RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C ATH1P48016 1211 aa8.86□□□□□ -0.99
SUB1YMR039C SET1P38827 1080 aaKnown RBP8.84□□□□□ -0.99
SUB1YMR039C YNL035CP53962 389 aaKnown RBP8.83□□□□□ -1
SUB1YMR039C JIP4Q03361 876 aa8.82□□□□□ -1
SUB1YMR039C RTG1P32607 177 aa8.81□□□□□ -1
SUB1YMR039C SEC61P32915 480 aa8.8□□□□□ -1
SUB1YMR039C YEL023CP39992 682 aa8.79□□□□□ -1
SUB1YMR039C PTC4P38089 393 aa8.77□□□□□ -1.01
SUB1YMR039C DAN4P47179 1161 aa8.77□□□□□ -1.01
SUB1YMR039C DMA1P38823 416 aa8.75□□□□□ -1.01
SUB1YMR039C NCR1Q12200 1170 aa8.75□□□□□ -1.01
SUB1YMR039C SOL3P38858 249 aa8.72□□□□□ -1.01
SUB1YMR039C IFH1P39520 1085 aa8.72□□□□□ -1.01
SUB1YMR039C NST1P53935 1240 aa8.72□□□□□ -1.01
SUB1YMR039C TFG1P41895 735 aaPredicted RBP8.69□□□□□ -1.02
SUB1YMR039C YGR273CP53329 174 aa8.68□□□□□ -1.02
SUB1YMR039C YPR148CQ06523 435 aa8.68□□□□□ -1.02
SUB1YMR039C AI4P03878 556 aa8.66□□□□□ -1.02
SUB1YMR039C MPH3P0CE00 602 aa8.65□□□□□ -1.02
SUB1YMR039C RQC2Q12532 1038 aaKnown RBP8.65□□□□□ -1.02
SUB1YMR039C YDL129WQ07555 291 aa8.64□□□□□ -1.03
SUB1YMR039C ILV3P39522 585 aaKnown RBP8.59□□□□□ -1.03
SUB1YMR039C PML39Q03760 334 aa8.59□□□□□ -1.03
SUB1YMR039C SAP30P38429 201 aa8.58□□□□□ -1.04
SUB1YMR039C UBP14P38237 781 aaKnown RBP8.55□□□□□ -1.04
SUB1YMR039C VPS70P47161 811 aa8.55□□□□□ -1.04
SUB1YMR039C SAS10Q12136 610 aaPredicted RBP8.55□□□□□ -1.04
SUB1YMR039C KEX1P09620 729 aa8.54□□□□□ -1.04
SUB1YMR039C YLR326WQ06170 240 aaKnown RBP8.53□□□□□ -1.04
SUB1YMR039C VHR2P40041 505 aa8.52□□□□□ -1.05
SUB1YMR039C MID1P41821 548 aa8.51□□□□□ -1.05
SUB1YMR039C REF2P42073 533 aaPredicted RBP8.51□□□□□ -1.05
SUB1YMR039C SLI15P38283 698 aa8.49□□□□□ -1.05
SUB1YMR039C CKB1P43639 278 aa8.48□□□□□ -1.05
SUB1YMR039C CHL1P22516 861 aaPredicted RBP8.46□□□□□ -1.06
SUB1YMR039C RAD54P32863 898 aa8.46□□□□□ -1.06
SUB1YMR039C PRE3P38624 215 aa8.45□□□□□ -1.06
SUB1YMR039C YDR090CQ03193 310 aa8.45□□□□□ -1.06
SUB1YMR039C PEX29Q03370 554 aa8.45□□□□□ -1.06
SUB1YMR039C PCS60P38137 543 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
SUB1YMR039C MAK21Q12176 1025 aaKnown RBP8.44□□□□□ -1.06
SUB1YMR039C BCK2P33306 851 aa8.43□□□□□ -1.06
SUB1YMR039C ARH1P48360 493 aa8.43□□□□□ -1.06
SUB1YMR039C MPC54Q08550 464 aa8.43□□□□□ -1.06
SUB1YMR039C YDR344CQ05510 147 aa8.41□□□□□ -1.06
SUB1YMR039C KIC1P38692 1080 aa8.4□□□□□ -1.06
SUB1YMR039C ELP4Q02884 456 aaKnown RBP8.4□□□□□ -1.06
SUB1YMR039C COX6P00427 148 aa8.39□□□□□ -1.07
SUB1YMR039C DPL1Q05567 589 aa8.39□□□□□ -1.07
SUB1YMR039C HAP5Q02516 242 aa8.37□□□□□ -1.07
SUB1YMR039C PBS2P08018 668 aa8.36□□□□□ -1.07
SUB1YMR039C CDC73Q06697 393 aa8.35□□□□□ -1.07
SUB1YMR039C RPP1BP10622 106 aaKnown RBP8.34□□□□□ -1.07
SUB1YMR039C NMA111P53920 997 aa8.34□□□□□ -1.07
SUB1YMR039C SPT23P35210 1082 aa8.33□□□□□ -1.08
SUB1YMR039C BNI4P53858 892 aa8.32□□□□□ -1.08
SUB1YMR039C ISU2Q12056 156 aa8.32□□□□□ -1.08
SUB1YMR039C DSF2P38213 736 aa8.29□□□□□ -1.08
SUB1YMR039C GAP1P19145 602 aaPredicted RBP8.28□□□□□ -1.08
SUB1YMR039C ORC6P38826 435 aa8.27□□□□□ -1.09
SUB1YMR039C CSC1Q06538 782 aa8.26□□□□□ -1.09
SUB1YMR039C SPB4P25808 606 aaPredicted RBP8.25□□□□□ -1.09
SUB1YMR039C XDJ1P39102 459 aa8.25□□□□□ -1.09
SUB1YMR039C MAM3Q12296 706 aa8.25□□□□□ -1.09
SUB1YMR039C PTC2P39966 464 aaKnown RBP8.24□□□□□ -1.09
SUB1YMR039C YML082WQ04533 649 aaKnown RBP8.24□□□□□ -1.09
SUB1YMR039C TFB4Q12004 338 aa8.24□□□□□ -1.09
SUB1YMR039C VRP1P37370 817 aa8.23□□□□□ -1.09
SUB1YMR039C PEX21P50091 288 aa8.2□□□□□ -1.1
SUB1YMR039C IES2P40154 320 aa8.19□□□□□ -1.1
SUB1YMR039C RAM1P22007 431 aa8.18□□□□□ -1.1
SUB1YMR039C MVP1P40959 511 aaKnown RBP8.18□□□□□ -1.1
SUB1YMR039C RGR1P19263 1082 aa8.16□□□□□ -1.1
SUB1YMR039C PSE1P32337 1089 aaKnown RBP8.16□□□□□ -1.1
SUB1YMR039C NUP42P49686 430 aaKnown RBP8.16□□□□□ -1.1
SUB1YMR039C YRR1Q12172 810 aa8.16□□□□□ -1.1
SUB1YMR039C TUM1Q08686 304 aaKnown RBP8.15□□□□□ -1.1
SUB1YMR039C PDR1P12383 1068 aa8.14□□□□□ -1.11
SUB1YMR039C YPR015CQ12531 247 aa8.14□□□□□ -1.11
SUB1YMR039C YPR109WQ06104 294 aa8.11□□□□□ -1.11
SUB1YMR039C DIT2P21595 489 aa8.08□□□□□ -1.12
SUB1YMR039C CLB5P30283 435 aa8.07□□□□□ -1.12
SUB1YMR039C NUD1P32336 851 aa8.07□□□□□ -1.12
SUB1YMR039C DPS1P04802 557 aaKnown RBP8.05□□□□□ -1.12
SUB1YMR039C STR2P47164 639 aa8.04□□□□□ -1.12
SUB1YMR039C ISM1P48526 1002 aa8.04□□□□□ -1.12
SUB1YMR039C YNR021WP53723 404 aaKnown RBP8.03□□□□□ -1.12
SUB1YMR039C NPL4P33755 580 aa8.02□□□□□ -1.13
SUB1YMR039C SAS4Q04003 481 aa8.02□□□□□ -1.13
SUB1YMR039C BUD20Q08004 166 aaPredicted RBP8.02□□□□□ -1.13
SUB1YMR039C LEU3P08638 886 aa8.01□□□□□ -1.13
SUB1YMR039C GYP1Q08484 637 aa8.01□□□□□ -1.13
SUB1YMR039C TEA1P47988 759 aa8□□□□□ -1.13
SUB1YMR039C PRT1P06103 763 aaKnown RBP7.99□□□□□ -1.13
SUB1YMR039C TY1A-DR4O74302 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-HP0C2I4 478 aaKnown RBP7.95□□□□□ -1.14
SUB1YMR039C TY1A-AP0CX57 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-PR1P0CX58 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-ORP0CX59 440 aa7.95□□□□□ -1.14
SUB1YMR039C TY1A-PR2P0CX60 440 aa7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms