RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C GYP5Q12344 894 aa6.74□□□□□ -1.33
SSN8YNL025C DPS1P04802 557 aaKnown RBP6.73□□□□□ -1.33
SSN8YNL025C YEL023CP39992 682 aa6.71□□□□□ -1.34
SSN8YNL025C DCW1P36091 449 aa6.69□□□□□ -1.34
SSN8YNL025C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
SSN8YNL025C ELP4Q02884 456 aaKnown RBP6.65□□□□□ -1.34
SSN8YNL025C SSP1P38871 571 aa6.63□□□□□ -1.35
SSN8YNL025C RGA1P39083 1007 aa6.62□□□□□ -1.35
SSN8YNL025C YDR344CQ05510 147 aa6.6□□□□□ -1.35
SSN8YNL025C PML39Q03760 334 aa6.59□□□□□ -1.35
SSN8YNL025C CST9Q06032 482 aa6.59□□□□□ -1.35
SSN8YNL025C MGA2P40578 1113 aa6.54□□□□□ -1.36
SSN8YNL025C ARH1P48360 493 aa6.54□□□□□ -1.36
SSN8YNL025C RCR1P38212 213 aa6.53□□□□□ -1.36
SSN8YNL025C SRC1Q03707 834 aa6.53□□□□□ -1.36
SSN8YNL025C SPT23P35210 1082 aa6.48□□□□□ -1.37
SSN8YNL025C GRE2Q12068 342 aaKnown RBP6.48□□□□□ -1.37
SSN8YNL025C MID1P41821 548 aa6.42□□□□□ -1.38
SSN8YNL025C PEX29Q03370 554 aa6.41□□□□□ -1.38
SSN8YNL025C ATH1P48016 1211 aa6.39□□□□□ -1.39
SSN8YNL025C HAP5Q02516 242 aa6.39□□□□□ -1.39
SSN8YNL025C GUT1P32190 709 aa6.38□□□□□ -1.39
SSN8YNL025C YML082WQ04533 649 aaKnown RBP6.37□□□□□ -1.39
SSN8YNL025C PTC2P39966 464 aaKnown RBP6.36□□□□□ -1.39
SSN8YNL025C BNI4P53858 892 aa6.36□□□□□ -1.39
SSN8YNL025C MIF2P35201 549 aa6.32□□□□□ -1.4
SSN8YNL025C NST1P53935 1240 aa6.32□□□□□ -1.4
SSN8YNL025C AI4P03878 556 aa6.3□□□□□ -1.4
SSN8YNL025C PTC3P34221 468 aaKnown RBP6.29□□□□□ -1.4
SSN8YNL025C RAS1P01119 309 aa6.28□□□□□ -1.4
SSN8YNL025C MPH3P0CE00 602 aa6.28□□□□□ -1.4
SSN8YNL025C TRK1P12685 1235 aa6.24□□□□□ -1.41
SSN8YNL025C SOL3P38858 249 aa6.24□□□□□ -1.41
SSN8YNL025C MAK11P20484 414 aaKnown RBP6.23□□□□□ -1.41
SSN8YNL025C EDS1P38073 919 aa6.23□□□□□ -1.41
SSN8YNL025C MPC54Q08550 464 aa6.22□□□□□ -1.41
SSN8YNL025C NMA111P53920 997 aa6.2□□□□□ -1.42
SSN8YNL025C ILV3P39522 585 aaKnown RBP6.18□□□□□ -1.42
SSN8YNL025C YPL062WQ02781 134 aa6.18□□□□□ -1.42
SSN8YNL025C AMS1P22855 1083 aa6.17□□□□□ -1.42
SSN8YNL025C COQ8P27697 501 aa6.13□□□□□ -1.43
SSN8YNL025C RAM2P29703 316 aa6.13□□□□□ -1.43
SSN8YNL025C DPL1Q05567 589 aa6.13□□□□□ -1.43
SSN8YNL025C GYP1Q08484 637 aa6.13□□□□□ -1.43
SSN8YNL025C YPR015CQ12531 247 aa6.12□□□□□ -1.43
SSN8YNL025C YGR273CP53329 174 aa6.1□□□□□ -1.43
SSN8YNL025C RAM1P22007 431 aa6.08□□□□□ -1.44
SSN8YNL025C SLI15P38283 698 aa6.08□□□□□ -1.44
SSN8YNL025C NOP53Q12080 455 aaKnown RBP6.07□□□□□ -1.44
SSN8YNL025C SAS4Q04003 481 aa6.06□□□□□ -1.44
SSN8YNL025C ISU2Q12056 156 aa6.05□□□□□ -1.44
SSN8YNL025C YEL077CQ3E7X8 1277 aa6.04□□□□□ -1.44
SSN8YNL025C SDH2P21801 266 aa6□□□□□ -1.45
SSN8YNL025C GBP2P25555 427 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
SSN8YNL025C GAR1P28007 205 aaKnown RBP5.98□□□□□ -1.45
SSN8YNL025C MRF1P30775 413 aaPredicted RBP5.97□□□□□ -1.45
SSN8YNL025C BRE2P43132 505 aa5.96□□□□□ -1.46
SSN8YNL025C GCR2Q01722 534 aa5.96□□□□□ -1.46
SSN8YNL025C PDR1P12383 1068 aa5.93□□□□□ -1.46
SSN8YNL025C CDC73Q06697 393 aa5.91□□□□□ -1.46
SSN8YNL025C KEX1P09620 729 aa5.9□□□□□ -1.46
SSN8YNL025C ERG12P07277 443 aa5.85□□□□□ -1.47
SSN8YNL025C SET1P38827 1080 aaKnown RBP5.85□□□□□ -1.47
SSN8YNL025C RQC2Q12532 1038 aaKnown RBP5.85□□□□□ -1.47
SSN8YNL025C AIR1P40507 360 aaKnown RBP5.84□□□□□ -1.47
SSN8YNL025C PRT1P06103 763 aaKnown RBP5.83□□□□□ -1.48
SSN8YNL025C RPP1BP10622 106 aaKnown RBP5.83□□□□□ -1.48
SSN8YNL025C BUD20Q08004 166 aaPredicted RBP5.81□□□□□ -1.48
SSN8YNL025C IFH1P39520 1085 aa5.8□□□□□ -1.48
SSN8YNL025C CLA4P48562 842 aa5.78□□□□□ -1.48
SSN8YNL025C MET22P32179 357 aa5.77□□□□□ -1.49
SSN8YNL025C CST6P40535 587 aa5.77□□□□□ -1.49
SSN8YNL025C YLR326WQ06170 240 aaKnown RBP5.76□□□□□ -1.49
SSN8YNL025C ENV9Q08651 330 aa5.76□□□□□ -1.49
SSN8YNL025C UBP14P38237 781 aaKnown RBP5.75□□□□□ -1.49
SSN8YNL025C CDC4P07834 779 aa5.74□□□□□ -1.49
SSN8YNL025C RAD54P32863 898 aa5.73□□□□□ -1.49
SSN8YNL025C PCS60P38137 543 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49 RIP-Chip
SSN8YNL025C LAM6Q08001 693 aa5.73□□□□□ -1.49
SSN8YNL025C VHR2P40041 505 aa5.72□□□□□ -1.49
SSN8YNL025C STR2P47164 639 aa5.72□□□□□ -1.49
SSN8YNL025C YRR1Q12172 810 aa5.72□□□□□ -1.49
SSN8YNL025C PEX21P50091 288 aa5.71□□□□□ -1.5
SSN8YNL025C YDR444WQ04093 687 aa5.71□□□□□ -1.5
SSN8YNL025C YPR148CQ06523 435 aa5.71□□□□□ -1.5
SSN8YNL025C ISM1P48526 1002 aa5.7□□□□□ -1.5
SSN8YNL025C SPT16P32558 1035 aaKnown RBP5.69□□□□□ -1.5
SSN8YNL025C FRK1Q03002 865 aaPredicted RBP5.68□□□□□ -1.5
SSN8YNL025C NPL4P33755 580 aa5.67□□□□□ -1.5
SSN8YNL025C NUD1P32336 851 aa5.66□□□□□ -1.5
SSN8YNL025C REF2P42073 533 aaPredicted RBP5.65□□□□□ -1.5
SSN8YNL025C YDR090CQ03193 310 aa5.65□□□□□ -1.5
SSN8YNL025C TFB4Q12004 338 aa5.64□□□□□ -1.51
SSN8YNL025C GCD11P32481 527 aaKnown RBP5.63□□□□□ -1.51
SSN8YNL025C BDP1P46678 594 aa5.63□□□□□ -1.51
SSN8YNL025C MTC5Q03897 1148 aa5.63□□□□□ -1.51
SSN8YNL025C HED1Q03937 162 aa5.63□□□□□ -1.51
SSN8YNL025C LCB5Q06147 687 aaKnown RBP5.63□□□□□ -1.51
SSN8YNL025C YDL176WQ12027 708 aa5.63□□□□□ -1.51
SSN8YNL025C KIC1P38692 1080 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms