RNA–Protein interactions for RNA: YNL105W

RRT16, Transcript of Dubious open reading frame, yeastyeast

Gene RRT16, Length 429 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT16YNL105W YEL023CP39992 682 aa7.43□□□□□ -1.22
RRT16YNL105W PTC4P38089 393 aa7.42□□□□□ -1.22
RRT16YNL105W YDL129WQ07555 291 aa7.4□□□□□ -1.22
RRT16YNL105W MAK11P20484 414 aaKnown RBP7.39□□□□□ -1.23
RRT16YNL105W CHL1P22516 861 aaPredicted RBP7.38□□□□□ -1.23
RRT16YNL105W RAM2P29703 316 aa7.38□□□□□ -1.23
RRT16YNL105W GRE2Q12068 342 aaKnown RBP7.38□□□□□ -1.23
RRT16YNL105W MIF2P35201 549 aa7.37□□□□□ -1.23
RRT16YNL105W PRE3P38624 215 aa7.35□□□□□ -1.23
RRT16YNL105W PTC3P34221 468 aaKnown RBP7.33□□□□□ -1.24
RRT16YNL105W EDS1P38073 919 aa7.33□□□□□ -1.24
RRT16YNL105W ATH1P48016 1211 aa7.32□□□□□ -1.24
RRT16YNL105W GUT1P32190 709 aa7.31□□□□□ -1.24
RRT16YNL105W COQ8P27697 501 aa7.28□□□□□ -1.24
RRT16YNL105W PML39Q03760 334 aa7.27□□□□□ -1.25
RRT16YNL105W VRP1P37370 817 aa7.24□□□□□ -1.25
RRT16YNL105W NST1P53935 1240 aa7.23□□□□□ -1.25
RRT16YNL105W XDJ1P39102 459 aa7.21□□□□□ -1.26
RRT16YNL105W YDR344CQ05510 147 aa7.21□□□□□ -1.26
RRT16YNL105W SOL3P38858 249 aa7.2□□□□□ -1.26
RRT16YNL105W MID1P41821 548 aa7.18□□□□□ -1.26
RRT16YNL105W ELP4Q02884 456 aaKnown RBP7.18□□□□□ -1.26
RRT16YNL105W NOP53Q12080 455 aaKnown RBP7.17□□□□□ -1.26
RRT16YNL105W AI4P03878 556 aa7.16□□□□□ -1.26
RRT16YNL105W DPS1P04802 557 aaKnown RBP7.16□□□□□ -1.26
RRT16YNL105W MPH3P0CE00 602 aa7.16□□□□□ -1.26
RRT16YNL105W ARH1P48360 493 aa7.16□□□□□ -1.26
RRT16YNL105W ILV3P39522 585 aaKnown RBP7.11□□□□□ -1.27
RRT16YNL105W YGR273CP53329 174 aa7.11□□□□□ -1.27
RRT16YNL105W PEX29Q03370 554 aa7.11□□□□□ -1.27
RRT16YNL105W RGA2Q06407 1009 aa7.11□□□□□ -1.27
RRT16YNL105W SPT23P35210 1082 aa7.07□□□□□ -1.28
RRT16YNL105W HAP5Q02516 242 aa7.05□□□□□ -1.28
RRT16YNL105W MPC54Q08550 464 aa7.03□□□□□ -1.28
RRT16YNL105W BNI4P53858 892 aa7.01□□□□□ -1.29
RRT16YNL105W SRC1Q03707 834 aa7.01□□□□□ -1.29
RRT16YNL105W SLI15P38283 698 aa7□□□□□ -1.29
RRT16YNL105W SET1P38827 1080 aaKnown RBP6.98□□□□□ -1.29
RRT16YNL105W NMA111P53920 997 aa6.98□□□□□ -1.29
RRT16YNL105W PTC2P39966 464 aaKnown RBP6.97□□□□□ -1.29
RRT16YNL105W YML082WQ04533 649 aaKnown RBP6.97□□□□□ -1.29
RRT16YNL105W KEX1P09620 729 aa6.96□□□□□ -1.3
RRT16YNL105W RGA1P39083 1007 aa6.96□□□□□ -1.3
RRT16YNL105W DPL1Q05567 589 aa6.96□□□□□ -1.3
RRT16YNL105W UBP14P38237 781 aaKnown RBP6.89□□□□□ -1.31
RRT16YNL105W YLR326WQ06170 240 aaKnown RBP6.89□□□□□ -1.31
RRT16YNL105W ISU2Q12056 156 aa6.89□□□□□ -1.31
RRT16YNL105W VHR2P40041 505 aa6.88□□□□□ -1.31
RRT16YNL105W CDC73Q06697 393 aa6.87□□□□□ -1.31
RRT16YNL105W RAM1P22007 431 aa6.84□□□□□ -1.31
RRT16YNL105W PCS60P38137 543 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
RRT16YNL105W YPR015CQ12531 247 aa6.84□□□□□ -1.31
RRT16YNL105W RAD54P32863 898 aa6.83□□□□□ -1.32
RRT16YNL105W IFH1P39520 1085 aa6.8□□□□□ -1.32
RRT16YNL105W RPP1BP10622 106 aaKnown RBP6.79□□□□□ -1.32
RRT16YNL105W PDR1P12383 1068 aa6.78□□□□□ -1.32
RRT16YNL105W RAS1P01119 309 aa6.77□□□□□ -1.33
RRT16YNL105W YDR090CQ03193 310 aa6.77□□□□□ -1.33
RRT16YNL105W GYP1Q08484 637 aa6.77□□□□□ -1.33
RRT16YNL105W KIC1P38692 1080 aa6.74□□□□□ -1.33
RRT16YNL105W YPR148CQ06523 435 aa6.73□□□□□ -1.33
RRT16YNL105W SAS4Q04003 481 aa6.72□□□□□ -1.33
RRT16YNL105W REF2P42073 533 aaPredicted RBP6.71□□□□□ -1.34
RRT16YNL105W AMS1P22855 1083 aa6.69□□□□□ -1.34
RRT16YNL105W PEX21P50091 288 aa6.69□□□□□ -1.34
RRT16YNL105W YRR1Q12172 810 aa6.68□□□□□ -1.34
RRT16YNL105W GAP1P19145 602 aaPredicted RBP6.67□□□□□ -1.34
RRT16YNL105W SDH2P21801 266 aa6.67□□□□□ -1.34
RRT16YNL105W CSC1Q06538 782 aa6.67□□□□□ -1.34
RRT16YNL105W TFB4Q12004 338 aa6.66□□□□□ -1.34
RRT16YNL105W TRK1P12685 1235 aa6.65□□□□□ -1.34
RRT16YNL105W VPS70P47161 811 aa6.65□□□□□ -1.34
RRT16YNL105W BUD20Q08004 166 aaPredicted RBP6.65□□□□□ -1.34
RRT16YNL105W TUM1Q08686 304 aaKnown RBP6.64□□□□□ -1.35
RRT16YNL105W PRT1P06103 763 aaKnown RBP6.63□□□□□ -1.35
RRT16YNL105W ORC6P38826 435 aa6.63□□□□□ -1.35
RRT16YNL105W MRF1P30775 413 aaPredicted RBP6.62□□□□□ -1.35
RRT16YNL105W STR2P47164 639 aa6.62□□□□□ -1.35
RRT16YNL105W MAK21Q12176 1025 aaKnown RBP6.62□□□□□ -1.35
RRT16YNL105W YEL077CQ3E7X8 1277 aa6.62□□□□□ -1.35
RRT16YNL105W COX6P00427 148 aa6.61□□□□□ -1.35
RRT16YNL105W NUD1P32336 851 aa6.61□□□□□ -1.35
RRT16YNL105W ISM1P48526 1002 aa6.61□□□□□ -1.35
RRT16YNL105W NPL4P33755 580 aa6.57□□□□□ -1.36
RRT16YNL105W MVP1P40959 511 aaKnown RBP6.56□□□□□ -1.36
RRT16YNL105W ERG12P07277 443 aa6.54□□□□□ -1.36
RRT16YNL105W GCD11P32481 527 aaKnown RBP6.53□□□□□ -1.36
RRT16YNL105W YPL062WQ02781 134 aa6.53□□□□□ -1.36
RRT16YNL105W TY1A-DR4O74302 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-HP0C2I4 478 aaKnown RBP6.52□□□□□ -1.37
RRT16YNL105W TY1A-AP0CX57 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-PR1P0CX58 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-ORP0CX59 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-PR2P0CX60 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-DR5P0CX65 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-ER2P0CX66 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-GR3P0CX67 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-LR1P0CX68 440 aa6.52□□□□□ -1.37
RRT16YNL105W TY1A-MR2P0CX69 440 aa6.52□□□□□ -1.37
RRT16YNL105W RGR1P19263 1082 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms