189 CHL1P22516 861 aaPredicted RBP10.73□□□□□ -0.69
snR189snR189 PRE3P38624 215 aa10.72□□□□□ -0.69
snR189snR189 ELP4Q02884 456 aaKnown RBP10.68□□□□□ -0.7
snR189snR189 PEX29Q03370 554 aa10.66□□□□□ -0.7
snR189snR189 KEX1P09620 729 aa10.61□□□□□ -0.71
snR189snR189 ARH1P48360 493 aa10.61□□□□□ -0.71
snR189snR189 SLI15P38283 698 aa10.6□□□□□ -0.71
snR189snR189 BCK2P33306 851 aa10.59□□□□□ -0.71
snR189snR189 VHR2P40041 505 aa10.59□□□□□ -0.71
snR189snR189 UBP14P38237 781 aaKnown RBP10.56□□□□□ -0.72
snR189snR189 YLR326WQ06170 240 aaKnown RBP10.56□□□□□ -0.72
snR189snR189 MPC54Q08550 464 aa10.56□□□□□ -0.72
snR189snR189 IFH1P39520 1085 aa10.54□□□□□ -0.72
snR189snR189 HAP5Q02516 242 aa10.52□□□□□ -0.73
snR189snR189 VRP1P37370 817 aa10.51□□□□□ -0.73
snR189snR189 NMA111P53920 997 aa10.5□□□□□ -0.73
snR189snR189 DPL1Q05567 589 aa10.49□□□□□ -0.73
snR189snR189 SPT23P35210 1082 aa10.48□□□□□ -0.73
snR189snR189 PCS60P38137 543 aaKnown RBP RIP-Chip data10.48□□□□□ -0.73not detected
snR189snR189 YPR148CQ06523 435 aa10.47□□□□□ -0.73
snR189snR189 VPS70P47161 811 aa10.46□□□□□ -0.73
snR189snR189 RAD54P32863 898 aa10.45□□□□□ -0.74
snR189snR189 CDC73Q06697 393 aa10.45□□□□□ -0.74
snR189snR189 DMA1P38823 416 aa10.42□□□□□ -0.74
snR189snR189 BNI4P53858 892 aa10.42□□□□□ -0.74
snR189snR189 REF2P42073 533 aaPredicted RBP10.41□□□□□ -0.74
snR189snR189 YDR090CQ03193 310 aa10.41□□□□□ -0.74
snR189snR189 PTC2P39966 464 aaKnown RBP10.39□□□□□ -0.75
snR189snR189 KIC1P38692 1080 aa10.37□□□□□ -0.75
snR189snR189 ISU2Q12056 156 aa10.37□□□□□ -0.75
snR189snR189 XDJ1P39102 459 aa10.36□□□□□ -0.75
snR189snR189 YML082WQ04533 649 aaKnown RBP10.33□□□□□ -0.76
snR189snR189 RPP1BP10622 106 aaKnown RBP10.29□□□□□ -0.76
snR189snR189 PDR1P12383 1068 aa10.26□□□□□ -0.77
snR189snR189 YPR015CQ12531 247 aa10.26□□□□□ -0.77
snR189snR189 COX6P00427 148 aa10.23□□□□□ -0.77
snR189snR189 RAM1P22007 431 aa10.23□□□□□ -0.77
snR189snR189 PEX21P50091 288 aa10.21□□□□□ -0.77
snR189snR189 MAK21Q12176 1025 aaKnown RBP10.2□□□□□ -0.78
snR189snR189 CKB1P43639 278 aa10.19□□□□□ -0.78
snR189snR189 YRR1Q12172 810 aa10.18□□□□□ -0.78
snR189snR189 GAP1P19145 602 aaPredicted RBP10.17□□□□□ -0.78
snR189snR189 ORC6P38826 435 aa10.17□□□□□ -0.78
snR189snR189 PBS2P08018 668 aa10.16□□□□□ -0.78
snR189snR189 CSC1Q06538 782 aa10.16□□□□□ -0.78
snR189snR189 DPS1P04802 557 aaKnown RBP10.15□□□□□ -0.78
snR189snR189 TUM1Q08686 304 aaKnown RBP10.14□□□□□ -0.79
snR189snR189 SAS10Q12136 610 aaPredicted RBP10.14□□□□□ -0.79
snR189snR189 TFB4Q12004 338 aa10.13□□□□□ -0.79
snR189snR189 GYP1Q08484 637 aa10.12□□□□□ -0.79
snR189snR189 MVP1P40959 511 aaKnown RBP10.08□□□□□ -0.8
snR189snR189 BUD20Q08004 166 aaPredicted RBP10.05□□□□□ -0.8
snR189snR189 RGR1P19263 1082 aa10.04□□□□□ -0.8
snR189snR189 NUD1P32336 851 aa10.04□□□□□ -0.8
snR189snR189 STR2P47164 639 aa10.04□□□□□ -0.8
snR189snR189 ISM1P48526 1002 aa10.03□□□□□ -0.8
snR189snR189 YPR109WQ06104 294 aa10.03□□□□□ -0.8
snR189snR189 MAM3Q12296 706 aa10.02□□□□□ -0.81
snR189snR189 SPB4P25808 606 aaPredicted RBP10□□□□□ -0.81
snR189snR189 RAS1P01119 309 aa9.99□□□□□ -0.81
snR189snR189 DSF2P38213 736 aa9.99□□□□□ -0.81
snR189snR189 SAS4Q04003 481 aa9.99□□□□□ -0.81
snR189snR189 PRT1P06103 763 aaKnown RBP9.98□□□□□ -0.81
snR189snR189 NPL4P33755 580 aa9.98□□□□□ -0.81
snR189snR189 IES2P40154 320 aa9.96□□□□□ -0.82
snR189snR189 SDH2P21801 266 aa9.95□□□□□ -0.82
snR189snR189 GCD11P32481 527 aaKnown RBP9.94□□□□□ -0.82
snR189snR189 PSE1P32337 1089 aaKnown RBP9.93□□□□□ -0.82
snR189snR189 TY1A-DR4O74302 440 aa9.89□□□□□ -0.83
snR189snR189 TY1A-HP0C2I4 478 aaKnown RBP9.89□□□□□ -0.83
snR189snR189 TY1A-AP0CX57 440 aa9.89□□□□□ -0.83
snR189snR189 TY1A-PR1P0CX58 440 aa9.89□□□□□ -0.83
snR189snR189 TY1A-ORP0CX59 440 aa9.89□□□□□ -0.83
snR189snR189 TY1A-PR2P0CX60 440 aa9.89□□□□□ -0.83
snR189snR189 TY1A-DR5P0CX65 440 aa9.89□□□□□ -0.83
snR189snR189 TY1A-ER2P0CX66 440 aa9.89□□□□□ -0.83
snR189snR189 TY1A-GR3P0CX67 440 aa9.89□□□□□ -0.83
snR189snR189 TY1A-LR1P0CX68 440 aa9.89□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms