RNA–Protein interactions for RNA: YMR071C

TVP18, Transcript of Integral membrane protein, yeastyeast

Gene TVP18, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP18YMR071C SAP30P38429 201 aa5.86□□□□□ -1.47
TVP18YMR071C PTC4P38089 393 aa5.85□□□□□ -1.47
TVP18YMR071C YEL023CP39992 682 aa5.84□□□□□ -1.47
TVP18YMR071C YDL129WQ07555 291 aa5.83□□□□□ -1.48
TVP18YMR071C RAM2P29703 316 aa5.82□□□□□ -1.48
TVP18YMR071C MAK11P20484 414 aaKnown RBP5.81□□□□□ -1.48
TVP18YMR071C GRE2Q12068 342 aaKnown RBP5.81□□□□□ -1.48
TVP18YMR071C MIF2P35201 549 aa5.8□□□□□ -1.48
TVP18YMR071C EDS1P38073 919 aa5.79□□□□□ -1.48
TVP18YMR071C CHL1P22516 861 aaPredicted RBP5.78□□□□□ -1.48
TVP18YMR071C PTC3P34221 468 aaKnown RBP5.77□□□□□ -1.49
TVP18YMR071C PRE3P38624 215 aa5.77□□□□□ -1.49
TVP18YMR071C GUT1P32190 709 aa5.75□□□□□ -1.49
TVP18YMR071C ATH1P48016 1211 aa5.75□□□□□ -1.49
TVP18YMR071C BCK2P33306 851 aa5.74□□□□□ -1.49
TVP18YMR071C PML39Q03760 334 aa5.74□□□□□ -1.49
TVP18YMR071C COQ8P27697 501 aa5.73□□□□□ -1.49
TVP18YMR071C YDR344CQ05510 147 aa5.73□□□□□ -1.49
TVP18YMR071C NST1P53935 1240 aa5.72□□□□□ -1.49
TVP18YMR071C SOL3P38858 249 aa5.7□□□□□ -1.5
TVP18YMR071C MID1P41821 548 aa5.67□□□□□ -1.5
TVP18YMR071C ELP4Q02884 456 aaKnown RBP5.66□□□□□ -1.5
TVP18YMR071C MPH3P0CE00 602 aa5.65□□□□□ -1.5
TVP18YMR071C AI4P03878 556 aa5.64□□□□□ -1.51
TVP18YMR071C VRP1P37370 817 aa5.64□□□□□ -1.51
TVP18YMR071C ARH1P48360 493 aa5.64□□□□□ -1.51
TVP18YMR071C ILV3P39522 585 aaKnown RBP5.63□□□□□ -1.51
TVP18YMR071C NOP53Q12080 455 aaKnown RBP5.63□□□□□ -1.51
TVP18YMR071C XDJ1P39102 459 aa5.62□□□□□ -1.51
TVP18YMR071C RGA2Q06407 1009 aa5.61□□□□□ -1.51
TVP18YMR071C YGR273CP53329 174 aa5.6□□□□□ -1.51
TVP18YMR071C PEX29Q03370 554 aa5.59□□□□□ -1.51
TVP18YMR071C SPT23P35210 1082 aa5.57□□□□□ -1.52
TVP18YMR071C HAP5Q02516 242 aa5.55□□□□□ -1.52
TVP18YMR071C MPC54Q08550 464 aa5.54□□□□□ -1.52
TVP18YMR071C SLI15P38283 698 aa5.52□□□□□ -1.53
TVP18YMR071C BNI4P53858 892 aa5.52□□□□□ -1.53
TVP18YMR071C DPS1P04802 557 aaKnown RBP5.5□□□□□ -1.53
TVP18YMR071C NMA111P53920 997 aa5.5□□□□□ -1.53
TVP18YMR071C YML082WQ04533 649 aaKnown RBP5.5□□□□□ -1.53
TVP18YMR071C PTC2P39966 464 aaKnown RBP5.49□□□□□ -1.53
TVP18YMR071C SAS10Q12136 610 aaPredicted RBP5.49□□□□□ -1.53
TVP18YMR071C KEX1P09620 729 aa5.48□□□□□ -1.53
TVP18YMR071C SET1P38827 1080 aaKnown RBP5.48□□□□□ -1.53
TVP18YMR071C TAF7Q05021 590 aa5.48□□□□□ -1.53
TVP18YMR071C DPL1Q05567 589 aa5.48□□□□□ -1.53
TVP18YMR071C LEO1P38439 464 aa5.44□□□□□ -1.54
TVP18YMR071C UBP14P38237 781 aaKnown RBP5.43□□□□□ -1.54
TVP18YMR071C YLR326WQ06170 240 aaKnown RBP5.43□□□□□ -1.54
TVP18YMR071C CDC73Q06697 393 aa5.42□□□□□ -1.54
TVP18YMR071C ISU2Q12056 156 aa5.42□□□□□ -1.54
TVP18YMR071C YPR015CQ12531 247 aa5.42□□□□□ -1.54
TVP18YMR071C RAM1P22007 431 aa5.41□□□□□ -1.54
TVP18YMR071C VHR2P40041 505 aa5.41□□□□□ -1.54
TVP18YMR071C LEU3P08638 886 aa5.4□□□□□ -1.54
TVP18YMR071C PCS60P38137 543 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
TVP18YMR071C RGA1P39083 1007 aa5.39□□□□□ -1.55
TVP18YMR071C SRC1Q03707 834 aa5.38□□□□□ -1.55
TVP18YMR071C RAD54P32863 898 aa5.36□□□□□ -1.55
TVP18YMR071C PDR1P12383 1068 aa5.35□□□□□ -1.55
TVP18YMR071C IFH1P39520 1085 aa5.35□□□□□ -1.55
TVP18YMR071C RAS1P01119 309 aa5.34□□□□□ -1.55
TVP18YMR071C VPS70P47161 811 aa5.33□□□□□ -1.56
TVP18YMR071C YDR090CQ03193 310 aa5.33□□□□□ -1.56
TVP18YMR071C GYP1Q08484 637 aa5.33□□□□□ -1.56
TVP18YMR071C CKB1P43639 278 aa5.32□□□□□ -1.56
TVP18YMR071C YPR148CQ06523 435 aa5.32□□□□□ -1.56
TVP18YMR071C RPP1BP10622 106 aaKnown RBP5.31□□□□□ -1.56
TVP18YMR071C SPB4P25808 606 aaPredicted RBP5.31□□□□□ -1.56
TVP18YMR071C SDH2P21801 266 aa5.29□□□□□ -1.56
TVP18YMR071C SAS4Q04003 481 aa5.28□□□□□ -1.56
TVP18YMR071C AMS1P22855 1083 aa5.27□□□□□ -1.57
TVP18YMR071C KIC1P38692 1080 aa5.27□□□□□ -1.57
TVP18YMR071C GAP1P19145 602 aaPredicted RBP5.26□□□□□ -1.57
TVP18YMR071C REF2P42073 533 aaPredicted RBP5.26□□□□□ -1.57
TVP18YMR071C YRR1Q12172 810 aa5.26□□□□□ -1.57
TVP18YMR071C RPN1P38764 993 aaKnown RBP5.25□□□□□ -1.57
TVP18YMR071C BUD20Q08004 166 aaPredicted RBP5.25□□□□□ -1.57
TVP18YMR071C PEX21P50091 288 aa5.24□□□□□ -1.57
TVP18YMR071C CSC1Q06538 782 aa5.23□□□□□ -1.57
TVP18YMR071C TFB4Q12004 338 aa5.23□□□□□ -1.57
TVP18YMR071C STR2P47164 639 aa5.22□□□□□ -1.57
TVP18YMR071C TUM1Q08686 304 aaKnown RBP5.22□□□□□ -1.57
TVP18YMR071C PRT1P06103 763 aaKnown RBP5.21□□□□□ -1.58
TVP18YMR071C ORC6P38826 435 aa5.21□□□□□ -1.58
TVP18YMR071C ISM1P48526 1002 aa5.21□□□□□ -1.58
TVP18YMR071C PBS2P08018 668 aa5.2□□□□□ -1.58
TVP18YMR071C TRK1P12685 1235 aa5.2□□□□□ -1.58
TVP18YMR071C MRF1P30775 413 aaPredicted RBP5.2□□□□□ -1.58
TVP18YMR071C YEL077CQ3E7X8 1277 aa5.2□□□□□ -1.58
TVP18YMR071C COX6P00427 148 aa5.19□□□□□ -1.58
TVP18YMR071C NUD1P32336 851 aa5.19□□□□□ -1.58
TVP18YMR071C DSF2P38213 736 aa5.19□□□□□ -1.58
TVP18YMR071C MAK21Q12176 1025 aaKnown RBP5.17□□□□□ -1.58
TVP18YMR071C MVP1P40959 511 aaKnown RBP5.16□□□□□ -1.58
TVP18YMR071C TY1A-DR4O74302 440 aa5.15□□□□□ -1.59
TVP18YMR071C TY1A-HP0C2I4 478 aaKnown RBP5.15□□□□□ -1.59
TVP18YMR071C TY1A-AP0CX57 440 aa5.15□□□□□ -1.59
TVP18YMR071C TY1A-PR1P0CX58 440 aa5.15□□□□□ -1.59
TVP18YMR071C TY1A-ORP0CX59 440 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms