RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W HTA1P04911 132 aaKnown RBP3.75□□□□□ -1.81
RRP6YOR001W HTA2P04912 132 aa3.75□□□□□ -1.81
RRP6YOR001W RTG1P32607 177 aa3.75□□□□□ -1.81
RRP6YOR001W DCW1P36091 449 aa3.74□□□□□ -1.81
RRP6YOR001W YNL035CP53962 389 aaKnown RBP3.74□□□□□ -1.81
RRP6YOR001W AIR2Q12476 344 aaKnown RBP3.74□□□□□ -1.81
RRP6YOR001W CKB1P43639 278 aa3.74□□□□□ -1.81
RRP6YOR001W VPS70P47161 811 aa3.74□□□□□ -1.81
RRP6YOR001W GRE2Q12068 342 aaKnown RBP3.74□□□□□ -1.81
RRP6YOR001W NCR1Q12200 1170 aa3.74□□□□□ -1.81
RRP6YOR001W BMT6Q12291 365 aa3.74□□□□□ -1.81
RRP6YOR001W DSF2P38213 736 aa3.73□□□□□ -1.81
RRP6YOR001W ATH1P48016 1211 aa3.73□□□□□ -1.81
RRP6YOR001W JIP4Q03361 876 aa3.72□□□□□ -1.81
RRP6YOR001W SEC61P32915 480 aa3.72□□□□□ -1.81
RRP6YOR001W SPB4P25808 606 aaPredicted RBP3.71□□□□□ -1.82
RRP6YOR001W COQ8P27697 501 aa3.71□□□□□ -1.82
RRP6YOR001W RLF2Q12495 606 aa3.7□□□□□ -1.82
RRP6YOR001W PTC3P34221 468 aaKnown RBP3.7□□□□□ -1.82
RRP6YOR001W IFH1P39520 1085 aa3.7□□□□□ -1.82
RRP6YOR001W GUT1P32190 709 aa3.69□□□□□ -1.82
RRP6YOR001W YEL023CP39992 682 aa3.69□□□□□ -1.82
RRP6YOR001W PTC4P38089 393 aa3.68□□□□□ -1.82
RRP6YOR001W PBS2P08018 668 aa3.67□□□□□ -1.82
RRP6YOR001W EDS1P38073 919 aa3.67□□□□□ -1.82
RRP6YOR001W KIN1P13185 1064 aa3.67□□□□□ -1.82
RRP6YOR001W YNR021WP53723 404 aaKnown RBP3.67□□□□□ -1.82
RRP6YOR001W NOP53Q12080 455 aaKnown RBP3.67□□□□□ -1.82
RRP6YOR001W SAP30P38429 201 aa3.66□□□□□ -1.82
RRP6YOR001W YDL129WQ07555 291 aa3.66□□□□□ -1.82
RRP6YOR001W NUP42P49686 430 aaKnown RBP3.65□□□□□ -1.83
RRP6YOR001W DAN4P47179 1161 aa3.64□□□□□ -1.83
RRP6YOR001W GLC3P32775 704 aa3.64□□□□□ -1.83
RRP6YOR001W AIM7Q12156 149 aa3.64□□□□□ -1.83
RRP6YOR001W RGA2Q06407 1009 aa3.63□□□□□ -1.83
RRP6YOR001W DIT2P21595 489 aa3.63□□□□□ -1.83
RRP6YOR001W IES2P40154 320 aa3.62□□□□□ -1.83
RRP6YOR001W PEX29Q03370 554 aa3.62□□□□□ -1.83
RRP6YOR001W PML39Q03760 334 aa3.62□□□□□ -1.83
RRP6YOR001W GUA1P38625 525 aaKnown RBP3.61□□□□□ -1.83
RRP6YOR001W MAM3Q12296 706 aa3.6□□□□□ -1.83
RRP6YOR001W ELP4Q02884 456 aaKnown RBP3.6□□□□□ -1.83
RRP6YOR001W AI4P03878 556 aa3.59□□□□□ -1.83
RRP6YOR001W MPH3P0CE00 602 aa3.59□□□□□ -1.83
RRP6YOR001W CHL1P22516 861 aaPredicted RBP3.59□□□□□ -1.83
RRP6YOR001W REF2P42073 533 aaPredicted RBP3.59□□□□□ -1.83
RRP6YOR001W YGR273CP53329 174 aa3.59□□□□□ -1.84
RRP6YOR001W PRE3P38624 215 aa3.58□□□□□ -1.84
RRP6YOR001W COX6P00427 148 aa3.57□□□□□ -1.84
RRP6YOR001W SOL3P38858 249 aa3.56□□□□□ -1.84
RRP6YOR001W YDR090CQ03193 310 aa3.56□□□□□ -1.84
RRP6YOR001W MID1P41821 548 aa3.55□□□□□ -1.84
RRP6YOR001W HPC2Q01448 625 aa3.55□□□□□ -1.84
RRP6YOR001W MAK21Q12176 1025 aaKnown RBP3.55□□□□□ -1.84
RRP6YOR001W BCK2P33306 851 aa3.55□□□□□ -1.84
RRP6YOR001W NST1P53935 1240 aa3.55□□□□□ -1.84
RRP6YOR001W RPP1BP10622 106 aaKnown RBP3.54□□□□□ -1.84
RRP6YOR001W KIC1P38692 1080 aa3.54□□□□□ -1.84
RRP6YOR001W ARH1P48360 493 aa3.54□□□□□ -1.84
RRP6YOR001W TFB3Q03290 321 aa3.54□□□□□ -1.84
RRP6YOR001W KEX1P09620 729 aa3.53□□□□□ -1.84
RRP6YOR001W UBP14P38237 781 aaKnown RBP3.53□□□□□ -1.84
RRP6YOR001W VHR2P40041 505 aa3.53□□□□□ -1.84
RRP6YOR001W NOP8Q08287 484 aaPredicted RBP3.53□□□□□ -1.84
RRP6YOR001W SPT23P35210 1082 aa3.52□□□□□ -1.85
RRP6YOR001W HAP5Q02516 242 aa3.52□□□□□ -1.85
RRP6YOR001W PKC1P24583 1151 aa3.52□□□□□ -1.85
RRP6YOR001W RAD54P32863 898 aa3.52□□□□□ -1.85
RRP6YOR001W ILV3P39522 585 aaKnown RBP3.52□□□□□ -1.85
RRP6YOR001W SLI15P38283 698 aa3.51□□□□□ -1.85
RRP6YOR001W GLN1P32288 370 aaKnown RBP3.51□□□□□ -1.85
RRP6YOR001W VRP1P37370 817 aa3.51□□□□□ -1.85
RRP6YOR001W YML020WQ03722 664 aa3.51□□□□□ -1.85
RRP6YOR001W DPL1Q05567 589 aa3.51□□□□□ -1.85
RRP6YOR001W YLR326WQ06170 240 aaKnown RBP3.51□□□□□ -1.85
RRP6YOR001W MPC54Q08550 464 aa3.51□□□□□ -1.85
RRP6YOR001W PTC2P39966 464 aaKnown RBP3.5□□□□□ -1.85
RRP6YOR001W ATF2P53296 535 aa3.5□□□□□ -1.85
RRP6YOR001W NMA111P53920 997 aa3.5□□□□□ -1.85
RRP6YOR001W SUB2Q07478 446 aaKnown RBP3.5□□□□□ -1.85
RRP6YOR001W KTR1P27810 393 aaKnown RBP3.49□□□□□ -1.85
RRP6YOR001W HGH1P48362 394 aaKnown RBP3.49□□□□□ -1.85
RRP6YOR001W BNI4P53858 892 aa3.48□□□□□ -1.85
RRP6YOR001W YDR344CQ05510 147 aa3.48□□□□□ -1.85
RRP6YOR001W ISU2Q12056 156 aa3.48□□□□□ -1.85
RRP6YOR001W PEX21P50091 288 aa3.47□□□□□ -1.85
RRP6YOR001W SSA1P10591 642 aaKnown RBP3.47□□□□□ -1.85
RRP6YOR001W GEF1P37020 779 aa3.47□□□□□ -1.85
RRP6YOR001W PCS60P38137 543 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
RRP6YOR001W XDJ1P39102 459 aa3.47□□□□□ -1.85
RRP6YOR001W ATG32P40458 529 aa3.47□□□□□ -1.85
RRP6YOR001W PSE1P32337 1089 aaKnown RBP3.46□□□□□ -1.86
RRP6YOR001W ORC6P38826 435 aa3.46□□□□□ -1.86
RRP6YOR001W BIM1P40013 344 aa3.46□□□□□ -1.86
RRP6YOR001W ORC1P54784 914 aaPredicted RBP3.46□□□□□ -1.86
RRP6YOR001W CDC73Q06697 393 aa3.46□□□□□ -1.86
RRP6YOR001W CSN12P47130 423 aa3.45□□□□□ -1.86
RRP6YOR001W ERG12P07277 443 aa3.44□□□□□ -1.86
RRP6YOR001W BRL1P38770 471 aa3.44□□□□□ -1.86
RRP6YOR001W YML082WQ04533 649 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms