RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W RTG1P32607 177 aa10.69□□□□□ -0.7
TFB4YPR056W SEC61P32915 480 aa10.69□□□□□ -0.7
TFB4YPR056W DCW1P36091 449 aa10.68□□□□□ -0.7
TFB4YPR056W GUT1P32190 709 aa10.67□□□□□ -0.7
TFB4YPR056W YJL171CP46992 396 aa10.66□□□□□ -0.7
TFB4YPR056W ATH1P48016 1211 aa10.66□□□□□ -0.7
TFB4YPR056W DAN4P47179 1161 aa10.63□□□□□ -0.71
TFB4YPR056W NCR1Q12200 1170 aa10.63□□□□□ -0.71
TFB4YPR056W PTC4P38089 393 aa10.62□□□□□ -0.71
TFB4YPR056W YEL023CP39992 682 aa10.61□□□□□ -0.71
TFB4YPR056W BMT6Q12291 365 aa10.58□□□□□ -0.72
TFB4YPR056W TFG1P41895 735 aaPredicted RBP10.56□□□□□ -0.72
TFB4YPR056W SET1P38827 1080 aaKnown RBP10.55□□□□□ -0.72
TFB4YPR056W NST1P53935 1240 aa10.5□□□□□ -0.73
TFB4YPR056W YDL129WQ07555 291 aa10.49□□□□□ -0.73
TFB4YPR056W SOL3P38858 249 aa10.48□□□□□ -0.73
TFB4YPR056W AI4P03878 556 aa10.44□□□□□ -0.74
TFB4YPR056W IFH1P39520 1085 aa10.44□□□□□ -0.74
TFB4YPR056W MPH3P0CE00 602 aa10.43□□□□□ -0.74
TFB4YPR056W YGR273CP53329 174 aa10.43□□□□□ -0.74
TFB4YPR056W SAP30P38429 201 aa10.4□□□□□ -0.74
TFB4YPR056W PML39Q03760 334 aa10.37□□□□□ -0.75
TFB4YPR056W YPR148CQ06523 435 aa10.34□□□□□ -0.75
TFB4YPR056W ILV3P39522 585 aaKnown RBP10.31□□□□□ -0.76
TFB4YPR056W CHL1P22516 861 aaPredicted RBP10.28□□□□□ -0.76
TFB4YPR056W PRE3P38624 215 aa10.27□□□□□ -0.77
TFB4YPR056W KEX1P09620 729 aa10.25□□□□□ -0.77
TFB4YPR056W MID1P41821 548 aa10.25□□□□□ -0.77
TFB4YPR056W UBP14P38237 781 aaKnown RBP10.24□□□□□ -0.77
TFB4YPR056W DMA1P38823 416 aa10.24□□□□□ -0.77
TFB4YPR056W ARH1P48360 493 aa10.22□□□□□ -0.77
TFB4YPR056W YLR326WQ06170 240 aaKnown RBP10.21□□□□□ -0.77
TFB4YPR056W SLI15P38283 698 aa10.2□□□□□ -0.78
TFB4YPR056W PEX29Q03370 554 aa10.19□□□□□ -0.78
TFB4YPR056W VHR2P40041 505 aa10.18□□□□□ -0.78
TFB4YPR056W REF2P42073 533 aaPredicted RBP10.17□□□□□ -0.78
TFB4YPR056W ELP4Q02884 456 aaKnown RBP10.17□□□□□ -0.78
TFB4YPR056W VPS70P47161 811 aa10.16□□□□□ -0.78
TFB4YPR056W MPC54Q08550 464 aa10.15□□□□□ -0.78
TFB4YPR056W RAD54P32863 898 aa10.13□□□□□ -0.79
TFB4YPR056W YDR344CQ05510 147 aa10.13□□□□□ -0.79
TFB4YPR056W HAP5Q02516 242 aa10.12□□□□□ -0.79
TFB4YPR056W DPL1Q05567 589 aa10.12□□□□□ -0.79
TFB4YPR056W PCS60P38137 543 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79 RIP-Chip
TFB4YPR056W SAS10Q12136 610 aaPredicted RBP10.11□□□□□ -0.79
TFB4YPR056W BCK2P33306 851 aa10.1□□□□□ -0.79
TFB4YPR056W SPT23P35210 1082 aa10.1□□□□□ -0.79
TFB4YPR056W CKB1P43639 278 aa10.1□□□□□ -0.79
TFB4YPR056W YDR090CQ03193 310 aa10.1□□□□□ -0.79
TFB4YPR056W MAK21Q12176 1025 aaKnown RBP10.1□□□□□ -0.79
TFB4YPR056W RPP1BP10622 106 aaKnown RBP10.07□□□□□ -0.8
TFB4YPR056W BNI4P53858 892 aa10.07□□□□□ -0.8
TFB4YPR056W KIC1P38692 1080 aa10.06□□□□□ -0.8
TFB4YPR056W NMA111P53920 997 aa10.06□□□□□ -0.8
TFB4YPR056W ISU2Q12056 156 aa10.04□□□□□ -0.8
TFB4YPR056W COX6P00427 148 aa10.03□□□□□ -0.8
TFB4YPR056W CDC73Q06697 393 aa10.02□□□□□ -0.81
TFB4YPR056W YML082WQ04533 649 aaKnown RBP10□□□□□ -0.81
TFB4YPR056W VRP1P37370 817 aa9.98□□□□□ -0.81
TFB4YPR056W PTC2P39966 464 aaKnown RBP9.97□□□□□ -0.81
TFB4YPR056W XDJ1P39102 459 aa9.95□□□□□ -0.82
TFB4YPR056W PBS2P08018 668 aa9.93□□□□□ -0.82
TFB4YPR056W GAP1P19145 602 aaPredicted RBP9.93□□□□□ -0.82
TFB4YPR056W CSC1Q06538 782 aa9.93□□□□□ -0.82
TFB4YPR056W LEO1P38439 464 aa9.9□□□□□ -0.82
TFB4YPR056W TFB4Q12004 338 aa9.9□□□□□ -0.82
TFB4YPR056W ORC6P38826 435 aa9.89□□□□□ -0.83
TFB4YPR056W DSF2P38213 736 aa9.87□□□□□ -0.83
TFB4YPR056W RAM1P22007 431 aa9.86□□□□□ -0.83
TFB4YPR056W PEX21P50091 288 aa9.86□□□□□ -0.83
TFB4YPR056W MAM3Q12296 706 aa9.82□□□□□ -0.84
TFB4YPR056W YPR015CQ12531 247 aa9.81□□□□□ -0.84
TFB4YPR056W PDR1P12383 1068 aa9.79□□□□□ -0.84
TFB4YPR056W MVP1P40959 511 aaKnown RBP9.79□□□□□ -0.84
TFB4YPR056W YRR1Q12172 810 aa9.79□□□□□ -0.84
TFB4YPR056W SPB4P25808 606 aaPredicted RBP9.77□□□□□ -0.85
TFB4YPR056W PSE1P32337 1089 aaKnown RBP9.77□□□□□ -0.85
TFB4YPR056W TUM1Q08686 304 aaKnown RBP9.77□□□□□ -0.85
TFB4YPR056W RGR1P19263 1082 aa9.76□□□□□ -0.85
TFB4YPR056W SAS4Q04003 481 aa9.73□□□□□ -0.85
TFB4YPR056W IES2P40154 320 aa9.72□□□□□ -0.85
TFB4YPR056W YPR109WQ06104 294 aa9.7□□□□□ -0.86
TFB4YPR056W NUD1P32336 851 aa9.69□□□□□ -0.86
TFB4YPR056W NUP42P49686 430 aaKnown RBP9.69□□□□□ -0.86
TFB4YPR056W GYP1Q08484 637 aa9.69□□□□□ -0.86
TFB4YPR056W CLB5P30283 435 aa9.67□□□□□ -0.86
TFB4YPR056W BUD20Q08004 166 aaPredicted RBP9.67□□□□□ -0.86
TFB4YPR056W STR2P47164 639 aa9.66□□□□□ -0.86
TFB4YPR056W DPS1P04802 557 aaKnown RBP9.65□□□□□ -0.86
TFB4YPR056W NPL4P33755 580 aa9.65□□□□□ -0.86
TFB4YPR056W ISM1P48526 1002 aa9.65□□□□□ -0.86
TFB4YPR056W PRT1P06103 763 aaKnown RBP9.64□□□□□ -0.87
TFB4YPR056W DIT2P21595 489 aa9.6□□□□□ -0.87
TFB4YPR056W MRF1P30775 413 aaPredicted RBP9.59□□□□□ -0.87
TFB4YPR056W GCD11P32481 527 aaKnown RBP9.55□□□□□ -0.88
TFB4YPR056W TEA1P47988 759 aa9.55□□□□□ -0.88
TFB4YPR056W TY1A-DR4O74302 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-HP0C2I4 478 aaKnown RBP9.53□□□□□ -0.88
TFB4YPR056W TY1A-AP0CX57 440 aa9.53□□□□□ -0.88
TFB4YPR056W TY1A-PR1P0CX58 440 aa9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms