RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W PTC4P38089 393 aa8.65□□□□□ -1.02
CST9YLR394W CHL1P22516 861 aaPredicted RBP8.64□□□□□ -1.03
CST9YLR394W BCK2P33306 851 aa8.63□□□□□ -1.03
CST9YLR394W YEL023CP39992 682 aa8.63□□□□□ -1.03
CST9YLR394W PRE3P38624 215 aa8.61□□□□□ -1.03
CST9YLR394W GRE2Q12068 342 aaKnown RBP8.53□□□□□ -1.04
CST9YLR394W PML39Q03760 334 aa8.46□□□□□ -1.05
CST9YLR394W MAK11P20484 414 aaKnown RBP8.46□□□□□ -1.06
CST9YLR394W MIF2P35201 549 aa8.45□□□□□ -1.06
CST9YLR394W GUT1P32190 709 aa8.44□□□□□ -1.06
CST9YLR394W ATH1P48016 1211 aa8.43□□□□□ -1.06
CST9YLR394W YDR344CQ05510 147 aa8.43□□□□□ -1.06
CST9YLR394W PTC3P34221 468 aaKnown RBP8.42□□□□□ -1.06
CST9YLR394W VRP1P37370 817 aa8.42□□□□□ -1.06
CST9YLR394W XDJ1P39102 459 aa8.42□□□□□ -1.06
CST9YLR394W RAM2P29703 316 aa8.41□□□□□ -1.06
CST9YLR394W EDS1P38073 919 aa8.41□□□□□ -1.06
CST9YLR394W ELP4Q02884 456 aaKnown RBP8.41□□□□□ -1.06
CST9YLR394W NST1P53935 1240 aa8.37□□□□□ -1.07
CST9YLR394W ARH1P48360 493 aa8.37□□□□□ -1.07
CST9YLR394W COQ8P27697 501 aa8.32□□□□□ -1.08
CST9YLR394W MID1P41821 548 aa8.32□□□□□ -1.08
CST9YLR394W SOL3P38858 249 aa8.3□□□□□ -1.08
CST9YLR394W MPH3P0CE00 602 aa8.29□□□□□ -1.08
CST9YLR394W AI4P03878 556 aa8.29□□□□□ -1.08
CST9YLR394W SPT23P35210 1082 aa8.26□□□□□ -1.09
CST9YLR394W DPS1P04802 557 aaKnown RBP8.25□□□□□ -1.09
CST9YLR394W PEX29Q03370 554 aa8.25□□□□□ -1.09
CST9YLR394W NOP53Q12080 455 aaKnown RBP8.22□□□□□ -1.09
CST9YLR394W ILV3P39522 585 aaKnown RBP8.21□□□□□ -1.09
CST9YLR394W HAP5Q02516 242 aa8.21□□□□□ -1.09
CST9YLR394W YGR273CP53329 174 aa8.18□□□□□ -1.1
CST9YLR394W BNI4P53858 892 aa8.18□□□□□ -1.1
CST9YLR394W YML082WQ04533 649 aaKnown RBP8.15□□□□□ -1.1
CST9YLR394W MPC54Q08550 464 aa8.14□□□□□ -1.11
CST9YLR394W PTC2P39966 464 aaKnown RBP8.13□□□□□ -1.11
CST9YLR394W NMA111P53920 997 aa8.09□□□□□ -1.11
CST9YLR394W SLI15P38283 698 aa8.07□□□□□ -1.12
CST9YLR394W SRC1Q03707 834 aa8.05□□□□□ -1.12
CST9YLR394W DPL1Q05567 589 aa8.05□□□□□ -1.12
CST9YLR394W KEX1P09620 729 aa7.98□□□□□ -1.13
CST9YLR394W ISU2Q12056 156 aa7.96□□□□□ -1.13
CST9YLR394W YPR015CQ12531 247 aa7.95□□□□□ -1.14
CST9YLR394W RAM1P22007 431 aa7.94□□□□□ -1.14
CST9YLR394W RAS1P01119 309 aa7.92□□□□□ -1.14
CST9YLR394W CDC73Q06697 393 aa7.9□□□□□ -1.14
CST9YLR394W YLR326WQ06170 240 aaKnown RBP7.87□□□□□ -1.15
CST9YLR394W GYP1Q08484 637 aa7.87□□□□□ -1.15
CST9YLR394W UBP14P38237 781 aaKnown RBP7.86□□□□□ -1.15
CST9YLR394W SET1P38827 1080 aaKnown RBP7.86□□□□□ -1.15
CST9YLR394W RGA2Q06407 1009 aa7.85□□□□□ -1.15
CST9YLR394W AMS1P22855 1083 aa7.84□□□□□ -1.15
CST9YLR394W VHR2P40041 505 aa7.83□□□□□ -1.16
CST9YLR394W SAS4Q04003 481 aa7.83□□□□□ -1.16
CST9YLR394W PDR1P12383 1068 aa7.82□□□□□ -1.16
CST9YLR394W PCS60P38137 543 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16 RIP-Chip
CST9YLR394W RGA1P39083 1007 aa7.82□□□□□ -1.16
CST9YLR394W RPP1BP10622 106 aaKnown RBP7.79□□□□□ -1.16
CST9YLR394W RAD54P32863 898 aa7.79□□□□□ -1.16
CST9YLR394W TRK1P12685 1235 aa7.78□□□□□ -1.16
CST9YLR394W SDH2P21801 266 aa7.78□□□□□ -1.16
CST9YLR394W YEL077CQ3E7X8 1277 aa7.72□□□□□ -1.17
CST9YLR394W MRF1P30775 413 aaPredicted RBP7.69□□□□□ -1.18
CST9YLR394W YDR090CQ03193 310 aa7.69□□□□□ -1.18
CST9YLR394W BUD20Q08004 166 aaPredicted RBP7.68□□□□□ -1.18
CST9YLR394W KIC1P38692 1080 aa7.67□□□□□ -1.18
CST9YLR394W IFH1P39520 1085 aa7.67□□□□□ -1.18
CST9YLR394W YRR1Q12172 810 aa7.67□□□□□ -1.18
CST9YLR394W PRT1P06103 763 aaKnown RBP7.66□□□□□ -1.18
CST9YLR394W PEX21P50091 288 aa7.66□□□□□ -1.18
CST9YLR394W GAP1P19145 602 aaPredicted RBP7.65□□□□□ -1.18
CST9YLR394W DMA1P38823 416 aa7.65□□□□□ -1.18
CST9YLR394W TFB4Q12004 338 aa7.64□□□□□ -1.19
CST9YLR394W RQC2Q12532 1038 aaKnown RBP7.64□□□□□ -1.19
CST9YLR394W STR2P47164 639 aa7.63□□□□□ -1.19
CST9YLR394W CSC1Q06538 782 aa7.63□□□□□ -1.19
CST9YLR394W ISM1P48526 1002 aa7.61□□□□□ -1.19
CST9YLR394W ERG12P07277 443 aa7.59□□□□□ -1.19
CST9YLR394W NUD1P32336 851 aa7.59□□□□□ -1.19
CST9YLR394W TUM1Q08686 304 aaKnown RBP7.59□□□□□ -1.19
CST9YLR394W REF2P42073 533 aaPredicted RBP7.58□□□□□ -1.2
CST9YLR394W YPR148CQ06523 435 aa7.56□□□□□ -1.2
CST9YLR394W NPL4P33755 580 aa7.55□□□□□ -1.2
CST9YLR394W ORC6P38826 435 aa7.54□□□□□ -1.2
CST9YLR394W CST6P40535 587 aa7.52□□□□□ -1.2
CST9YLR394W YPL062WQ02781 134 aa7.52□□□□□ -1.2
CST9YLR394W BRE2P43132 505 aa7.52□□□□□ -1.21
CST9YLR394W AIR1P40507 360 aaKnown RBP7.51□□□□□ -1.21
CST9YLR394W TY1A-DR4O74302 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-HP0C2I4 478 aaKnown RBP7.5□□□□□ -1.21
CST9YLR394W TY1A-AP0CX57 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-PR1P0CX58 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-ORP0CX59 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-PR2P0CX60 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-DR5P0CX65 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-ER2P0CX66 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-GR3P0CX67 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-LR1P0CX68 440 aa7.5□□□□□ -1.21
CST9YLR394W TY1A-MR2P0CX69 440 aa7.5□□□□□ -1.21
CST9YLR394W GCD11P32481 527 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms