RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W PTC4P38089 393 aa8.79□□□□□ -1
HSH49YOR319W YEL023CP39992 682 aa8.79□□□□□ -1
HSH49YOR319W GRE2Q12068 342 aaKnown RBP8.74□□□□□ -1.01
HSH49YOR319W CHL1P22516 861 aaPredicted RBP8.72□□□□□ -1.01
HSH49YOR319W MIF2P35201 549 aa8.72□□□□□ -1.01
HSH49YOR319W MAK11P20484 414 aaKnown RBP8.7□□□□□ -1.02
HSH49YOR319W PRE3P38624 215 aa8.69□□□□□ -1.02
HSH49YOR319W BCK2P33306 851 aa8.68□□□□□ -1.02
HSH49YOR319W RAM2P29703 316 aa8.67□□□□□ -1.02
HSH49YOR319W ATH1P48016 1211 aa8.67□□□□□ -1.02
HSH49YOR319W PTC3P34221 468 aaKnown RBP8.65□□□□□ -1.02
HSH49YOR319W GUT1P32190 709 aa8.64□□□□□ -1.03
HSH49YOR319W EDS1P38073 919 aa8.63□□□□□ -1.03
HSH49YOR319W PML39Q03760 334 aa8.63□□□□□ -1.03
HSH49YOR319W COQ8P27697 501 aa8.58□□□□□ -1.04
HSH49YOR319W ELP4Q02884 456 aaKnown RBP8.56□□□□□ -1.04
HSH49YOR319W YDR344CQ05510 147 aa8.54□□□□□ -1.04
HSH49YOR319W VRP1P37370 817 aa8.51□□□□□ -1.05
HSH49YOR319W NST1P53935 1240 aa8.51□□□□□ -1.05
HSH49YOR319W MID1P41821 548 aa8.49□□□□□ -1.05
HSH49YOR319W SOL3P38858 249 aa8.48□□□□□ -1.05
HSH49YOR319W ARH1P48360 493 aa8.48□□□□□ -1.05
HSH49YOR319W XDJ1P39102 459 aa8.47□□□□□ -1.05
HSH49YOR319W PEX29Q03370 554 aa8.47□□□□□ -1.05
HSH49YOR319W AI4P03878 556 aa8.46□□□□□ -1.06
HSH49YOR319W MPH3P0CE00 602 aa8.46□□□□□ -1.06
HSH49YOR319W NOP53Q12080 455 aaKnown RBP8.43□□□□□ -1.06
HSH49YOR319W SPT23P35210 1082 aa8.4□□□□□ -1.06
HSH49YOR319W ILV3P39522 585 aaKnown RBP8.39□□□□□ -1.07
HSH49YOR319W YGR273CP53329 174 aa8.38□□□□□ -1.07
HSH49YOR319W HAP5Q02516 242 aa8.37□□□□□ -1.07
HSH49YOR319W DPS1P04802 557 aaKnown RBP8.32□□□□□ -1.08
HSH49YOR319W BNI4P53858 892 aa8.31□□□□□ -1.08
HSH49YOR319W MPC54Q08550 464 aa8.31□□□□□ -1.08
HSH49YOR319W PTC2P39966 464 aaKnown RBP8.29□□□□□ -1.08
HSH49YOR319W SLI15P38283 698 aa8.27□□□□□ -1.09
HSH49YOR319W YML082WQ04533 649 aaKnown RBP8.26□□□□□ -1.09
HSH49YOR319W RQC2Q12532 1038 aaKnown RBP8.26□□□□□ -1.09
HSH49YOR319W NMA111P53920 997 aa8.25□□□□□ -1.09
HSH49YOR319W DPL1Q05567 589 aa8.23□□□□□ -1.09
HSH49YOR319W KEX1P09620 729 aa8.2□□□□□ -1.1
HSH49YOR319W SET1P38827 1080 aaKnown RBP8.19□□□□□ -1.1
HSH49YOR319W RGA2Q06407 1009 aa8.18□□□□□ -1.1
HSH49YOR319W ISU2Q12056 156 aa8.15□□□□□ -1.1
HSH49YOR319W VHR2P40041 505 aa8.11□□□□□ -1.11
HSH49YOR319W YLR326WQ06170 240 aaKnown RBP8.11□□□□□ -1.11
HSH49YOR319W CDC73Q06697 393 aa8.11□□□□□ -1.11
HSH49YOR319W UBP14P38237 781 aaKnown RBP8.09□□□□□ -1.11
HSH49YOR319W YPR015CQ12531 247 aa8.09□□□□□ -1.11
HSH49YOR319W RAM1P22007 431 aa8.07□□□□□ -1.12
HSH49YOR319W SRC1Q03707 834 aa8.07□□□□□ -1.12
HSH49YOR319W RAD54P32863 898 aa8.06□□□□□ -1.12
HSH49YOR319W PCS60P38137 543 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
HSH49YOR319W GYP1Q08484 637 aa8.05□□□□□ -1.12
HSH49YOR319W RPP1BP10622 106 aaKnown RBP8.04□□□□□ -1.12
HSH49YOR319W RAS1P01119 309 aa8.01□□□□□ -1.13
HSH49YOR319W PDR1P12383 1068 aa8.01□□□□□ -1.13
HSH49YOR319W IFH1P39520 1085 aa7.98□□□□□ -1.13
HSH49YOR319W KIC1P38692 1080 aa7.97□□□□□ -1.13
HSH49YOR319W SAS4Q04003 481 aa7.96□□□□□ -1.14
HSH49YOR319W AMS1P22855 1083 aa7.95□□□□□ -1.14
HSH49YOR319W YDR090CQ03193 310 aa7.93□□□□□ -1.14
HSH49YOR319W DMA1P38823 416 aa7.92□□□□□ -1.14
HSH49YOR319W PEX21P50091 288 aa7.92□□□□□ -1.14
HSH49YOR319W RGA1P39083 1007 aa7.91□□□□□ -1.14
HSH49YOR319W YRR1Q12172 810 aa7.89□□□□□ -1.15
HSH49YOR319W SDH2P21801 266 aa7.88□□□□□ -1.15
HSH49YOR319W REF2P42073 533 aaPredicted RBP7.88□□□□□ -1.15
HSH49YOR319W YEL077CQ3E7X8 1277 aa7.88□□□□□ -1.15
HSH49YOR319W TRK1P12685 1235 aa7.86□□□□□ -1.15
HSH49YOR319W MRF1P30775 413 aaPredicted RBP7.86□□□□□ -1.15
HSH49YOR319W YPR148CQ06523 435 aa7.86□□□□□ -1.15
HSH49YOR319W CSC1Q06538 782 aa7.86□□□□□ -1.15
HSH49YOR319W TFB4Q12004 338 aa7.85□□□□□ -1.15
HSH49YOR319W GAP1P19145 602 aaPredicted RBP7.84□□□□□ -1.15
HSH49YOR319W BUD20Q08004 166 aaPredicted RBP7.84□□□□□ -1.15
HSH49YOR319W PRT1P06103 763 aaKnown RBP7.83□□□□□ -1.16
HSH49YOR319W TUM1Q08686 304 aaKnown RBP7.83□□□□□ -1.16
HSH49YOR319W VPS70P47161 811 aa7.81□□□□□ -1.16
HSH49YOR319W STR2P47164 639 aa7.81□□□□□ -1.16
HSH49YOR319W NUD1P32336 851 aa7.8□□□□□ -1.16
HSH49YOR319W ISM1P48526 1002 aa7.8□□□□□ -1.16
HSH49YOR319W NPL4P33755 580 aa7.78□□□□□ -1.16
HSH49YOR319W ORC6P38826 435 aa7.77□□□□□ -1.17
HSH49YOR319W ERG12P07277 443 aa7.76□□□□□ -1.17
HSH49YOR319W MAK21Q12176 1025 aaKnown RBP7.76□□□□□ -1.17
HSH49YOR319W COX6P00427 148 aa7.75□□□□□ -1.17
HSH49YOR319W GCD11P32481 527 aaKnown RBP7.72□□□□□ -1.17
HSH49YOR319W MVP1P40959 511 aaKnown RBP7.71□□□□□ -1.18
HSH49YOR319W SPT16P32558 1035 aaKnown RBP7.7□□□□□ -1.18
HSH49YOR319W CKB1P43639 278 aa7.7□□□□□ -1.18
HSH49YOR319W SAS10Q12136 610 aaPredicted RBP7.69□□□□□ -1.18
HSH49YOR319W TY1A-DR4O74302 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-HP0C2I4 478 aaKnown RBP7.68□□□□□ -1.18
HSH49YOR319W TY1A-AP0CX57 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-PR1P0CX58 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-ORP0CX59 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-PR2P0CX60 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-DR5P0CX65 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-ER2P0CX66 440 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms