RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W ATH1P48016 1211 aa5.86□□□□□ -1.47
SRL1YOR247W TRP5P00931 707 aaKnown RBP5.85□□□□□ -1.47
SRL1YOR247W GUT1P32190 709 aa5.85□□□□□ -1.47
SRL1YOR247W CKB1P43639 278 aa5.85□□□□□ -1.47
SRL1YOR247W IOC2Q12072 812 aa5.85□□□□□ -1.47
SRL1YOR247W SPB4P25808 606 aaPredicted RBP5.84□□□□□ -1.47
SRL1YOR247W LDB19Q12502 818 aa5.84□□□□□ -1.47
SRL1YOR247W DCW1P36091 449 aa5.83□□□□□ -1.48
SRL1YOR247W JIP4Q03361 876 aa5.82□□□□□ -1.48
SRL1YOR247W YNL035CP53962 389 aaKnown RBP5.81□□□□□ -1.48
SRL1YOR247W VPS70P47161 811 aa5.8□□□□□ -1.48
SRL1YOR247W YEL023CP39992 682 aa5.79□□□□□ -1.48
SRL1YOR247W YPR148CQ06523 435 aa5.79□□□□□ -1.48
SRL1YOR247W RTG1P32607 177 aa5.78□□□□□ -1.48
SRL1YOR247W SEC61P32915 480 aa5.78□□□□□ -1.48
SRL1YOR247W PTC4P38089 393 aa5.78□□□□□ -1.48
SRL1YOR247W FKH1P40466 484 aa5.78□□□□□ -1.48
SRL1YOR247W TFG1P41895 735 aaPredicted RBP5.78□□□□□ -1.48
SRL1YOR247W YJL171CP46992 396 aa5.77□□□□□ -1.49
SRL1YOR247W NCR1Q12200 1170 aa5.75□□□□□ -1.49
SRL1YOR247W AIR2Q12476 344 aaKnown RBP5.75□□□□□ -1.49
SRL1YOR247W DAN4P47179 1161 aa5.73□□□□□ -1.49
SRL1YOR247W AI4P03878 556 aa5.71□□□□□ -1.5
SRL1YOR247W YGR273CP53329 174 aa5.71□□□□□ -1.5
SRL1YOR247W BMT6Q12291 365 aa5.7□□□□□ -1.5
SRL1YOR247W PBS2P08018 668 aa5.69□□□□□ -1.5
SRL1YOR247W MPH3P0CE00 602 aa5.69□□□□□ -1.5
SRL1YOR247W DMA2P53924 522 aa5.69□□□□□ -1.5
SRL1YOR247W YDL129WQ07555 291 aa5.69□□□□□ -1.5
SRL1YOR247W DSF2P38213 736 aa5.68□□□□□ -1.5
SRL1YOR247W SOL3P38858 249 aa5.68□□□□□ -1.5
SRL1YOR247W NST1P53935 1240 aa5.68□□□□□ -1.5
SRL1YOR247W REF2P42073 533 aaPredicted RBP5.65□□□□□ -1.5
SRL1YOR247W SAP30P38429 201 aa5.64□□□□□ -1.51
SRL1YOR247W PML39Q03760 334 aa5.64□□□□□ -1.51
SRL1YOR247W KEX1P09620 729 aa5.63□□□□□ -1.51
SRL1YOR247W YNR021WP53723 404 aaKnown RBP5.63□□□□□ -1.51
SRL1YOR247W VHR2P40041 505 aa5.62□□□□□ -1.51
SRL1YOR247W HGH1P48362 394 aaKnown RBP5.62□□□□□ -1.51
SRL1YOR247W MAK21Q12176 1025 aaKnown RBP5.62□□□□□ -1.51
SRL1YOR247W MAM3Q12296 706 aa5.62□□□□□ -1.51
SRL1YOR247W UBP14P38237 781 aaKnown RBP5.61□□□□□ -1.51
SRL1YOR247W KIC1P38692 1080 aa5.61□□□□□ -1.51
SRL1YOR247W PEX29Q03370 554 aa5.61□□□□□ -1.51
SRL1YOR247W YLR326WQ06170 240 aaKnown RBP5.61□□□□□ -1.51
SRL1YOR247W RPP1BP10622 106 aaKnown RBP5.6□□□□□ -1.51
SRL1YOR247W RAD54P32863 898 aa5.6□□□□□ -1.51
SRL1YOR247W KIN1P13185 1064 aa5.59□□□□□ -1.51
SRL1YOR247W ILV3P39522 585 aaKnown RBP5.59□□□□□ -1.51
SRL1YOR247W RLF2Q12495 606 aa5.58□□□□□ -1.52
SRL1YOR247W SLI15P38283 698 aa5.57□□□□□ -1.52
SRL1YOR247W MID1P41821 548 aa5.57□□□□□ -1.52
SRL1YOR247W AIM7Q12156 149 aa5.57□□□□□ -1.52
SRL1YOR247W CHL1P22516 861 aaPredicted RBP5.56□□□□□ -1.52
SRL1YOR247W IES2P40154 320 aa5.56□□□□□ -1.52
SRL1YOR247W COX6P00427 148 aa5.55□□□□□ -1.52
SRL1YOR247W PCS60P38137 543 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
SRL1YOR247W PRE3P38624 215 aa5.55□□□□□ -1.52
SRL1YOR247W ELP4Q02884 456 aaKnown RBP5.55□□□□□ -1.52
SRL1YOR247W GLC3P32775 704 aa5.54□□□□□ -1.52
SRL1YOR247W ARH1P48360 493 aa5.54□□□□□ -1.52
SRL1YOR247W YDR090CQ03193 310 aa5.54□□□□□ -1.52
SRL1YOR247W DPL1Q05567 589 aa5.54□□□□□ -1.52
SRL1YOR247W ATF2P53296 535 aa5.53□□□□□ -1.52
SRL1YOR247W MPC54Q08550 464 aa5.53□□□□□ -1.52
SRL1YOR247W NUP42P49686 430 aaKnown RBP5.52□□□□□ -1.53
SRL1YOR247W HAP5Q02516 242 aa5.52□□□□□ -1.53
SRL1YOR247W DIT2P21595 489 aa5.51□□□□□ -1.53
SRL1YOR247W NMA111P53920 997 aa5.5□□□□□ -1.53
SRL1YOR247W SPT23P35210 1082 aa5.49□□□□□ -1.53
SRL1YOR247W ISU2Q12056 156 aa5.49□□□□□ -1.53
SRL1YOR247W BNI4P53858 892 aa5.48□□□□□ -1.53
SRL1YOR247W CSC1Q06538 782 aa5.48□□□□□ -1.53
SRL1YOR247W CDC73Q06697 393 aa5.48□□□□□ -1.53
SRL1YOR247W PEX21P50091 288 aa5.47□□□□□ -1.53
SRL1YOR247W PTC2P39966 464 aaKnown RBP5.46□□□□□ -1.54
SRL1YOR247W TFB4Q12004 338 aa5.46□□□□□ -1.54
SRL1YOR247W BCK2P33306 851 aa5.44□□□□□ -1.54
SRL1YOR247W GUA1P38625 525 aaKnown RBP5.44□□□□□ -1.54
SRL1YOR247W ORC6P38826 435 aa5.44□□□□□ -1.54
SRL1YOR247W HPC2Q01448 625 aa5.43□□□□□ -1.54
SRL1YOR247W YDR344CQ05510 147 aa5.43□□□□□ -1.54
SRL1YOR247W GAP1P19145 602 aaPredicted RBP5.42□□□□□ -1.54
SRL1YOR247W PSE1P32337 1089 aaKnown RBP5.42□□□□□ -1.54
SRL1YOR247W YML082WQ04533 649 aaKnown RBP5.42□□□□□ -1.54
SRL1YOR247W VRP1P37370 817 aa5.4□□□□□ -1.54
SRL1YOR247W BRL1P38770 471 aa5.4□□□□□ -1.54
SRL1YOR247W SSA2P10592 639 aaKnown RBP5.39□□□□□ -1.55
SRL1YOR247W CLB5P30283 435 aa5.39□□□□□ -1.55
SRL1YOR247W MVP1P40959 511 aaKnown RBP5.39□□□□□ -1.55
SRL1YOR247W TUM1Q08686 304 aaKnown RBP5.39□□□□□ -1.55
SRL1YOR247W YRR1Q12172 810 aa5.39□□□□□ -1.55
SRL1YOR247W RGR1P19263 1082 aa5.38□□□□□ -1.55
SRL1YOR247W NPL4P33755 580 aa5.36□□□□□ -1.55
SRL1YOR247W XDJ1P39102 459 aa5.36□□□□□ -1.55
SRL1YOR247W CSN12P47130 423 aa5.36□□□□□ -1.55
SRL1YOR247W TFB3Q03290 321 aa5.36□□□□□ -1.55
SRL1YOR247W YPR109WQ06104 294 aa5.36□□□□□ -1.55
SRL1YOR247W TEA1P47988 759 aa5.35□□□□□ -1.55
SRL1YOR247W PDR1P12383 1068 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms