RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeastyeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS30YPL120W DAN4P47179 1161 aa8.49□□□□□ -1.05
VPS30YPL120W MAK11P20484 414 aaKnown RBP8.48□□□□□ -1.05
VPS30YPL120W RAM2P29703 316 aa8.48□□□□□ -1.05
VPS30YPL120W YEL023CP39992 682 aa8.46□□□□□ -1.05
VPS30YPL120W GRE2Q12068 342 aaKnown RBP8.46□□□□□ -1.05
VPS30YPL120W PTC4P38089 393 aa8.45□□□□□ -1.06
VPS30YPL120W SAP30P38429 201 aa8.45□□□□□ -1.06
VPS30YPL120W YDL129WQ07555 291 aa8.42□□□□□ -1.06
VPS30YPL120W ATH1P48016 1211 aa8.4□□□□□ -1.06
VPS30YPL120W PTC3P34221 468 aaKnown RBP8.39□□□□□ -1.07
VPS30YPL120W EDS1P38073 919 aa8.39□□□□□ -1.07
VPS30YPL120W COQ8P27697 501 aa8.37□□□□□ -1.07
VPS30YPL120W GUT1P32190 709 aa8.37□□□□□ -1.07
VPS30YPL120W CHL1P22516 861 aaPredicted RBP8.3□□□□□ -1.08
VPS30YPL120W PML39Q03760 334 aa8.3□□□□□ -1.08
VPS30YPL120W PRE3P38624 215 aa8.3□□□□□ -1.08
VPS30YPL120W BCK2P33306 851 aa8.25□□□□□ -1.09
VPS30YPL120W NST1P53935 1240 aa8.22□□□□□ -1.09
VPS30YPL120W SOL3P38858 249 aa8.21□□□□□ -1.09
VPS30YPL120W ELP4Q02884 456 aaKnown RBP8.21□□□□□ -1.09
VPS30YPL120W NOP53Q12080 455 aaKnown RBP8.21□□□□□ -1.1
VPS30YPL120W MID1P41821 548 aa8.19□□□□□ -1.1
VPS30YPL120W YDR344CQ05510 147 aa8.19□□□□□ -1.1
VPS30YPL120W AI4P03878 556 aa8.18□□□□□ -1.1
VPS30YPL120W MPH3P0CE00 602 aa8.18□□□□□ -1.1
VPS30YPL120W PEX29Q03370 554 aa8.17□□□□□ -1.1
VPS30YPL120W DNA2P38859 1522 aa8.15□□□□□ -1.11
VPS30YPL120W YGR273CP53329 174 aa8.14□□□□□ -1.11
VPS30YPL120W VRP1P37370 817 aa8.13□□□□□ -1.11
VPS30YPL120W ARH1P48360 493 aa8.13□□□□□ -1.11
VPS30YPL120W ILV3P39522 585 aaKnown RBP8.12□□□□□ -1.11
VPS30YPL120W SET1P38827 1080 aaKnown RBP8.07□□□□□ -1.12
VPS30YPL120W SPT23P35210 1082 aa8.05□□□□□ -1.12
VPS30YPL120W HAP5Q02516 242 aa8.05□□□□□ -1.12
VPS30YPL120W XDJ1P39102 459 aa8.05□□□□□ -1.12
VPS30YPL120W MPC54Q08550 464 aa8.02□□□□□ -1.13
VPS30YPL120W SLI15P38283 698 aa8.02□□□□□ -1.13
VPS30YPL120W BNI4P53858 892 aa7.98□□□□□ -1.13
VPS30YPL120W KEX1P09620 729 aa7.98□□□□□ -1.13
VPS30YPL120W NMA111P53920 997 aa7.98□□□□□ -1.13
VPS30YPL120W PTC2P39966 464 aaKnown RBP7.97□□□□□ -1.13
VPS30YPL120W KOG1P38873 1557 aa7.97□□□□□ -1.13
VPS30YPL120W DPL1Q05567 589 aa7.96□□□□□ -1.13
VPS30YPL120W VHR2P40041 505 aa7.92□□□□□ -1.14
VPS30YPL120W YML082WQ04533 649 aaKnown RBP7.92□□□□□ -1.14
VPS30YPL120W DPS1P04802 557 aaKnown RBP7.91□□□□□ -1.14
VPS30YPL120W YLR326WQ06170 240 aaKnown RBP7.91□□□□□ -1.14
VPS30YPL120W UBP14P38237 781 aaKnown RBP7.89□□□□□ -1.15
VPS30YPL120W CDC73Q06697 393 aa7.88□□□□□ -1.15
VPS30YPL120W ISU2Q12056 156 aa7.88□□□□□ -1.15
VPS30YPL120W SWR1Q05471 1514 aa7.87□□□□□ -1.15
VPS30YPL120W RAD54P32863 898 aa7.86□□□□□ -1.15
VPS30YPL120W IFH1P39520 1085 aa7.86□□□□□ -1.15
VPS30YPL120W PCS60P38137 543 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
VPS30YPL120W RPP1BP10622 106 aaKnown RBP7.82□□□□□ -1.16
VPS30YPL120W KIC1P38692 1080 aa7.8□□□□□ -1.16
VPS30YPL120W YPR015CQ12531 247 aa7.79□□□□□ -1.16
VPS30YPL120W RAM1P22007 431 aa7.77□□□□□ -1.17
VPS30YPL120W SPA2P23201 1466 aaKnown RBP7.77□□□□□ -1.17
VPS30YPL120W YDR090CQ03193 310 aa7.76□□□□□ -1.17
VPS30YPL120W PDR1P12383 1068 aa7.76□□□□□ -1.17
VPS30YPL120W GYP1Q08484 637 aa7.76□□□□□ -1.17
VPS30YPL120W REF2P42073 533 aaPredicted RBP7.75□□□□□ -1.17
VPS30YPL120W YPR148CQ06523 435 aa7.75□□□□□ -1.17
VPS30YPL120W VPS70P47161 811 aa7.73□□□□□ -1.17
VPS30YPL120W PEX21P50091 288 aa7.73□□□□□ -1.17
VPS30YPL120W YRR1Q12172 810 aa7.67□□□□□ -1.18
VPS30YPL120W RAS1P01119 309 aa7.67□□□□□ -1.18
VPS30YPL120W SAS4Q04003 481 aa7.67□□□□□ -1.18
VPS30YPL120W CSC1Q06538 782 aa7.66□□□□□ -1.18
VPS30YPL120W SRC1Q03707 834 aa7.65□□□□□ -1.18
VPS30YPL120W TUM1Q08686 304 aaKnown RBP7.63□□□□□ -1.19
VPS30YPL120W TFB4Q12004 338 aa7.63□□□□□ -1.19
VPS30YPL120W GAP1P19145 602 aaPredicted RBP7.63□□□□□ -1.19
VPS30YPL120W MAK21Q12176 1025 aaKnown RBP7.63□□□□□ -1.19
VPS30YPL120W AMS1P22855 1083 aa7.62□□□□□ -1.19
VPS30YPL120W COX6P00427 148 aa7.61□□□□□ -1.19
VPS30YPL120W ORC6P38826 435 aa7.6□□□□□ -1.19
VPS30YPL120W BUD20Q08004 166 aaPredicted RBP7.6□□□□□ -1.19
VPS30YPL120W PRT1P06103 763 aaKnown RBP7.58□□□□□ -1.2
VPS30YPL120W NUD1P32336 851 aa7.58□□□□□ -1.2
VPS30YPL120W MRF1P30775 413 aaPredicted RBP7.57□□□□□ -1.2
VPS30YPL120W NPL4P33755 580 aa7.57□□□□□ -1.2
VPS30YPL120W STR2P47164 639 aa7.57□□□□□ -1.2
VPS30YPL120W YEL077CQ3E7X8 1277 aa7.57□□□□□ -1.2
VPS30YPL120W SDH2P21801 266 aa7.57□□□□□ -1.2
VPS30YPL120W ISM1P48526 1002 aa7.57□□□□□ -1.2
VPS30YPL120W MVP1P40959 511 aaKnown RBP7.54□□□□□ -1.2
VPS30YPL120W CKB1P43639 278 aa7.52□□□□□ -1.21
VPS30YPL120W GCD11P32481 527 aaKnown RBP7.51□□□□□ -1.21
VPS30YPL120W TRK1P12685 1235 aa7.51□□□□□ -1.21
VPS30YPL120W ERG12P07277 443 aa7.5□□□□□ -1.21
VPS30YPL120W PBS2P08018 668 aa7.5□□□□□ -1.21
VPS30YPL120W YPR109WQ06104 294 aa7.5□□□□□ -1.21
VPS30YPL120W RGR1P19263 1082 aa7.49□□□□□ -1.21
VPS30YPL120W TY1B-DR4Q07793 1604 aa7.49□□□□□ -1.21
VPS30YPL120W TCB3Q03640 1545 aaKnown RBP7.47□□□□□ -1.21
VPS30YPL120W SPT16P32558 1035 aaKnown RBP7.47□□□□□ -1.21
VPS30YPL120W TY1A-DR4O74302 440 aa7.45□□□□□ -1.22
VPS30YPL120W TY1A-HP0C2I4 478 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms