RNA–Protein interactions for RNA: YOR348C

PUT4, Transcript of Proline permease, yeast

Gene PUT4, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUT4	YOR348C	TY1B-MR2	Q04670	1755 aa	Known RBP	20.1	■□□□□ 0.81
PUT4	YOR348C	TY1B-LR1	Q12088	1755 aa	Known RBP	20.1	■□□□□ 0.81
PUT4	YOR348C	TY1B-NL1	Q12112	1755 aa		20.1	■□□□□ 0.81
PUT4	YOR348C	TY1B-GR1	Q12141	1755 aa		20.1	■□□□□ 0.81
PUT4	YOR348C	TY1B-BL	Q12490	1755 aa		20.1	■□□□□ 0.81
PUT4	YOR348C	ESC1	Q03661	1658 aa	Known RBP	20.09	■□□□□ 0.81
PUT4	YOR348C	VPS15	P22219	1454 aa		19.95	■□□□□ 0.78
PUT4	YOR348C	RTT106	P40161	455 aa		19.94	■□□□□ 0.78
PUT4	YOR348C	YBT1	P32386	1661 aa		19.92	■□□□□ 0.78
PUT4	YOR348C	GEA2	P39993	1459 aa	Known RBP	19.92	■□□□□ 0.78
PUT4	YOR348C	DNF1	P32660	1571 aa		19.92	■□□□□ 0.78
PUT4	YOR348C	RPA190	P10964	1664 aa	Known RBP	19.9	■□□□□ 0.78
PUT4	YOR348C	NTE1	Q04958	1679 aa		19.9	■□□□□ 0.78
PUT4	YOR348C	IRC20	Q06554	1556 aa		19.89	■□□□□ 0.77
PUT4	YOR348C	RPO21	P04050	1733 aa	Known RBP	19.85	■□□□□ 0.77
PUT4	YOR348C	CAT8	P39113	1433 aa		19.83	■□□□□ 0.77
PUT4	YOR348C	MTC1	P47018	478 aa	Known RBP	19.75	■□□□□ 0.75
PUT4	YOR348C	NUP159	P40477	1460 aa		19.72	■□□□□ 0.75
PUT4	YOR348C	GDB1	Q06625	1536 aa		19.71	■□□□□ 0.75
PUT4	YOR348C	SRB8	P25648	1427 aa		19.66	■□□□□ 0.74
PUT4	YOR348C	ARO1	P08566	1588 aa	Known RBP	19.64	■□□□□ 0.73
PUT4	YOR348C	PDR10	P51533	1564 aa		19.62	■□□□□ 0.73
PUT4	YOR348C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	19.61	■□□□□ 0.73	not detected
PUT4	YOR348C	POL5	P39985	1022 aa	Known RBP	19.6	■□□□□ 0.73
PUT4	YOR348C	CKB1	P43639	278 aa		19.6	■□□□□ 0.73
PUT4	YOR348C	MET10	P39692	1035 aa		19.56	■□□□□ 0.72
PUT4	YOR348C	PDR12	Q02785	1511 aa		19.56	■□□□□ 0.72
PUT4	YOR348C	SPO14	P36126	1683 aa		19.53	■□□□□ 0.72
PUT4	YOR348C	NUP157	P40064	1391 aa	Known RBP	19.52	■□□□□ 0.72
PUT4	YOR348C	YRF1-1	P0CX20	1796 aa		19.47	■□□□□ 0.71
PUT4	YOR348C	YRF1-5	P0CX21	1796 aa		19.47	■□□□□ 0.71
PUT4	YOR348C	YRF1-8	P0CX22	1796 aa		19.47	■□□□□ 0.71
PUT4	YOR348C	GCN2	P15442	1659 aa		19.46	■□□□□ 0.71
PUT4	YOR348C	BUD3	P25558	1636 aa		19.45	■□□□□ 0.7
PUT4	YOR348C	BUD21	Q08492	214 aa	Predicted RBP	19.41	■□□□□ 0.7
PUT4	YOR348C	YSP2	Q06681	1438 aa		19.38	■□□□□ 0.69
PUT4	YOR348C	MET5	P47169	1442 aa		19.36	■□□□□ 0.69
PUT4	YOR348C	MMS1	Q06211	1407 aa		19.34	■□□□□ 0.69
PUT4	YOR348C	NOP7	P53261	605 aa	Known RBP	19.29	■□□□□ 0.68
PUT4	YOR348C	IQG1	Q12280	1495 aa		19.27	■□□□□ 0.68
PUT4	YOR348C	ENP1	P38333	483 aa	Known RBP	19.24	■□□□□ 0.67
PUT4	YOR348C	SPT7	P35177	1332 aa		19.22	■□□□□ 0.67
PUT4	YOR348C	SEC3	P33332	1336 aa	Known RBP	19.2	■□□□□ 0.66
PUT4	YOR348C	NOP2	P40991	618 aa	Known RBP	19.18	■□□□□ 0.66
PUT4	YOR348C	PDR5	P33302	1511 aa	Known RBP	19.16	■□□□□ 0.66
PUT4	YOR348C	BNR1	P40450	1375 aa		19.14	■□□□□ 0.65
PUT4	YOR348C	PAF1	P38351	445 aa		19.12	■□□□□ 0.65
PUT4	YOR348C	YOR093C	Q12275	1648 aa		19.11	■□□□□ 0.65
PUT4	YOR348C	BFR2	Q06631	534 aa	Known RBP	19.07	■□□□□ 0.64
PUT4	YOR348C	LTE1	P07866	1435 aa		19.06	■□□□□ 0.64
PUT4	YOR348C	SEC7	P11075	2009 aa	Known RBP	19.05	■□□□□ 0.64
PUT4	YOR348C	ORC1	P54784	914 aa	Predicted RBP	19.02	■□□□□ 0.64
PUT4	YOR348C	CHC1	P22137	1653 aa	Known RBP	19.01	■□□□□ 0.63
PUT4	YOR348C	MHP1	P43638	1398 aa		18.97	■□□□□ 0.63
PUT4	YOR348C	RAV1	P47104	1357 aa		18.92	■□□□□ 0.62
PUT4	YOR348C	PDR11	P40550	1411 aa		18.92	■□□□□ 0.62
PUT4	YOR348C	LEU3	P08638	886 aa		18.9	■□□□□ 0.62
PUT4	YOR348C	PSD2	P53037	1138 aa	Known RBP	18.88	■□□□□ 0.61
PUT4	YOR348C	TY3B-I	Q7LHG5	1498 aa	Known RBP	18.87	■□□□□ 0.61
PUT4	YOR348C	RTC1	Q08281	1341 aa		18.87	■□□□□ 0.61
PUT4	YOR348C	VMR1	P38735	1592 aa		18.87	■□□□□ 0.61
PUT4	YOR348C	DOP1	Q03921	1698 aa		18.82	■□□□□ 0.6
PUT4	YOR348C	TAF5	P38129	798 aa		18.82	■□□□□ 0.6
PUT4	YOR348C	TRM3	Q07527	1436 aa		18.81	■□□□□ 0.6
PUT4	YOR348C	IML1	P47170	1584 aa		18.78	■□□□□ 0.6
PUT4	YOR348C	NUP188	P52593	1655 aa	Known RBP	18.77	■□□□□ 0.6
PUT4	YOR348C	DRS2	P39524	1355 aa		18.77	■□□□□ 0.6
PUT4	YOR348C	PRS1	P32895	427 aa	Known RBP	18.77	■□□□□ 0.6
PUT4	YOR348C	YLR419W	Q06698	1435 aa	Known RBP	18.72	■□□□□ 0.59
PUT4	YOR348C	KIP3	P53086	805 aa	Known RBP	18.71	■□□□□ 0.59
PUT4	YOR348C	PDS5	Q04264	1277 aa		18.71	■□□□□ 0.59
PUT4	YOR348C	ESL2	P36168	1195 aa		18.69	■□□□□ 0.58
PUT4	YOR348C	NUP192	P47054	1683 aa		18.66	■□□□□ 0.58
PUT4	YOR348C	DNF2	Q12675	1612 aa		18.61	■□□□□ 0.57
PUT4	YOR348C	NST1	P53935	1240 aa		18.58	■□□□□ 0.56
PUT4	YOR348C	TYS1	P36421	394 aa	Known RBP	18.54	■□□□□ 0.56
PUT4	YOR348C	SPE2	P21182	396 aa		18.51	■□□□□ 0.55
PUT4	YOR348C	IPL1	P38991	367 aa		18.5	■□□□□ 0.55
PUT4	YOR348C	ITT1	Q04638	464 aa		18.5	■□□□□ 0.55
PUT4	YOR348C	SCT1	P32784	759 aa		18.44	■□□□□ 0.54
PUT4	YOR348C	YAP3	P38749	330 aa		18.43	■□□□□ 0.54
PUT4	YOR348C	BNI1	P41832	1953 aa		18.42	■□□□□ 0.54
PUT4	YOR348C	URN1	Q06525	465 aa	Known RBP	18.42	■□□□□ 0.54
PUT4	YOR348C	TAF8	Q03750	510 aa		18.41	■□□□□ 0.54
PUT4	YOR348C	RAD9	P14737	1309 aa		18.4	■□□□□ 0.54
PUT4	YOR348C	RTG3	P38165	486 aa		18.37	■□□□□ 0.53
PUT4	YOR348C	ALD4	P46367	519 aa	Known RBP	18.37	■□□□□ 0.53
PUT4	YOR348C	BCK1	Q01389	1478 aa		18.36	■□□□□ 0.53
PUT4	YOR348C	CHZ1	P40019	153 aa	Predicted RBP	18.32	■□□□□ 0.52
PUT4	YOR348C	CAB1	Q04430	367 aa		18.29	■□□□□ 0.52
PUT4	YOR348C	MLP1	Q02455	1875 aa	Known RBP	18.27	■□□□□ 0.52
PUT4	YOR348C	FKH1	P40466	484 aa		18.26	■□□□□ 0.51
PUT4	YOR348C	CFT1	Q06632	1357 aa	Known RBP	18.25	■□□□□ 0.51
PUT4	YOR348C	FUN12	P39730	1002 aa	Known RBP	18.22	■□□□□ 0.51
PUT4	YOR348C	NAP1	P25293	417 aa	Known RBP	18.2	■□□□□ 0.5
PUT4	YOR348C	RPP0	P05317	312 aa	Known RBP	18.19	■□□□□ 0.5
PUT4	YOR348C	CDC45	Q08032	650 aa		18.18	■□□□□ 0.5
PUT4	YOR348C	TRK1	P12685	1235 aa		18.18	■□□□□ 0.5
PUT4	YOR348C	VPS27	P40343	622 aa	Known RBP	18.18	■□□□□ 0.5
PUT4	YOR348C	YEF3	P16521	1044 aa	Known RBP	18.17	■□□□□ 0.5

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms