RNA–Protein interactions for RNA: YOR148C

SPP2, Transcript of Essential protein that promotes the first step of splicing, yeastyeast

Gene SPP2, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPP2YOR148C TY1B-LR1Q12088 1755 aaKnown RBP13.31□□□□□ -0.28
SPP2YOR148C TY1B-NL1Q12112 1755 aa13.31□□□□□ -0.28
SPP2YOR148C TY1B-GR1Q12141 1755 aa13.31□□□□□ -0.28
SPP2YOR148C TY1B-BLQ12490 1755 aa13.31□□□□□ -0.28
SPP2YOR148C ESC1Q03661 1658 aaKnown RBP13.29□□□□□ -0.28
SPP2YOR148C IFH1P39520 1085 aa13.25□□□□□ -0.29
SPP2YOR148C TY3B-GQ99315 1547 aa13.23□□□□□ -0.29
SPP2YOR148C RPA190P10964 1664 aaKnown RBP13.23□□□□□ -0.29
SPP2YOR148C DNF1P32660 1571 aa13.23□□□□□ -0.29
SPP2YOR148C NTE1Q04958 1679 aa13.21□□□□□ -0.3
SPP2YOR148C SSM4P40318 1319 aa13.19□□□□□ -0.3
SPP2YOR148C IRC20Q06554 1556 aa13.18□□□□□ -0.3
SPP2YOR148C GEA2P39993 1459 aaKnown RBP13.17□□□□□ -0.3
SPP2YOR148C RPO21P04050 1733 aaKnown RBP13.17□□□□□ -0.3
SPP2YOR148C YBT1P32386 1661 aa13.12□□□□□ -0.31
SPP2YOR148C CAT8P39113 1433 aa13.1□□□□□ -0.31
SPP2YOR148C VPS15P22219 1454 aa13.07□□□□□ -0.32
SPP2YOR148C NUP159P40477 1460 aa13.07□□□□□ -0.32
SPP2YOR148C RTT106P40161 455 aa13.05□□□□□ -0.32
SPP2YOR148C PDR12Q02785 1511 aa13□□□□□ -0.33
SPP2YOR148C MET5P47169 1442 aa12.96□□□□□ -0.34
SPP2YOR148C PDR10P51533 1564 aa12.95□□□□□ -0.34
SPP2YOR148C ARO1P08566 1588 aaKnown RBP12.94□□□□□ -0.34
SPP2YOR148C GDB1Q06625 1536 aa12.94□□□□□ -0.34
SPP2YOR148C SPO14P36126 1683 aa12.93□□□□□ -0.34
SPP2YOR148C YRF1-1P0CX20 1796 aa12.92□□□□□ -0.34
SPP2YOR148C YRF1-5P0CX21 1796 aa12.92□□□□□ -0.34
SPP2YOR148C YRF1-8P0CX22 1796 aa12.92□□□□□ -0.34
SPP2YOR148C SRB8P25648 1427 aa12.92□□□□□ -0.34
SPP2YOR148C MET10P39692 1035 aa12.89□□□□□ -0.35
SPP2YOR148C NUP157P40064 1391 aaKnown RBP12.87□□□□□ -0.35
SPP2YOR148C GCN2P15442 1659 aa12.78□□□□□ -0.36
SPP2YOR148C YSP2Q06681 1438 aa12.78□□□□□ -0.36
SPP2YOR148C CKB1P43639 278 aa12.77□□□□□ -0.37
SPP2YOR148C MMS1Q06211 1407 aa12.76□□□□□ -0.37
SPP2YOR148C IQG1Q12280 1495 aa12.76□□□□□ -0.37
SPP2YOR148C BUD3P25558 1636 aa12.74□□□□□ -0.37
SPP2YOR148C PRY3P47033 881 aa12.73□□□□□ -0.37
SPP2YOR148C BUD21Q08492 214 aaPredicted RBP12.67□□□□□ -0.38
SPP2YOR148C PDR5P33302 1511 aaKnown RBP12.62□□□□□ -0.39
SPP2YOR148C POL5P39985 1022 aaKnown RBP12.6□□□□□ -0.39
SPP2YOR148C LTE1P07866 1435 aa12.6□□□□□ -0.39
SPP2YOR148C YOR093CQ12275 1648 aa12.59□□□□□ -0.39
SPP2YOR148C BNR1P40450 1375 aa12.58□□□□□ -0.4
SPP2YOR148C SEC7P11075 2009 aaKnown RBP12.56□□□□□ -0.4
SPP2YOR148C CHC1P22137 1653 aaKnown RBP12.54□□□□□ -0.4
SPP2YOR148C TRM3Q07527 1436 aa12.54□□□□□ -0.4
SPP2YOR148C NOP7P53261 605 aaKnown RBP12.53□□□□□ -0.4
SPP2YOR148C DOP1Q03921 1698 aa12.52□□□□□ -0.4
SPP2YOR148C DRS2P39524 1355 aa12.45□□□□□ -0.42
SPP2YOR148C PAF1P38351 445 aa12.45□□□□□ -0.42
SPP2YOR148C VMR1P38735 1592 aa12.44□□□□□ -0.42
SPP2YOR148C NSR1P27476 414 aaKnown RBP RIP-Chip data12.43□□□□□ -0.42not detected
SPP2YOR148C BFR2Q06631 534 aaKnown RBP12.42□□□□□ -0.42
SPP2YOR148C RAV1P47104 1357 aa12.42□□□□□ -0.42
SPP2YOR148C NUP188P52593 1655 aaKnown RBP12.41□□□□□ -0.42
SPP2YOR148C SEC3P33332 1336 aaKnown RBP12.4□□□□□ -0.42
SPP2YOR148C PDR11P40550 1411 aa12.4□□□□□ -0.42
SPP2YOR148C IML1P47170 1584 aa12.37□□□□□ -0.43
SPP2YOR148C RTC1Q08281 1341 aa12.37□□□□□ -0.43
SPP2YOR148C TY3B-IQ7LHG5 1498 aaKnown RBP12.36□□□□□ -0.43
SPP2YOR148C DNF2Q12675 1612 aa12.33□□□□□ -0.43
SPP2YOR148C ENP1P38333 483 aaKnown RBP12.33□□□□□ -0.44
SPP2YOR148C BNI1P41832 1953 aa12.32□□□□□ -0.44
SPP2YOR148C MHP1P43638 1398 aa12.31□□□□□ -0.44
SPP2YOR148C SPT7P35177 1332 aa12.31□□□□□ -0.44
SPP2YOR148C ITT1Q04638 464 aa12.27□□□□□ -0.45
SPP2YOR148C NUP192P47054 1683 aa12.25□□□□□ -0.45
SPP2YOR148C YLR419WQ06698 1435 aaKnown RBP12.21□□□□□ -0.45
SPP2YOR148C ESL2P36168 1195 aa12.2□□□□□ -0.46
SPP2YOR148C TAF5P38129 798 aa12.19□□□□□ -0.46
SPP2YOR148C ORC1P54784 914 aaPredicted RBP12.18□□□□□ -0.46
SPP2YOR148C IPL1P38991 367 aa12.17□□□□□ -0.46
SPP2YOR148C AAD16Q02895 342 aa12.17□□□□□ -0.46
SPP2YOR148C URN1Q06525 465 aaKnown RBP12.17□□□□□ -0.46
SPP2YOR148C TYS1P36421 394 aaKnown RBP12.14□□□□□ -0.47
SPP2YOR148C HAP1P0CE41 1502 aa12.13□□□□□ -0.47
SPP2YOR148C PRI1P10363 409 aa12.13□□□□□ -0.47
SPP2YOR148C KIP3P53086 805 aaKnown RBP12.13□□□□□ -0.47
SPP2YOR148C PSD2P53037 1138 aaKnown RBP12.11□□□□□ -0.47
SPP2YOR148C PDS5Q04264 1277 aa12.09□□□□□ -0.47
SPP2YOR148C BCK1Q01389 1478 aa12.08□□□□□ -0.47
SPP2YOR148C SCT1P32784 759 aa12.08□□□□□ -0.48
SPP2YOR148C NOP2P40991 618 aaKnown RBP12.08□□□□□ -0.48
SPP2YOR148C YAP3P38749 330 aa12.07□□□□□ -0.48
SPP2YOR148C SPE2P21182 396 aa12.05□□□□□ -0.48
SPP2YOR148C LEU3P08638 886 aa12.03□□□□□ -0.48
SPP2YOR148C PRS1P32895 427 aaKnown RBP12.03□□□□□ -0.48
SPP2YOR148C ALD4P46367 519 aaKnown RBP12.03□□□□□ -0.48
SPP2YOR148C RAD9P14737 1309 aa12.02□□□□□ -0.49
SPP2YOR148C DNF3Q12674 1656 aa11.98□□□□□ -0.49
SPP2YOR148C TAF8Q03750 510 aa11.98□□□□□ -0.49
SPP2YOR148C NST1P53935 1240 aa11.96□□□□□ -0.49
SPP2YOR148C CAB1Q04430 367 aa11.94□□□□□ -0.5
SPP2YOR148C NAP1P25293 417 aaKnown RBP11.91□□□□□ -0.5
SPP2YOR148C FKH1P40466 484 aa11.9□□□□□ -0.5
SPP2YOR148C CHZ1P40019 153 aaPredicted RBP11.89□□□□□ -0.51
SPP2YOR148C MIF2P35201 549 aa11.88□□□□□ -0.51
SPP2YOR148C RTG3P38165 486 aa11.88□□□□□ -0.51
SPP2YOR148C YCK3P39962 524 aa11.88□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms