RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W HTA2P04912 132 aa7.23□□□□□ -1.25
VPS17YOR132W YPR148CQ06523 435 aa7.23□□□□□ -1.25
VPS17YOR132W AIR2Q12476 344 aaKnown RBP7.23□□□□□ -1.25
VPS17YOR132W FKH1P40466 484 aa7.22□□□□□ -1.25
VPS17YOR132W TRP5P00931 707 aaKnown RBP7.22□□□□□ -1.25
VPS17YOR132W VPS70P47161 811 aa7.19□□□□□ -1.26
VPS17YOR132W JIP4Q03361 876 aa7.16□□□□□ -1.26
VPS17YOR132W YEL023CP39992 682 aa7.15□□□□□ -1.27
VPS17YOR132W CKB1P43639 278 aa7.15□□□□□ -1.27
VPS17YOR132W RTG1P32607 177 aa7.13□□□□□ -1.27
VPS17YOR132W PTC4P38089 393 aa7.13□□□□□ -1.27
VPS17YOR132W SOL3P38858 249 aa7.13□□□□□ -1.27
VPS17YOR132W YJL171CP46992 396 aa7.13□□□□□ -1.27
VPS17YOR132W YGR273CP53329 174 aa7.13□□□□□ -1.27
VPS17YOR132W YNL035CP53962 389 aaKnown RBP7.13□□□□□ -1.27
VPS17YOR132W REF2P42073 533 aaPredicted RBP7.1□□□□□ -1.27
VPS17YOR132W SEC61P32915 480 aa7.09□□□□□ -1.27
VPS17YOR132W NST1P53935 1240 aa7.09□□□□□ -1.27
VPS17YOR132W DAN4P47179 1161 aa7.09□□□□□ -1.27
VPS17YOR132W NCR1Q12200 1170 aa7.09□□□□□ -1.27
VPS17YOR132W AI4P03878 556 aa7.07□□□□□ -1.28
VPS17YOR132W MPH3P0CE00 602 aa7.07□□□□□ -1.28
VPS17YOR132W UBP14P38237 781 aaKnown RBP7.06□□□□□ -1.28
VPS17YOR132W VHR2P40041 505 aa7.06□□□□□ -1.28
VPS17YOR132W BMT6Q12291 365 aa7.06□□□□□ -1.28
VPS17YOR132W TFG1P41895 735 aaPredicted RBP7.06□□□□□ -1.28
VPS17YOR132W YLR326WQ06170 240 aaKnown RBP7.04□□□□□ -1.28
VPS17YOR132W KEX1P09620 729 aa7.03□□□□□ -1.28
VPS17YOR132W PBS2P08018 668 aa7.03□□□□□ -1.28
VPS17YOR132W SPB4P25808 606 aaPredicted RBP7.03□□□□□ -1.28
VPS17YOR132W MAK21Q12176 1025 aaKnown RBP7.03□□□□□ -1.28
VPS17YOR132W ILV3P39522 585 aaKnown RBP7□□□□□ -1.29
VPS17YOR132W COX6P00427 148 aa7□□□□□ -1.29
VPS17YOR132W RAD54P32863 898 aa7□□□□□ -1.29
VPS17YOR132W KIC1P38692 1080 aa7□□□□□ -1.29
VPS17YOR132W YDR090CQ03193 310 aa7□□□□□ -1.29
VPS17YOR132W PML39Q03760 334 aa6.99□□□□□ -1.29
VPS17YOR132W YDL129WQ07555 291 aa6.99□□□□□ -1.29
VPS17YOR132W PCS60P38137 543 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
VPS17YOR132W DSF2P38213 736 aa6.97□□□□□ -1.29
VPS17YOR132W SLI15P38283 698 aa6.95□□□□□ -1.3
VPS17YOR132W SAP30P38429 201 aa6.95□□□□□ -1.3
VPS17YOR132W MID1P41821 548 aa6.94□□□□□ -1.3
VPS17YOR132W MAM3Q12296 706 aa6.94□□□□□ -1.3
VPS17YOR132W PEX29Q03370 554 aa6.91□□□□□ -1.3
VPS17YOR132W RPP1BP10622 106 aaKnown RBP6.9□□□□□ -1.3
VPS17YOR132W LEU3P08638 886 aa6.89□□□□□ -1.31
VPS17YOR132W IES2P40154 320 aa6.88□□□□□ -1.31
VPS17YOR132W DPL1Q05567 589 aa6.87□□□□□ -1.31
VPS17YOR132W MPC54Q08550 464 aa6.87□□□□□ -1.31
VPS17YOR132W CDC73Q06697 393 aa6.86□□□□□ -1.31
VPS17YOR132W NUP42P49686 430 aaKnown RBP6.84□□□□□ -1.31
VPS17YOR132W YDR344CQ05510 147 aa6.84□□□□□ -1.31
VPS17YOR132W ORC6P38826 435 aa6.84□□□□□ -1.32
VPS17YOR132W ARH1P48360 493 aa6.83□□□□□ -1.32
VPS17YOR132W PRE3P38624 215 aa6.82□□□□□ -1.32
VPS17YOR132W NMA111P53920 997 aa6.82□□□□□ -1.32
VPS17YOR132W ELP4Q02884 456 aaKnown RBP6.82□□□□□ -1.32
VPS17YOR132W CSC1Q06538 782 aa6.82□□□□□ -1.32
VPS17YOR132W ISU2Q12056 156 aa6.82□□□□□ -1.32
VPS17YOR132W CHL1P22516 861 aaPredicted RBP6.81□□□□□ -1.32
VPS17YOR132W HAP5Q02516 242 aa6.81□□□□□ -1.32
VPS17YOR132W DIT2P21595 489 aa6.81□□□□□ -1.32
VPS17YOR132W PSE1P32337 1089 aaKnown RBP6.81□□□□□ -1.32
VPS17YOR132W GAP1P19145 602 aaPredicted RBP6.8□□□□□ -1.32
VPS17YOR132W PEX21P50091 288 aa6.8□□□□□ -1.32
VPS17YOR132W YNR021WP53723 404 aaKnown RBP6.79□□□□□ -1.32
VPS17YOR132W TFB4Q12004 338 aa6.79□□□□□ -1.32
VPS17YOR132W MVP1P40959 511 aaKnown RBP6.77□□□□□ -1.32
VPS17YOR132W RGR1P19263 1082 aa6.77□□□□□ -1.33
VPS17YOR132W SPT23P35210 1082 aa6.76□□□□□ -1.33
VPS17YOR132W RPN1P38764 993 aaKnown RBP6.75□□□□□ -1.33
VPS17YOR132W BNI4P53858 892 aa6.75□□□□□ -1.33
VPS17YOR132W TUM1Q08686 304 aaKnown RBP6.74□□□□□ -1.33
VPS17YOR132W ATF2P53296 535 aa6.73□□□□□ -1.33
VPS17YOR132W YPR109WQ06104 294 aa6.73□□□□□ -1.33
VPS17YOR132W YRR1Q12172 810 aa6.73□□□□□ -1.33
VPS17YOR132W BCK2P33306 851 aa6.72□□□□□ -1.33
VPS17YOR132W CLB5P30283 435 aa6.71□□□□□ -1.33
VPS17YOR132W GLC3P32775 704 aa6.71□□□□□ -1.33
VPS17YOR132W PTC2P39966 464 aaKnown RBP6.71□□□□□ -1.33
VPS17YOR132W AIM7Q12156 149 aa6.71□□□□□ -1.34
VPS17YOR132W TEA1P47988 759 aa6.7□□□□□ -1.34
VPS17YOR132W LEO1P38439 464 aa6.69□□□□□ -1.34
VPS17YOR132W YML082WQ04533 649 aaKnown RBP6.68□□□□□ -1.34
VPS17YOR132W PDR1P12383 1068 aa6.67□□□□□ -1.34
VPS17YOR132W VRP1P37370 817 aa6.67□□□□□ -1.34
VPS17YOR132W RAM1P22007 431 aa6.65□□□□□ -1.35
VPS17YOR132W NUD1P32336 851 aa6.64□□□□□ -1.35
VPS17YOR132W KIN1P13185 1064 aa6.63□□□□□ -1.35
VPS17YOR132W NPL4P33755 580 aa6.63□□□□□ -1.35
VPS17YOR132W YPR015CQ12531 247 aa6.61□□□□□ -1.35
VPS17YOR132W NIS1P53939 407 aa6.6□□□□□ -1.35
VPS17YOR132W XDJ1P39102 459 aa6.59□□□□□ -1.35
VPS17YOR132W ISM1P48526 1002 aa6.59□□□□□ -1.35
VPS17YOR132W STR2P47164 639 aa6.58□□□□□ -1.36
VPS17YOR132W YMR196WQ04336 1088 aa6.58□□□□□ -1.36
VPS17YOR132W BUD20Q08004 166 aaPredicted RBP6.58□□□□□ -1.36
VPS17YOR132W SIT4P20604 311 aa6.57□□□□□ -1.36
VPS17YOR132W GCD11P32481 527 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 167.9 ms