RNA–Protein interactions for RNA: YNL044W

YIP3, Transcript of Protein localized to COPII vesicles, yeastyeast

Gene YIP3, Length 531 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIP3YNL044W LDB19Q12502 818 aa10.13□□□□□ -0.79
YIP3YNL044W YPR148CQ06523 435 aa10.07□□□□□ -0.8
YIP3YNL044W YEL023CP39992 682 aa10.05□□□□□ -0.8
YIP3YNL044W YNL035CP53962 389 aaKnown RBP10.04□□□□□ -0.8
YIP3YNL044W JIP4Q03361 876 aa10.04□□□□□ -0.8
YIP3YNL044W RTG1P32607 177 aa10.03□□□□□ -0.8
YIP3YNL044W FKH1P40466 484 aa10.03□□□□□ -0.8
YIP3YNL044W SOL3P38858 249 aa10.01□□□□□ -0.81
YIP3YNL044W VPS70P47161 811 aa10.01□□□□□ -0.81
YIP3YNL044W SAS10Q12136 610 aaPredicted RBP10.01□□□□□ -0.81
YIP3YNL044W PTC4P38089 393 aa10□□□□□ -0.81
YIP3YNL044W YGR273CP53329 174 aa9.99□□□□□ -0.81
YIP3YNL044W SEC61P32915 480 aa9.98□□□□□ -0.81
YIP3YNL044W DAN4P47179 1161 aa9.98□□□□□ -0.81
YIP3YNL044W NST1P53935 1240 aa9.98□□□□□ -0.81
YIP3YNL044W AIR2Q12476 344 aaKnown RBP9.97□□□□□ -0.81
YIP3YNL044W NCR1Q12200 1170 aa9.94□□□□□ -0.82
YIP3YNL044W AI4P03878 556 aa9.92□□□□□ -0.82
YIP3YNL044W MPH3P0CE00 602 aa9.92□□□□□ -0.82
YIP3YNL044W TFG1P41895 735 aaPredicted RBP9.91□□□□□ -0.82
YIP3YNL044W CKB1P43639 278 aa9.89□□□□□ -0.83
YIP3YNL044W VHR2P40041 505 aa9.88□□□□□ -0.83
YIP3YNL044W REF2P42073 533 aaPredicted RBP9.88□□□□□ -0.83
YIP3YNL044W ILV3P39522 585 aaKnown RBP9.87□□□□□ -0.83
YIP3YNL044W YJL171CP46992 396 aa9.87□□□□□ -0.83
YIP3YNL044W KEX1P09620 729 aa9.85□□□□□ -0.83
YIP3YNL044W UBP14P38237 781 aaKnown RBP9.85□□□□□ -0.83
YIP3YNL044W YLR326WQ06170 240 aaKnown RBP9.85□□□□□ -0.83
YIP3YNL044W PML39Q03760 334 aa9.83□□□□□ -0.84
YIP3YNL044W YDL129WQ07555 291 aa9.83□□□□□ -0.84
YIP3YNL044W BMT6Q12291 365 aa9.81□□□□□ -0.84
YIP3YNL044W RAD54P32863 898 aa9.78□□□□□ -0.84
YIP3YNL044W SAP30P38429 201 aa9.78□□□□□ -0.84
YIP3YNL044W YDR090CQ03193 310 aa9.77□□□□□ -0.85
YIP3YNL044W PBS2P08018 668 aa9.76□□□□□ -0.85
YIP3YNL044W MID1P41821 548 aa9.76□□□□□ -0.85
YIP3YNL044W MAK21Q12176 1025 aaKnown RBP9.76□□□□□ -0.85
YIP3YNL044W PCS60P38137 543 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
YIP3YNL044W SLI15P38283 698 aa9.75□□□□□ -0.85
YIP3YNL044W KIC1P38692 1080 aa9.75□□□□□ -0.85
YIP3YNL044W COX6P00427 148 aa9.72□□□□□ -0.85
YIP3YNL044W SPB4P25808 606 aaPredicted RBP9.71□□□□□ -0.86
YIP3YNL044W PEX29Q03370 554 aa9.71□□□□□ -0.86
YIP3YNL044W DSF2P38213 736 aa9.68□□□□□ -0.86
YIP3YNL044W MPC54Q08550 464 aa9.66□□□□□ -0.86
YIP3YNL044W MAM3Q12296 706 aa9.65□□□□□ -0.86
YIP3YNL044W DPL1Q05567 589 aa9.63□□□□□ -0.87
YIP3YNL044W RPP1BP10622 106 aaKnown RBP9.62□□□□□ -0.87
YIP3YNL044W CDC73Q06697 393 aa9.62□□□□□ -0.87
YIP3YNL044W YDR344CQ05510 147 aa9.61□□□□□ -0.87
YIP3YNL044W ARH1P48360 493 aa9.6□□□□□ -0.87
YIP3YNL044W ELP4Q02884 456 aaKnown RBP9.6□□□□□ -0.87
YIP3YNL044W PRE3P38624 215 aa9.59□□□□□ -0.87
YIP3YNL044W IES2P40154 320 aa9.58□□□□□ -0.88
YIP3YNL044W CHL1P22516 861 aaPredicted RBP9.57□□□□□ -0.88
YIP3YNL044W NMA111P53920 997 aa9.57□□□□□ -0.88
YIP3YNL044W HAP5Q02516 242 aa9.57□□□□□ -0.88
YIP3YNL044W ORC6P38826 435 aa9.56□□□□□ -0.88
YIP3YNL044W ISU2Q12056 156 aa9.54□□□□□ -0.88
YIP3YNL044W GAP1P19145 602 aaPredicted RBP9.51□□□□□ -0.89
YIP3YNL044W NUP42P49686 430 aaKnown RBP9.51□□□□□ -0.89
YIP3YNL044W CSC1Q06538 782 aa9.51□□□□□ -0.89
YIP3YNL044W LEU3P08638 886 aa9.49□□□□□ -0.89
YIP3YNL044W SPT23P35210 1082 aa9.49□□□□□ -0.89
YIP3YNL044W PEX21P50091 288 aa9.49□□□□□ -0.89
YIP3YNL044W BNI4P53858 892 aa9.48□□□□□ -0.89
YIP3YNL044W TFB4Q12004 338 aa9.47□□□□□ -0.89
YIP3YNL044W DIT2P21595 489 aa9.46□□□□□ -0.9
YIP3YNL044W PSE1P32337 1089 aaKnown RBP9.46□□□□□ -0.9
YIP3YNL044W MVP1P40959 511 aaKnown RBP9.45□□□□□ -0.9
YIP3YNL044W RGR1P19263 1082 aa9.44□□□□□ -0.9
YIP3YNL044W PTC2P39966 464 aaKnown RBP9.43□□□□□ -0.9
YIP3YNL044W TUM1Q08686 304 aaKnown RBP9.42□□□□□ -0.9
YIP3YNL044W YRR1Q12172 810 aa9.41□□□□□ -0.9
YIP3YNL044W YNR021WP53723 404 aaKnown RBP9.4□□□□□ -0.9
YIP3YNL044W PDR1P12383 1068 aa9.38□□□□□ -0.91
YIP3YNL044W YPR109WQ06104 294 aa9.38□□□□□ -0.91
YIP3YNL044W YML082WQ04533 649 aaKnown RBP9.37□□□□□ -0.91
YIP3YNL044W BCK2P33306 851 aa9.36□□□□□ -0.91
YIP3YNL044W RAM1P22007 431 aa9.34□□□□□ -0.91
YIP3YNL044W CLB5P30283 435 aa9.34□□□□□ -0.91
YIP3YNL044W GLC3P32775 704 aa9.34□□□□□ -0.91
YIP3YNL044W VRP1P37370 817 aa9.33□□□□□ -0.92
YIP3YNL044W TEA1P47988 759 aa9.31□□□□□ -0.92
YIP3YNL044W ATF2P53296 535 aa9.31□□□□□ -0.92
YIP3YNL044W YPR015CQ12531 247 aa9.31□□□□□ -0.92
YIP3YNL044W NUD1P32336 851 aa9.3□□□□□ -0.92
YIP3YNL044W RPN1P38764 993 aaKnown RBP9.28□□□□□ -0.92
YIP3YNL044W AIM7Q12156 149 aa9.27□□□□□ -0.93
YIP3YNL044W NPL4P33755 580 aa9.26□□□□□ -0.93
YIP3YNL044W STR2P47164 639 aa9.25□□□□□ -0.93
YIP3YNL044W ISM1P48526 1002 aa9.24□□□□□ -0.93
YIP3YNL044W XDJ1P39102 459 aa9.21□□□□□ -0.94
YIP3YNL044W BUD20Q08004 166 aaPredicted RBP9.21□□□□□ -0.94
YIP3YNL044W NIS1P53939 407 aa9.2□□□□□ -0.94
YIP3YNL044W GYP1Q08484 637 aa9.19□□□□□ -0.94
YIP3YNL044W PRT1P06103 763 aaKnown RBP9.17□□□□□ -0.94
YIP3YNL044W GCD11P32481 527 aaKnown RBP9.17□□□□□ -0.94
YIP3YNL044W KEX2P13134 814 aa9.16□□□□□ -0.94
YIP3YNL044W KIN1P13185 1064 aa9.16□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms