RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeastyeast

Gene SME1, Length 285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SME1YOR159C NCR1Q12200 1170 aa9.25□□□□□ -0.93
SME1YOR159C YEL023CP39992 682 aa9.23□□□□□ -0.93
SME1YOR159C DAN4P47179 1161 aa9.23□□□□□ -0.93
SME1YOR159C SEC61P32915 480 aa9.22□□□□□ -0.93
SME1YOR159C BMT6Q12291 365 aa9.21□□□□□ -0.94
SME1YOR159C GUT1P32190 709 aa9.2□□□□□ -0.94
SME1YOR159C JIP4Q03361 876 aa9.2□□□□□ -0.94
SME1YOR159C PTC4P38089 393 aa9.16□□□□□ -0.94
SME1YOR159C SOL3P38858 249 aa9.16□□□□□ -0.94
SME1YOR159C NST1P53935 1240 aa9.14□□□□□ -0.95
SME1YOR159C SET1P38827 1080 aaKnown RBP9.12□□□□□ -0.95
SME1YOR159C TFG1P41895 735 aaPredicted RBP9.12□□□□□ -0.95
SME1YOR159C SAP30P38429 201 aa9.11□□□□□ -0.95
SME1YOR159C YDL129WQ07555 291 aa9.09□□□□□ -0.95
SME1YOR159C NOP53Q12080 455 aaKnown RBP9.08□□□□□ -0.96
SME1YOR159C ILV3P39522 585 aaKnown RBP9.06□□□□□ -0.96
SME1YOR159C PML39Q03760 334 aa9.06□□□□□ -0.96
SME1YOR159C YGR273CP53329 174 aa9.03□□□□□ -0.96
SME1YOR159C YDR344CQ05510 147 aa9.03□□□□□ -0.96
SME1YOR159C MPH3P0CE00 602 aa9.01□□□□□ -0.97
SME1YOR159C MID1P41821 548 aa9.01□□□□□ -0.97
SME1YOR159C AI4P03878 556 aa8.99□□□□□ -0.97
SME1YOR159C PRE3P38624 215 aa8.9□□□□□ -0.98
SME1YOR159C KEX1P09620 729 aa8.89□□□□□ -0.99
SME1YOR159C VHR2P40041 505 aa8.89□□□□□ -0.99
SME1YOR159C CHL1P22516 861 aaPredicted RBP8.88□□□□□ -0.99
SME1YOR159C SLI15P38283 698 aa8.88□□□□□ -0.99
SME1YOR159C PEX29Q03370 554 aa8.87□□□□□ -0.99
SME1YOR159C YLR326WQ06170 240 aaKnown RBP8.87□□□□□ -0.99
SME1YOR159C UBP14P38237 781 aaKnown RBP8.86□□□□□ -0.99
SME1YOR159C DMA1P38823 416 aa8.86□□□□□ -0.99
SME1YOR159C ELP4Q02884 456 aaKnown RBP8.86□□□□□ -0.99
SME1YOR159C YPR148CQ06523 435 aa8.84□□□□□ -0.99
SME1YOR159C MPC54Q08550 464 aa8.83□□□□□ -1
SME1YOR159C ARH1P48360 493 aa8.82□□□□□ -1
SME1YOR159C IFH1P39520 1085 aa8.81□□□□□ -1
SME1YOR159C VPS70P47161 811 aa8.81□□□□□ -1
SME1YOR159C PCS60P38137 543 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
SME1YOR159C BCK2P33306 851 aa8.77□□□□□ -1.01
SME1YOR159C HAP5Q02516 242 aa8.76□□□□□ -1.01
SME1YOR159C YDR090CQ03193 310 aa8.76□□□□□ -1.01
SME1YOR159C CDC73Q06697 393 aa8.76□□□□□ -1.01
SME1YOR159C RAD54P32863 898 aa8.75□□□□□ -1.01
SME1YOR159C NMA111P53920 997 aa8.74□□□□□ -1.01
SME1YOR159C DPL1Q05567 589 aa8.74□□□□□ -1.01
SME1YOR159C REF2P42073 533 aaPredicted RBP8.73□□□□□ -1.01
SME1YOR159C SPT23P35210 1082 aa8.71□□□□□ -1.02
SME1YOR159C VRP1P37370 817 aa8.71□□□□□ -1.02
SME1YOR159C BNI4P53858 892 aa8.68□□□□□ -1.02
SME1YOR159C KIC1P38692 1080 aa8.65□□□□□ -1.02
SME1YOR159C PTC2P39966 464 aaKnown RBP8.64□□□□□ -1.03
SME1YOR159C ISU2Q12056 156 aa8.64□□□□□ -1.03
SME1YOR159C YPR015CQ12531 247 aa8.61□□□□□ -1.03
SME1YOR159C PDR1P12383 1068 aa8.6□□□□□ -1.03
SME1YOR159C RAM1P22007 431 aa8.59□□□□□ -1.03
SME1YOR159C YML082WQ04533 649 aaKnown RBP8.59□□□□□ -1.03
SME1YOR159C SAS10Q12136 610 aaPredicted RBP8.59□□□□□ -1.03
SME1YOR159C COX6P00427 148 aa8.58□□□□□ -1.04
SME1YOR159C XDJ1P39102 459 aa8.58□□□□□ -1.04
SME1YOR159C PBS2P08018 668 aa8.56□□□□□ -1.04
SME1YOR159C ORC6P38826 435 aa8.55□□□□□ -1.04
SME1YOR159C RPP1BP10622 106 aaKnown RBP8.54□□□□□ -1.04
SME1YOR159C GAP1P19145 602 aaPredicted RBP8.54□□□□□ -1.04
SME1YOR159C CKB1P43639 278 aa8.54□□□□□ -1.04
SME1YOR159C MAK21Q12176 1025 aaKnown RBP8.54□□□□□ -1.04
SME1YOR159C YRR1Q12172 810 aa8.52□□□□□ -1.05
SME1YOR159C PEX21P50091 288 aa8.5□□□□□ -1.05
SME1YOR159C CSC1Q06538 782 aa8.48□□□□□ -1.05
SME1YOR159C TUM1Q08686 304 aaKnown RBP8.48□□□□□ -1.05
SME1YOR159C TFB4Q12004 338 aa8.46□□□□□ -1.06
SME1YOR159C MVP1P40959 511 aaKnown RBP8.45□□□□□ -1.06
SME1YOR159C RQC2Q12532 1038 aaKnown RBP8.45□□□□□ -1.06
SME1YOR159C MAM3Q12296 706 aa8.43□□□□□ -1.06
SME1YOR159C DPS1P04802 557 aaKnown RBP8.42□□□□□ -1.06
SME1YOR159C RGR1P19263 1082 aa8.42□□□□□ -1.06
SME1YOR159C DSF2P38213 736 aa8.42□□□□□ -1.06
SME1YOR159C IES2P40154 320 aa8.42□□□□□ -1.06
SME1YOR159C STR2P47164 639 aa8.42□□□□□ -1.06
SME1YOR159C ISM1P48526 1002 aa8.41□□□□□ -1.06
SME1YOR159C YPR109WQ06104 294 aa8.41□□□□□ -1.06
SME1YOR159C NUD1P32336 851 aa8.4□□□□□ -1.06
SME1YOR159C BUD20Q08004 166 aaPredicted RBP8.4□□□□□ -1.06
SME1YOR159C GYP1Q08484 637 aa8.4□□□□□ -1.06
SME1YOR159C SPB4P25808 606 aaPredicted RBP8.39□□□□□ -1.07
SME1YOR159C SDH2P21801 266 aa8.35□□□□□ -1.07
SME1YOR159C NUP42P49686 430 aaKnown RBP8.35□□□□□ -1.07
SME1YOR159C PSE1P32337 1089 aaKnown RBP8.33□□□□□ -1.08
SME1YOR159C TY1A-DR4O74302 440 aa8.32□□□□□ -1.08
SME1YOR159C RAS1P01119 309 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-HP0C2I4 478 aaKnown RBP8.32□□□□□ -1.08
SME1YOR159C TY1A-AP0CX57 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-PR1P0CX58 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-ORP0CX59 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-PR2P0CX60 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-DR5P0CX65 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-ER2P0CX66 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-GR3P0CX67 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-LR1P0CX68 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-MR2P0CX69 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-JR2P47099 440 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms