RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C EDS1P38073 919 aa4.13□□□□□ -1.75
NIP100YPL174C GUT1P32190 709 aa4.12□□□□□ -1.75
NIP100YPL174C NCR1Q12200 1170 aa4.12□□□□□ -1.75
NIP100YPL174C JIP4Q03361 876 aa4.11□□□□□ -1.75
NIP100YPL174C PEX29Q03370 554 aa4.11□□□□□ -1.75
NIP100YPL174C BMT6Q12291 365 aa4.11□□□□□ -1.75
NIP100YPL174C YEL023CP39992 682 aa4.1□□□□□ -1.75
NIP100YPL174C FKH1P40466 484 aa4.1□□□□□ -1.75
NIP100YPL174C IOC2Q12072 812 aa4.1□□□□□ -1.75
NIP100YPL174C SEC61P32915 480 aa4.08□□□□□ -1.76
NIP100YPL174C SAP30P38429 201 aa4.08□□□□□ -1.76
NIP100YPL174C IFH1P39520 1085 aa4.08□□□□□ -1.76
NIP100YPL174C PTC4P38089 393 aa4.07□□□□□ -1.76
NIP100YPL174C AIR2Q12476 344 aaKnown RBP4.07□□□□□ -1.76
NIP100YPL174C VPS70P47161 811 aa4.06□□□□□ -1.76
NIP100YPL174C NOP53Q12080 455 aaKnown RBP4.06□□□□□ -1.76
NIP100YPL174C KIC1P38692 1080 aa4.05□□□□□ -1.76
NIP100YPL174C YDL129WQ07555 291 aa4.05□□□□□ -1.76
NIP100YPL174C PML39Q03760 334 aa4.04□□□□□ -1.76
NIP100YPL174C ELP4Q02884 456 aaKnown RBP4.04□□□□□ -1.76
NIP100YPL174C VHR2P40041 505 aa4.03□□□□□ -1.76
NIP100YPL174C RPP1BP10622 106 aaKnown RBP4.01□□□□□ -1.77
NIP100YPL174C YGR273CP53329 174 aa4.01□□□□□ -1.77
NIP100YPL174C RAD54P32863 898 aa4□□□□□ -1.77
NIP100YPL174C DAN4P47179 1161 aa3.99□□□□□ -1.77
NIP100YPL174C MPH3P0CE00 602 aa3.99□□□□□ -1.77
NIP100YPL174C AI4P03878 556 aa3.98□□□□□ -1.77
NIP100YPL174C MID1P41821 548 aa3.98□□□□□ -1.77
NIP100YPL174C REF2P42073 533 aaPredicted RBP3.98□□□□□ -1.77
NIP100YPL174C SPB4P25808 606 aaPredicted RBP3.97□□□□□ -1.77
NIP100YPL174C KEX1P09620 729 aa3.96□□□□□ -1.77
NIP100YPL174C SOL3P38858 249 aa3.96□□□□□ -1.78
NIP100YPL174C PEX21P50091 288 aa3.96□□□□□ -1.78
NIP100YPL174C CKB1P43639 278 aa3.95□□□□□ -1.78
NIP100YPL174C CHL1P22516 861 aaPredicted RBP3.93□□□□□ -1.78
NIP100YPL174C ILV3P39522 585 aaKnown RBP3.93□□□□□ -1.78
NIP100YPL174C PRE3P38624 215 aa3.93□□□□□ -1.78
NIP100YPL174C YLR326WQ06170 240 aaKnown RBP3.93□□□□□ -1.78
NIP100YPL174C SLI15P38283 698 aa3.92□□□□□ -1.78
NIP100YPL174C DPL1Q05567 589 aa3.92□□□□□ -1.78
NIP100YPL174C YPR148CQ06523 435 aa3.92□□□□□ -1.78
NIP100YPL174C HAP5Q02516 242 aa3.91□□□□□ -1.78
NIP100YPL174C PBS2P08018 668 aa3.91□□□□□ -1.78
NIP100YPL174C MPC54Q08550 464 aa3.91□□□□□ -1.78
NIP100YPL174C SPT23P35210 1082 aa3.91□□□□□ -1.78
NIP100YPL174C PTC2P39966 464 aaKnown RBP3.91□□□□□ -1.78
NIP100YPL174C UBP14P38237 781 aaKnown RBP3.9□□□□□ -1.79
NIP100YPL174C MAK21Q12176 1025 aaKnown RBP3.9□□□□□ -1.79
NIP100YPL174C NMA111P53920 997 aa3.9□□□□□ -1.79
NIP100YPL174C CDC73Q06697 393 aa3.9□□□□□ -1.79
NIP100YPL174C BCK2P33306 851 aa3.89□□□□□ -1.79
NIP100YPL174C ARH1P48360 493 aa3.89□□□□□ -1.79
NIP100YPL174C PCS60P38137 543 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79 RIP-Chip
NIP100YPL174C NST1P53935 1240 aa3.89□□□□□ -1.79
NIP100YPL174C ISU2Q12056 156 aa3.88□□□□□ -1.79
NIP100YPL174C MAM3Q12296 706 aa3.88□□□□□ -1.79
NIP100YPL174C VRP1P37370 817 aa3.87□□□□□ -1.79
NIP100YPL174C NPL4P33755 580 aa3.87□□□□□ -1.79
NIP100YPL174C IES2P40154 320 aa3.86□□□□□ -1.79
NIP100YPL174C COX6P00427 148 aa3.85□□□□□ -1.79
NIP100YPL174C YDR344CQ05510 147 aa3.85□□□□□ -1.79
NIP100YPL174C YRR1Q12172 810 aa3.85□□□□□ -1.79
NIP100YPL174C BNI4P53858 892 aa3.84□□□□□ -1.79
NIP100YPL174C CSC1Q06538 782 aa3.84□□□□□ -1.79
NIP100YPL174C GYP1Q08484 637 aa3.84□□□□□ -1.79
NIP100YPL174C YDR090CQ03193 310 aa3.84□□□□□ -1.8
NIP100YPL174C TUM1Q08686 304 aaKnown RBP3.84□□□□□ -1.8
NIP100YPL174C SAS10Q12136 610 aaPredicted RBP3.83□□□□□ -1.8
NIP100YPL174C TFB4Q12004 338 aa3.82□□□□□ -1.8
NIP100YPL174C YPR109WQ06104 294 aa3.81□□□□□ -1.8
NIP100YPL174C PDR1P12383 1068 aa3.8□□□□□ -1.8
NIP100YPL174C ATF2P53296 535 aa3.8□□□□□ -1.8
NIP100YPL174C GCD11P32481 527 aaKnown RBP3.79□□□□□ -1.8
NIP100YPL174C YMR196WQ04336 1088 aa3.79□□□□□ -1.8
NIP100YPL174C NUD1P32336 851 aa3.78□□□□□ -1.8
NIP100YPL174C ORC6P38826 435 aa3.78□□□□□ -1.8
NIP100YPL174C DSF2P38213 736 aa3.78□□□□□ -1.8
NIP100YPL174C XDJ1P39102 459 aa3.78□□□□□ -1.8
NIP100YPL174C CLB5P30283 435 aa3.77□□□□□ -1.81
NIP100YPL174C YML082WQ04533 649 aaKnown RBP3.77□□□□□ -1.81
NIP100YPL174C PAT1P25644 796 aaKnown RBP3.76□□□□□ -1.81
NIP100YPL174C PSE1P32337 1089 aaKnown RBP3.76□□□□□ -1.81
NIP100YPL174C MVP1P40959 511 aaKnown RBP3.76□□□□□ -1.81
NIP100YPL174C TEA1P47988 759 aa3.76□□□□□ -1.81
NIP100YPL174C DPS1P04802 557 aaKnown RBP3.74□□□□□ -1.81
NIP100YPL174C RGR1P19263 1082 aa3.74□□□□□ -1.81
NIP100YPL174C SPT16P32558 1035 aaKnown RBP3.74□□□□□ -1.81
NIP100YPL174C YEL077CQ3E7X8 1277 aa3.74□□□□□ -1.81
NIP100YPL174C PRT1P06103 763 aaKnown RBP3.74□□□□□ -1.81
NIP100YPL174C ERG12P07277 443 aa3.74□□□□□ -1.81
NIP100YPL174C DIT2P21595 489 aa3.74□□□□□ -1.81
NIP100YPL174C MRF1P30775 413 aaPredicted RBP3.74□□□□□ -1.81
NIP100YPL174C GLC3P32775 704 aa3.74□□□□□ -1.81
NIP100YPL174C ISM1P48526 1002 aa3.74□□□□□ -1.81
NIP100YPL174C SAS4Q04003 481 aa3.73□□□□□ -1.81
NIP100YPL174C KEX2P13134 814 aa3.72□□□□□ -1.81
NIP100YPL174C YPR015CQ12531 247 aa3.72□□□□□ -1.81
NIP100YPL174C RRN7P40992 514 aa3.71□□□□□ -1.82
NIP100YPL174C NUP42P49686 430 aaKnown RBP3.71□□□□□ -1.82
NIP100YPL174C YNR021WP53723 404 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms