RNA–Protein interactions for RNA: YPL194W

DDC1, Transcript of DNA damage checkpoint protein, yeastyeast

Gene DDC1, Length 1,839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDC1YPL194W TFB3Q03290 321 aa7.49□□□□□ -1.21
DDC1YPL194W PDR1P12383 1068 aa7.48□□□□□ -1.21
DDC1YPL194W RAM2P29703 316 aa7.46□□□□□ -1.21
DDC1YPL194W NAB3P38996 802 aaKnown RBP RIP-Chip data7.46□□□□□ -1.21not detected
DDC1YPL194W ALD4P46367 519 aaKnown RBP7.46□□□□□ -1.21
DDC1YPL194W FPR4Q06205 392 aaPredicted RBP7.46□□□□□ -1.21
DDC1YPL194W SSA4P22202 642 aaKnown RBP7.45□□□□□ -1.22
DDC1YPL194W NMD2P38798 1089 aaKnown RBP7.45□□□□□ -1.22
DDC1YPL194W UBX5Q06682 500 aa7.45□□□□□ -1.22
DDC1YPL194W DIT2P21595 489 aa7.43□□□□□ -1.22
DDC1YPL194W ZDS1P50111 915 aaKnown RBP7.42□□□□□ -1.22
DDC1YPL194W PKC1P24583 1151 aa7.41□□□□□ -1.22
DDC1YPL194W CDC3P32457 520 aaKnown RBP7.41□□□□□ -1.22
DDC1YPL194W TOA1P32773 286 aa7.41□□□□□ -1.22
DDC1YPL194W GLN1P32288 370 aaKnown RBP7.41□□□□□ -1.22
DDC1YPL194W NUP42P49686 430 aaKnown RBP7.41□□□□□ -1.22
DDC1YPL194W TOM20P35180 183 aa7.4□□□□□ -1.23
DDC1YPL194W BIM1P40013 344 aa7.4□□□□□ -1.23
DDC1YPL194W MAK21Q12176 1025 aaKnown RBP7.4□□□□□ -1.23
DDC1YPL194W KEX1P09620 729 aa7.39□□□□□ -1.23
DDC1YPL194W RSM7P47150 247 aa7.39□□□□□ -1.23
DDC1YPL194W ITT1Q04638 464 aa7.39□□□□□ -1.23
DDC1YPL194W IES2P40154 320 aa7.38□□□□□ -1.23
DDC1YPL194W CST6P40535 587 aa7.38□□□□□ -1.23
DDC1YPL194W CWC22P53333 577 aaKnown RBP7.38□□□□□ -1.23
DDC1YPL194W RPL34AP87262 121 aaPredicted RBP7.38□□□□□ -1.23
DDC1YPL194W ATG32P40458 529 aa7.37□□□□□ -1.23
DDC1YPL194W NNF1P47149 201 aa7.36□□□□□ -1.23
DDC1YPL194W HIF1Q12373 385 aa7.36□□□□□ -1.23
DDC1YPL194W PSD2P53037 1138 aaKnown RBP7.35□□□□□ -1.23
DDC1YPL194W KIP3P53086 805 aaKnown RBP7.35□□□□□ -1.23
DDC1YPL194W NOB1Q08444 459 aaKnown RBP7.34□□□□□ -1.23
DDC1YPL194W CPS1P27614 576 aa7.34□□□□□ -1.24
DDC1YPL194W ISW1P38144 1129 aa7.34□□□□□ -1.24
DDC1YPL194W YJL007CP47080 104 aa7.34□□□□□ -1.24
DDC1YPL194W RNH70P53331 553 aa7.34□□□□□ -1.24
DDC1YPL194W PMC1P38929 1173 aaPredicted RBP7.32□□□□□ -1.24
DDC1YPL194W ALD2P47771 506 aa7.32□□□□□ -1.24
DDC1YPL194W ATF2P53296 535 aa7.32□□□□□ -1.24
DDC1YPL194W BRE1Q07457 700 aaKnown RBP7.32□□□□□ -1.24
DDC1YPL194W HAT1Q12341 374 aa7.31□□□□□ -1.24
DDC1YPL194W TY4A-JP47023 414 aa7.31□□□□□ -1.24
DDC1YPL194W AIM21P40563 679 aa7.29□□□□□ -1.24
DDC1YPL194W GAL11P19659 1081 aa7.29□□□□□ -1.24
DDC1YPL194W TSR4P25040 408 aa7.29□□□□□ -1.24
DDC1YPL194W ERG12P07277 443 aa7.28□□□□□ -1.24
DDC1YPL194W EBP2P36049 427 aaKnown RBP7.28□□□□□ -1.24
DDC1YPL194W TTI1P36097 1038 aa7.28□□□□□ -1.24
DDC1YPL194W IPL1P38991 367 aa7.28□□□□□ -1.24
DDC1YPL194W TPM2P40414 161 aa7.28□□□□□ -1.24
DDC1YPL194W RLP24Q07915 199 aaKnown RBP7.28□□□□□ -1.24
DDC1YPL194W TIF1P10081 395 aaKnown RBP7.27□□□□□ -1.25
DDC1YPL194W RRP14P36080 434 aaKnown RBP7.27□□□□□ -1.25
DDC1YPL194W YOL098CQ12496 1037 aa7.26□□□□□ -1.25
DDC1YPL194W FPR3P38911 411 aaKnown RBP7.25□□□□□ -1.25
DDC1YPL194W RRP15Q06511 250 aaPredicted RBP7.25□□□□□ -1.25
DDC1YPL194W RAD2P07276 1031 aa7.24□□□□□ -1.25
DDC1YPL194W RPA135P22138 1203 aaKnown RBP7.24□□□□□ -1.25
DDC1YPL194W RPT2P40327 437 aaKnown RBP7.24□□□□□ -1.25
DDC1YPL194W MAK16P10962 306 aaPredicted RBP7.23□□□□□ -1.25
DDC1YPL194W PPG1P32838 368 aa7.23□□□□□ -1.25
DDC1YPL194W YDL121CQ07541 149 aa7.23□□□□□ -1.25
DDC1YPL194W SSA2P10592 639 aaKnown RBP7.22□□□□□ -1.25
DDC1YPL194W STM1P39015 273 aaKnown RBP7.22□□□□□ -1.25
DDC1YPL194W RPL34BP40525 121 aaKnown RBP7.22□□□□□ -1.25
DDC1YPL194W REF2P42073 533 aaPredicted RBP7.22□□□□□ -1.25
DDC1YPL194W GIR2Q03768 265 aaPredicted RBP7.22□□□□□ -1.25
DDC1YPL194W SVF1Q05515 481 aa7.22□□□□□ -1.25
DDC1YPL194W SSB1P11484 613 aaKnown RBP7.22□□□□□ -1.25
DDC1YPL194W SSB2P40150 613 aaKnown RBP7.22□□□□□ -1.25
DDC1YPL194W YML083CQ04526 418 aa7.22□□□□□ -1.25
DDC1YPL194W YOL057WQ08225 711 aa7.22□□□□□ -1.25
DDC1YPL194W NOP53Q12080 455 aaKnown RBP7.22□□□□□ -1.25
DDC1YPL194W RPS0AP32905 252 aaKnown RBP7.21□□□□□ -1.26
DDC1YPL194W MPE1P35728 441 aaKnown RBP7.21□□□□□ -1.26
DDC1YPL194W TFG1P41895 735 aaPredicted RBP7.21□□□□□ -1.26
DDC1YPL194W VMA4P22203 233 aaKnown RBP7.2□□□□□ -1.26
DDC1YPL194W BOI2P39969 1040 aa7.2□□□□□ -1.26
DDC1YPL194W YPR204WQ08995 1032 aa7.2□□□□□ -1.26
DDC1YPL194W SEC20P28791 383 aa7.19□□□□□ -1.26
DDC1YPL194W BIO2P32451 375 aa7.19□□□□□ -1.26
DDC1YPL194W ERP2P39704 215 aa7.19□□□□□ -1.26
DDC1YPL194W NOP2P40991 618 aaKnown RBP7.19□□□□□ -1.26
DDC1YPL194W ATE1P16639 503 aa7.18□□□□□ -1.26
DDC1YPL194W RCR1P38212 213 aa7.18□□□□□ -1.26
DDC1YPL194W TMA64Q04600 565 aaKnown RBP7.18□□□□□ -1.26
DDC1YPL194W MAG2Q06436 670 aaKnown RBP7.18□□□□□ -1.26
DDC1YPL194W PUP1P25043 261 aa7.17□□□□□ -1.26
DDC1YPL194W ALG12P53730 551 aa7.17□□□□□ -1.26
DDC1YPL194W AI2P03876 854 aa7.17□□□□□ -1.26
DDC1YPL194W CIT2P08679 460 aa7.17□□□□□ -1.26
DDC1YPL194W MAK11P20484 414 aaKnown RBP7.17□□□□□ -1.26
DDC1YPL194W CSN12P47130 423 aa7.17□□□□□ -1.26
DDC1YPL194W ECM16Q04217 1267 aaKnown RBP7.16□□□□□ -1.26
DDC1YPL194W RTG2P32608 588 aaKnown RBP7.15□□□□□ -1.26
DDC1YPL194W GRX4P32642 244 aa7.15□□□□□ -1.26
DDC1YPL194W COX6P00427 148 aa7.15□□□□□ -1.27
DDC1YPL194W POL5P39985 1022 aaKnown RBP7.15□□□□□ -1.27
DDC1YPL194W MPP10P47083 593 aaKnown RBP7.15□□□□□ -1.27
DDC1YPL194W MSC6Q08818 692 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 135.5 ms