RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeastyeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA6YLR447C GRE2Q12068 342 aaKnown RBP9.89□□□□□ -0.83
VMA6YLR447C PTC4P38089 393 aa9.85□□□□□ -0.83
VMA6YLR447C YEL023CP39992 682 aa9.85□□□□□ -0.83
VMA6YLR447C ATH1P48016 1211 aa9.84□□□□□ -0.83
VMA6YLR447C DAN4P47179 1161 aa9.83□□□□□ -0.84
VMA6YLR447C PTC3P34221 468 aaKnown RBP9.82□□□□□ -0.84
VMA6YLR447C COQ8P27697 501 aa9.81□□□□□ -0.84
VMA6YLR447C GUT1P32190 709 aa9.79□□□□□ -0.84
VMA6YLR447C EDS1P38073 919 aa9.79□□□□□ -0.84
VMA6YLR447C SAP30P38429 201 aa9.76□□□□□ -0.85
VMA6YLR447C YDL129WQ07555 291 aa9.76□□□□□ -0.85
VMA6YLR447C NOP53Q12080 455 aaKnown RBP9.71□□□□□ -0.86
VMA6YLR447C PML39Q03760 334 aa9.65□□□□□ -0.86
VMA6YLR447C CHL1P22516 861 aaPredicted RBP9.62□□□□□ -0.87
VMA6YLR447C PRE3P38624 215 aa9.59□□□□□ -0.87
VMA6YLR447C AI4P03878 556 aa9.57□□□□□ -0.88
VMA6YLR447C SOL3P38858 249 aa9.57□□□□□ -0.88
VMA6YLR447C MPH3P0CE00 602 aa9.56□□□□□ -0.88
VMA6YLR447C NST1P53935 1240 aa9.56□□□□□ -0.88
VMA6YLR447C SET1P38827 1080 aaKnown RBP9.55□□□□□ -0.88
VMA6YLR447C YGR273CP53329 174 aa9.53□□□□□ -0.88
VMA6YLR447C ELP4Q02884 456 aaKnown RBP9.52□□□□□ -0.89
VMA6YLR447C PEX29Q03370 554 aa9.52□□□□□ -0.89
VMA6YLR447C BCK2P33306 851 aa9.5□□□□□ -0.89
VMA6YLR447C MID1P41821 548 aa9.5□□□□□ -0.89
VMA6YLR447C ARH1P48360 493 aa9.45□□□□□ -0.9
VMA6YLR447C ILV3P39522 585 aaKnown RBP9.41□□□□□ -0.9
VMA6YLR447C IFH1P39520 1085 aa9.4□□□□□ -0.9
VMA6YLR447C YDR344CQ05510 147 aa9.4□□□□□ -0.9
VMA6YLR447C VRP1P37370 817 aa9.38□□□□□ -0.91
VMA6YLR447C SPT23P35210 1082 aa9.37□□□□□ -0.91
VMA6YLR447C HAP5Q02516 242 aa9.37□□□□□ -0.91
VMA6YLR447C KEX1P09620 729 aa9.35□□□□□ -0.91
VMA6YLR447C SLI15P38283 698 aa9.35□□□□□ -0.91
VMA6YLR447C MPC54Q08550 464 aa9.34□□□□□ -0.91
VMA6YLR447C VHR2P40041 505 aa9.31□□□□□ -0.92
VMA6YLR447C DPL1Q05567 589 aa9.31□□□□□ -0.92
VMA6YLR447C XDJ1P39102 459 aa9.3□□□□□ -0.92
VMA6YLR447C NMA111P53920 997 aa9.3□□□□□ -0.92
VMA6YLR447C BNI4P53858 892 aa9.29□□□□□ -0.92
VMA6YLR447C PTC2P39966 464 aaKnown RBP9.28□□□□□ -0.92
VMA6YLR447C YLR326WQ06170 240 aaKnown RBP9.28□□□□□ -0.92
VMA6YLR447C UBP14P38237 781 aaKnown RBP9.27□□□□□ -0.93
VMA6YLR447C RPP1BP10622 106 aaKnown RBP9.25□□□□□ -0.93
VMA6YLR447C RAD54P32863 898 aa9.25□□□□□ -0.93
VMA6YLR447C KIC1P38692 1080 aa9.23□□□□□ -0.93
VMA6YLR447C YML082WQ04533 649 aaKnown RBP9.22□□□□□ -0.93
VMA6YLR447C ISU2Q12056 156 aa9.22□□□□□ -0.93
VMA6YLR447C PCS60P38137 543 aaKnown RBP RIP-Chip data9.21□□□□□ -0.94not detected
VMA6YLR447C YPR148CQ06523 435 aa9.2□□□□□ -0.94
VMA6YLR447C CDC73Q06697 393 aa9.19□□□□□ -0.94
VMA6YLR447C REF2P42073 533 aaPredicted RBP9.18□□□□□ -0.94
VMA6YLR447C VPS70P47161 811 aa9.17□□□□□ -0.94
VMA6YLR447C YDR090CQ03193 310 aa9.13□□□□□ -0.95
VMA6YLR447C DPS1P04802 557 aaKnown RBP9.1□□□□□ -0.95
VMA6YLR447C PEX21P50091 288 aa9.1□□□□□ -0.95
VMA6YLR447C MAK21Q12176 1025 aaKnown RBP9.07□□□□□ -0.96
VMA6YLR447C GYP1Q08484 637 aa9.04□□□□□ -0.96
VMA6YLR447C COX6P00427 148 aa9.03□□□□□ -0.96
VMA6YLR447C RAM1P22007 431 aa9.03□□□□□ -0.96
VMA6YLR447C CKB1P43639 278 aa9.03□□□□□ -0.96
VMA6YLR447C CSC1Q06538 782 aa9.03□□□□□ -0.96
VMA6YLR447C PDR1P12383 1068 aa9.02□□□□□ -0.97
VMA6YLR447C YPR015CQ12531 247 aa9.02□□□□□ -0.97
VMA6YLR447C DMA1P38823 416 aa9.01□□□□□ -0.97
VMA6YLR447C TFB4Q12004 338 aa9□□□□□ -0.97
VMA6YLR447C YRR1Q12172 810 aa8.99□□□□□ -0.97
VMA6YLR447C SAS4Q04003 481 aa8.97□□□□□ -0.97
VMA6YLR447C TUM1Q08686 304 aaKnown RBP8.96□□□□□ -0.98
VMA6YLR447C GAP1P19145 602 aaPredicted RBP8.95□□□□□ -0.98
VMA6YLR447C ORC6P38826 435 aa8.94□□□□□ -0.98
VMA6YLR447C PBS2P08018 668 aa8.93□□□□□ -0.98
VMA6YLR447C NPL4P33755 580 aa8.92□□□□□ -0.98
VMA6YLR447C PRT1P06103 763 aaKnown RBP8.88□□□□□ -0.99
VMA6YLR447C MRF1P30775 413 aaPredicted RBP8.88□□□□□ -0.99
VMA6YLR447C NUD1P32336 851 aa8.88□□□□□ -0.99
VMA6YLR447C MVP1P40959 511 aaKnown RBP8.88□□□□□ -0.99
VMA6YLR447C BUD20Q08004 166 aaPredicted RBP8.87□□□□□ -0.99
VMA6YLR447C SAS10Q12136 610 aaPredicted RBP8.86□□□□□ -0.99
VMA6YLR447C RAS1P01119 309 aa8.84□□□□□ -0.99
VMA6YLR447C RGR1P19263 1082 aa8.84□□□□□ -0.99
VMA6YLR447C AMS1P22855 1083 aa8.84□□□□□ -0.99
VMA6YLR447C STR2P47164 639 aa8.84□□□□□ -0.99
VMA6YLR447C YPR109WQ06104 294 aa8.84□□□□□ -0.99
VMA6YLR447C ISM1P48526 1002 aa8.83□□□□□ -1
VMA6YLR447C MAM3Q12296 706 aa8.83□□□□□ -1
VMA6YLR447C YEL077CQ3E7X8 1277 aa8.83□□□□□ -1
VMA6YLR447C GCD11P32481 527 aaKnown RBP8.81□□□□□ -1
VMA6YLR447C SPB4P25808 606 aaPredicted RBP8.8□□□□□ -1
VMA6YLR447C PSE1P32337 1089 aaKnown RBP8.79□□□□□ -1
VMA6YLR447C ERG12P07277 443 aa8.78□□□□□ -1
VMA6YLR447C DSF2P38213 736 aa8.77□□□□□ -1.01
VMA6YLR447C SPT16P32558 1035 aaKnown RBP8.76□□□□□ -1.01
VMA6YLR447C SRC1Q03707 834 aa8.76□□□□□ -1.01
VMA6YLR447C SDH2P21801 266 aa8.74□□□□□ -1.01
VMA6YLR447C PAT1P25644 796 aaKnown RBP8.74□□□□□ -1.01
VMA6YLR447C CLB5P30283 435 aa8.73□□□□□ -1.01
VMA6YLR447C IES2P40154 320 aa8.73□□□□□ -1.01
VMA6YLR447C TY1A-DR4O74302 440 aa8.69□□□□□ -1.02
VMA6YLR447C TY1A-HP0C2I4 478 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms