RNA–Protein interactions for RNA: YNL116W

DMA2, Transcript of Ubiquitin-protein ligase (E3), yeast

Gene DMA2, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DMA2	YNL116W	TY1B-ML2	Q03434	1755 aa	Known RBP	11.41	□□□□□ -0.58
DMA2	YNL116W	TY1B-ER1	Q03612	1755 aa		11.41	□□□□□ -0.58
DMA2	YNL116W	TY1B-ML1	Q04711	1755 aa	Known RBP	11.41	□□□□□ -0.58
DMA2	YNL116W	TY1B-GR2	Q12269	1755 aa		11.41	□□□□□ -0.58
DMA2	YNL116W	TY1B-OL	Q12273	1755 aa		11.41	□□□□□ -0.58
DMA2	YNL116W	TY1B-PL	Q12414	1755 aa	Known RBP	11.41	□□□□□ -0.58
DMA2	YNL116W	DNF1	P32660	1571 aa		11.4	□□□□□ -0.58
DMA2	YNL116W	MET5	P47169	1442 aa		11.4	□□□□□ -0.58
DMA2	YNL116W	ULS1	Q08562	1619 aa		11.39	□□□□□ -0.59
DMA2	YNL116W	VPS15	P22219	1454 aa		11.37	□□□□□ -0.59
DMA2	YNL116W	RPA190	P10964	1664 aa	Known RBP	11.35	□□□□□ -0.59
DMA2	YNL116W	TY3B-G	Q99315	1547 aa		11.35	□□□□□ -0.59
DMA2	YNL116W	SRB8	P25648	1427 aa		11.35	□□□□□ -0.59
DMA2	YNL116W	YPR148C	Q06523	435 aa		11.34	□□□□□ -0.59
DMA2	YNL116W	LEU3	P08638	886 aa		11.33	□□□□□ -0.6
DMA2	YNL116W	YLR419W	Q06698	1435 aa	Known RBP	11.32	□□□□□ -0.6
DMA2	YNL116W	NUP159	P40477	1460 aa		11.32	□□□□□ -0.6
DMA2	YNL116W	PSD2	P53037	1138 aa	Known RBP	11.29	□□□□□ -0.6
DMA2	YNL116W	MHP1	P43638	1398 aa		11.29	□□□□□ -0.6
DMA2	YNL116W	RQC2	Q12532	1038 aa	Known RBP	11.27	□□□□□ -0.61
DMA2	YNL116W	NOP7	P53261	605 aa	Known RBP	11.23	□□□□□ -0.61
DMA2	YNL116W	LTE1	P07866	1435 aa		11.23	□□□□□ -0.61
DMA2	YNL116W	SNT2	P53127	1403 aa		11.22	□□□□□ -0.61
DMA2	YNL116W	CFT1	Q06632	1357 aa	Known RBP	11.2	□□□□□ -0.62
DMA2	YNL116W	CAT8	P39113	1433 aa		11.2	□□□□□ -0.62
DMA2	YNL116W	VTH1	P40438	1549 aa		11.19	□□□□□ -0.62
DMA2	YNL116W	VTH2	P40890	1549 aa		11.19	□□□□□ -0.62
DMA2	YNL116W	TY1B-JR2	P47100	1755 aa	Known RBP	11.19	□□□□□ -0.62
DMA2	YNL116W	TY1B-ER2	Q03619	1755 aa		11.19	□□□□□ -0.62
DMA2	YNL116W	TY1B-MR1	Q04214	1755 aa		11.19	□□□□□ -0.62
DMA2	YNL116W	TY1B-MR2	Q04670	1755 aa	Known RBP	11.19	□□□□□ -0.62
DMA2	YNL116W	TY1B-LR1	Q12088	1755 aa	Known RBP	11.19	□□□□□ -0.62
DMA2	YNL116W	TY1B-NL1	Q12112	1755 aa		11.19	□□□□□ -0.62
DMA2	YNL116W	TY1B-GR1	Q12141	1755 aa		11.19	□□□□□ -0.62
DMA2	YNL116W	TY1B-BL	Q12490	1755 aa		11.19	□□□□□ -0.62
DMA2	YNL116W	YBT1	P32386	1661 aa		11.18	□□□□□ -0.62
DMA2	YNL116W	IME2	P32581	645 aa		11.18	□□□□□ -0.62
DMA2	YNL116W	CLC1	P17891	233 aa		11.17	□□□□□ -0.62
DMA2	YNL116W	GCN2	P15442	1659 aa		11.17	□□□□□ -0.62
DMA2	YNL116W	NTE1	Q04958	1679 aa		11.15	□□□□□ -0.62
DMA2	YNL116W	RPC31	P17890	251 aa		11.13	□□□□□ -0.63
DMA2	YNL116W	PDR5	P33302	1511 aa	Known RBP	11.11	□□□□□ -0.63
DMA2	YNL116W	YRF1-1	P0CX20	1796 aa		11.11	□□□□□ -0.63
DMA2	YNL116W	YRF1-5	P0CX21	1796 aa		11.11	□□□□□ -0.63
DMA2	YNL116W	YRF1-8	P0CX22	1796 aa		11.11	□□□□□ -0.63
DMA2	YNL116W	GEA2	P39993	1459 aa	Known RBP	11.11	□□□□□ -0.63
DMA2	YNL116W	RPO21	P04050	1733 aa	Known RBP	11.1	□□□□□ -0.63
DMA2	YNL116W	ORC1	P54784	914 aa	Predicted RBP	11.1	□□□□□ -0.63
DMA2	YNL116W	IRC20	Q06554	1556 aa		11.09	□□□□□ -0.63
DMA2	YNL116W	YFR016C	P43597	1233 aa	Known RBP	11.09	□□□□□ -0.63
DMA2	YNL116W	EAF7	P53911	425 aa	Known RBP	11.09	□□□□□ -0.63
DMA2	YNL116W	OPY1	P38271	328 aa		11.07	□□□□□ -0.64
DMA2	YNL116W	BNI1	P41832	1953 aa		11.07	□□□□□ -0.64
DMA2	YNL116W	PDS5	Q04264	1277 aa		11.06	□□□□□ -0.64
DMA2	YNL116W	PAF1	P38351	445 aa		11.05	□□□□□ -0.64
DMA2	YNL116W	BUD21	Q08492	214 aa	Predicted RBP	11.03	□□□□□ -0.64
DMA2	YNL116W	FPR3	P38911	411 aa	Known RBP	11.02	□□□□□ -0.65
DMA2	YNL116W	CKB1	P43639	278 aa		11.02	□□□□□ -0.65
DMA2	YNL116W	GDB1	Q06625	1536 aa		11.01	□□□□□ -0.65
DMA2	YNL116W	MNN4	P36044	1178 aa		11.01	□□□□□ -0.65
DMA2	YNL116W	FUN12	P39730	1002 aa	Known RBP	11	□□□□□ -0.65
DMA2	YNL116W	TCB2	P48231	1178 aa		11	□□□□□ -0.65
DMA2	YNL116W	ARO1	P08566	1588 aa	Known RBP	11	□□□□□ -0.65
DMA2	YNL116W	RPP0	P05317	312 aa	Known RBP	10.99	□□□□□ -0.65
DMA2	YNL116W	CDC45	Q08032	650 aa		10.99	□□□□□ -0.65
DMA2	YNL116W	TY3B-I	Q7LHG5	1498 aa	Known RBP	10.99	□□□□□ -0.65
DMA2	YNL116W	VPS27	P40343	622 aa	Known RBP	10.97	□□□□□ -0.65
DMA2	YNL116W	MMS1	Q06211	1407 aa		10.95	□□□□□ -0.66
DMA2	YNL116W	SNF7	P39929	240 aa	Known RBP	10.94	□□□□□ -0.66
DMA2	YNL116W	YIR014W	P40570	242 aa		10.93	□□□□□ -0.66
DMA2	YNL116W	NST1	P53935	1240 aa		10.93	□□□□□ -0.66
DMA2	YNL116W	DRS2	P39524	1355 aa		10.92	□□□□□ -0.66
DMA2	YNL116W	ITT1	Q04638	464 aa		10.92	□□□□□ -0.66
DMA2	YNL116W	IQG1	Q12280	1495 aa		10.92	□□□□□ -0.66
DMA2	YNL116W	ABP1	P15891	592 aa	Known RBP	10.91	□□□□□ -0.66
DMA2	YNL116W	RVB2	Q12464	471 aa	Known RBP	10.91	□□□□□ -0.66
DMA2	YNL116W	PDR12	Q02785	1511 aa		10.9	□□□□□ -0.67
DMA2	YNL116W	SCT1	P32784	759 aa		10.89	□□□□□ -0.67
DMA2	YNL116W	YRB30	P53107	440 aa	Predicted RBP	10.86	□□□□□ -0.67
DMA2	YNL116W	SPO14	P36126	1683 aa		10.86	□□□□□ -0.67
DMA2	YNL116W	MET10	P39692	1035 aa		10.84	□□□□□ -0.67
DMA2	YNL116W	ROX1	P25042	368 aa		10.83	□□□□□ -0.68
DMA2	YNL116W	TAF5	P38129	798 aa		10.83	□□□□□ -0.68
DMA2	YNL116W	KIP3	P53086	805 aa	Known RBP	10.83	□□□□□ -0.68
DMA2	YNL116W	RTC1	Q08281	1341 aa		10.82	□□□□□ -0.68
DMA2	YNL116W	IOC4	Q04213	475 aa		10.82	□□□□□ -0.68
DMA2	YNL116W	RAV1	P47104	1357 aa		10.81	□□□□□ -0.68
DMA2	YNL116W	MIF2	P35201	549 aa		10.81	□□□□□ -0.68
DMA2	YNL116W	YSP2	Q06681	1438 aa		10.81	□□□□□ -0.68
DMA2	YNL116W	ESL2	P36168	1195 aa		10.8	□□□□□ -0.68
DMA2	YNL116W	YOR093C	Q12275	1648 aa		10.8	□□□□□ -0.68
DMA2	YNL116W	YDL144C	Q07589	356 aa		10.79	□□□□□ -0.68
DMA2	YNL116W	NUP157	P40064	1391 aa	Known RBP	10.78	□□□□□ -0.68
DMA2	YNL116W	BUD3	P25558	1636 aa		10.77	□□□□□ -0.68
DMA2	YNL116W	DNF2	Q12675	1612 aa		10.75	□□□□□ -0.69
DMA2	YNL116W	LEO1	P38439	464 aa		10.74	□□□□□ -0.69
DMA2	YNL116W	PCT1	P13259	424 aa		10.73	□□□□□ -0.69
DMA2	YNL116W	SUI2	P20459	304 aa	Known RBP	10.73	□□□□□ -0.69
DMA2	YNL116W	DOP1	Q03921	1698 aa		10.73	□□□□□ -0.69
DMA2	YNL116W	TRM3	Q07527	1436 aa		10.73	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms