RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	PTC4	P38089	393 aa		8.06	□□□□□ -1.12
LEE1	YPL054W	GRE2	Q12068	342 aa	Known RBP	8.06	□□□□□ -1.12
LEE1	YPL054W	MIF2	P35201	549 aa		8.05	□□□□□ -1.12
LEE1	YPL054W	YEL023C	P39992	682 aa		8.05	□□□□□ -1.12
LEE1	YPL054W	SAP30	P38429	201 aa		8.01	□□□□□ -1.13
LEE1	YPL054W	YDL129W	Q07555	291 aa		8.01	□□□□□ -1.13
LEE1	YPL054W	ATH1	P48016	1211 aa		8	□□□□□ -1.13
LEE1	YPL054W	PTC3	P34221	468 aa	Known RBP	7.99	□□□□□ -1.13
LEE1	YPL054W	GUT1	P32190	709 aa		7.98	□□□□□ -1.13
LEE1	YPL054W	EDS1	P38073	919 aa		7.97	□□□□□ -1.13
LEE1	YPL054W	COQ8	P27697	501 aa		7.95	□□□□□ -1.14
LEE1	YPL054W	CHL1	P22516	861 aa	Predicted RBP	7.92	□□□□□ -1.14
LEE1	YPL054W	PRE3	P38624	215 aa		7.9	□□□□□ -1.14
LEE1	YPL054W	NOP53	Q12080	455 aa	Known RBP	7.89	□□□□□ -1.15
LEE1	YPL054W	PML39	Q03760	334 aa		7.88	□□□□□ -1.15
LEE1	YPL054W	BCK2	P33306	851 aa		7.85	□□□□□ -1.15
LEE1	YPL054W	NST1	P53935	1240 aa		7.83	□□□□□ -1.16
LEE1	YPL054W	AI4	P03878	556 aa		7.81	□□□□□ -1.16
LEE1	YPL054W	MPH3	P0CE00	602 aa		7.8	□□□□□ -1.16
LEE1	YPL054W	SOL3	P38858	249 aa		7.8	□□□□□ -1.16
LEE1	YPL054W	ELP4	Q02884	456 aa	Known RBP	7.8	□□□□□ -1.16
LEE1	YPL054W	MID1	P41821	548 aa		7.76	□□□□□ -1.17
LEE1	YPL054W	ARH1	P48360	493 aa		7.76	□□□□□ -1.17
LEE1	YPL054W	YGR273C	P53329	174 aa		7.76	□□□□□ -1.17
LEE1	YPL054W	PEX29	Q03370	554 aa		7.76	□□□□□ -1.17
LEE1	YPL054W	VRP1	P37370	817 aa		7.72	□□□□□ -1.17
LEE1	YPL054W	YDR344C	Q05510	147 aa		7.72	□□□□□ -1.17
LEE1	YPL054W	SPT23	P35210	1082 aa		7.69	□□□□□ -1.18
LEE1	YPL054W	SET1	P38827	1080 aa	Known RBP	7.69	□□□□□ -1.18
LEE1	YPL054W	XDJ1	P39102	459 aa		7.69	□□□□□ -1.18
LEE1	YPL054W	ILV3	P39522	585 aa	Known RBP	7.69	□□□□□ -1.18
LEE1	YPL054W	HAP5	Q02516	242 aa		7.67	□□□□□ -1.18
LEE1	YPL054W	MPC54	Q08550	464 aa		7.63	□□□□□ -1.19
LEE1	YPL054W	SLI15	P38283	698 aa		7.62	□□□□□ -1.19
LEE1	YPL054W	BNI4	P53858	892 aa		7.62	□□□□□ -1.19
LEE1	YPL054W	KEX1	P09620	729 aa		7.6	□□□□□ -1.19
LEE1	YPL054W	PTC2	P39966	464 aa	Known RBP	7.59	□□□□□ -1.19
LEE1	YPL054W	NMA111	P53920	997 aa		7.59	□□□□□ -1.19
LEE1	YPL054W	DPL1	Q05567	589 aa		7.59	□□□□□ -1.19
LEE1	YPL054W	IFH1	P39520	1085 aa		7.57	□□□□□ -1.2
LEE1	YPL054W	YML082W	Q04533	649 aa	Known RBP	7.57	□□□□□ -1.2
LEE1	YPL054W	UBP14	P38237	781 aa	Known RBP	7.53	□□□□□ -1.2
LEE1	YPL054W	VHR2	P40041	505 aa		7.53	□□□□□ -1.2
LEE1	YPL054W	YLR326W	Q06170	240 aa	Known RBP	7.53	□□□□□ -1.2
LEE1	YPL054W	ISU2	Q12056	156 aa		7.52	□□□□□ -1.21
LEE1	YPL054W	DPS1	P04802	557 aa	Known RBP	7.51	□□□□□ -1.21
LEE1	YPL054W	RPP1B	P10622	106 aa	Known RBP	7.51	□□□□□ -1.21
LEE1	YPL054W	RAD54	P32863	898 aa		7.5	□□□□□ -1.21
LEE1	YPL054W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.47	□□□□□ -1.21	not detected
LEE1	YPL054W	CDC73	Q06697	393 aa		7.47	□□□□□ -1.21
LEE1	YPL054W	KIC1	P38692	1080 aa		7.45	□□□□□ -1.22
LEE1	YPL054W	YPR148C	Q06523	435 aa		7.42	□□□□□ -1.22
LEE1	YPL054W	RAM1	P22007	431 aa		7.4	□□□□□ -1.22
LEE1	YPL054W	REF2	P42073	533 aa	Predicted RBP	7.4	□□□□□ -1.22
LEE1	YPL054W	YDR090C	Q03193	310 aa		7.39	□□□□□ -1.23
LEE1	YPL054W	GYP1	Q08484	637 aa		7.38	□□□□□ -1.23
LEE1	YPL054W	YPR015C	Q12531	247 aa		7.38	□□□□□ -1.23
LEE1	YPL054W	PEX21	P50091	288 aa		7.36	□□□□□ -1.23
LEE1	YPL054W	PDR1	P12383	1068 aa		7.35	□□□□□ -1.23
LEE1	YPL054W	VPS70	P47161	811 aa		7.35	□□□□□ -1.23
LEE1	YPL054W	SAS4	Q04003	481 aa		7.34	□□□□□ -1.23
LEE1	YPL054W	CSC1	Q06538	782 aa		7.33	□□□□□ -1.24
LEE1	YPL054W	MAK21	Q12176	1025 aa	Known RBP	7.32	□□□□□ -1.24
LEE1	YPL054W	TFB4	Q12004	338 aa		7.31	□□□□□ -1.24
LEE1	YPL054W	YRR1	Q12172	810 aa		7.3	□□□□□ -1.24
LEE1	YPL054W	COX6	P00427	148 aa		7.29	□□□□□ -1.24
LEE1	YPL054W	GAP1	P19145	602 aa	Predicted RBP	7.29	□□□□□ -1.24
LEE1	YPL054W	RAS1	P01119	309 aa		7.26	□□□□□ -1.25
LEE1	YPL054W	AMS1	P22855	1083 aa		7.26	□□□□□ -1.25
LEE1	YPL054W	SRC1	Q03707	834 aa		7.26	□□□□□ -1.25
LEE1	YPL054W	TUM1	Q08686	304 aa	Known RBP	7.26	□□□□□ -1.25
LEE1	YPL054W	MRF1	P30775	413 aa	Predicted RBP	7.25	□□□□□ -1.25
LEE1	YPL054W	ORC6	P38826	435 aa		7.25	□□□□□ -1.25
LEE1	YPL054W	PRT1	P06103	763 aa	Known RBP	7.23	□□□□□ -1.25
LEE1	YPL054W	NPL4	P33755	580 aa		7.23	□□□□□ -1.25
LEE1	YPL054W	CKB1	P43639	278 aa		7.23	□□□□□ -1.25
LEE1	YPL054W	BUD20	Q08004	166 aa	Predicted RBP	7.23	□□□□□ -1.25
LEE1	YPL054W	YEL077C	Q3E7X8	1277 aa		7.23	□□□□□ -1.25
LEE1	YPL054W	NUD1	P32336	851 aa		7.22	□□□□□ -1.25
LEE1	YPL054W	RGA2	Q06407	1009 aa		7.22	□□□□□ -1.25
LEE1	YPL054W	STR2	P47164	639 aa		7.2	□□□□□ -1.26
LEE1	YPL054W	MVP1	P40959	511 aa	Known RBP	7.19	□□□□□ -1.26
LEE1	YPL054W	ISM1	P48526	1002 aa		7.19	□□□□□ -1.26
LEE1	YPL054W	SDH2	P21801	266 aa		7.18	□□□□□ -1.26
LEE1	YPL054W	ERG12	P07277	443 aa		7.16	□□□□□ -1.26
LEE1	YPL054W	PBS2	P08018	668 aa		7.16	□□□□□ -1.26
LEE1	YPL054W	TRK1	P12685	1235 aa		7.15	□□□□□ -1.26
LEE1	YPL054W	RGR1	P19263	1082 aa		7.15	□□□□□ -1.26
LEE1	YPL054W	RGA1	P39083	1007 aa		7.15	□□□□□ -1.26
LEE1	YPL054W	GCD11	P32481	527 aa	Known RBP	7.14	□□□□□ -1.27
LEE1	YPL054W	YPR109W	Q06104	294 aa		7.14	□□□□□ -1.27
LEE1	YPL054W	SPT16	P32558	1035 aa	Known RBP	7.12	□□□□□ -1.27
LEE1	YPL054W	PAT1	P25644	796 aa	Known RBP	7.09	□□□□□ -1.27
LEE1	YPL054W	PSE1	P32337	1089 aa	Known RBP	7.09	□□□□□ -1.27
LEE1	YPL054W	DMA1	P38823	416 aa		7.09	□□□□□ -1.27
LEE1	YPL054W	MAM3	Q12296	706 aa		7.09	□□□□□ -1.27
LEE1	YPL054W	TY1A-DR4	O74302	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-H	P0C2I4	478 aa	Known RBP	7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-A	P0CX57	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-PR1	P0CX58	440 aa		7.08	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms