RNA–Protein interactions for RNA: YLR325C

RPL38, Transcript of Ribosomal 60S subunit protein L38, yeastyeast

Gene RPL38, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL38YLR325C FKH1P40466 484 aa4.86□□□□□ -1.63
RPL38YLR325C YNL035CP53962 389 aaKnown RBP4.86□□□□□ -1.63
RPL38YLR325C GUT1P32190 709 aa4.85□□□□□ -1.63
RPL38YLR325C ABP1P15891 592 aaKnown RBP4.84□□□□□ -1.63
RPL38YLR325C TFG1P41895 735 aaPredicted RBP4.84□□□□□ -1.63
RPL38YLR325C PTC4P38089 393 aa4.83□□□□□ -1.64
RPL38YLR325C SEC61P32915 480 aa4.82□□□□□ -1.64
RPL38YLR325C DMA1P38823 416 aa4.82□□□□□ -1.64
RPL38YLR325C JIP4Q03361 876 aa4.82□□□□□ -1.64
RPL38YLR325C BMT6Q12291 365 aa4.82□□□□□ -1.64
RPL38YLR325C DAN4P47179 1161 aa4.81□□□□□ -1.64
RPL38YLR325C SAP30P38429 201 aa4.8□□□□□ -1.64
RPL38YLR325C SOL3P38858 249 aa4.79□□□□□ -1.64
RPL38YLR325C PML39Q03760 334 aa4.78□□□□□ -1.64
RPL38YLR325C NOP53Q12080 455 aaKnown RBP4.77□□□□□ -1.65
RPL38YLR325C MID1P41821 548 aa4.75□□□□□ -1.65
RPL38YLR325C YDL129WQ07555 291 aa4.75□□□□□ -1.65
RPL38YLR325C YGR273CP53329 174 aa4.74□□□□□ -1.65
RPL38YLR325C NST1P53935 1240 aa4.73□□□□□ -1.65
RPL38YLR325C MPH3P0CE00 602 aa4.72□□□□□ -1.65
RPL38YLR325C VHR2P40041 505 aa4.72□□□□□ -1.65
RPL38YLR325C VPS70P47161 811 aa4.72□□□□□ -1.65
RPL38YLR325C AI4P03878 556 aa4.7□□□□□ -1.66
RPL38YLR325C ILV3P39522 585 aaKnown RBP4.7□□□□□ -1.66
RPL38YLR325C PEX29Q03370 554 aa4.69□□□□□ -1.66
RPL38YLR325C YDR344CQ05510 147 aa4.69□□□□□ -1.66
RPL38YLR325C KEX1P09620 729 aa4.68□□□□□ -1.66
RPL38YLR325C IFH1P39520 1085 aa4.68□□□□□ -1.66
RPL38YLR325C ELP4Q02884 456 aaKnown RBP4.68□□□□□ -1.66
RPL38YLR325C UBP14P38237 781 aaKnown RBP4.67□□□□□ -1.66
RPL38YLR325C SLI15P38283 698 aa4.66□□□□□ -1.66
RPL38YLR325C YLR326WQ06170 240 aaKnown RBP4.66□□□□□ -1.66
RPL38YLR325C PRE3P38624 215 aa4.65□□□□□ -1.67
RPL38YLR325C CHL1P22516 861 aaPredicted RBP4.64□□□□□ -1.67
RPL38YLR325C PCS60P38137 543 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
RPL38YLR325C REF2P42073 533 aaPredicted RBP4.64□□□□□ -1.67
RPL38YLR325C RAD54P32863 898 aa4.63□□□□□ -1.67
RPL38YLR325C KIC1P38692 1080 aa4.63□□□□□ -1.67
RPL38YLR325C YPR148CQ06523 435 aa4.63□□□□□ -1.67
RPL38YLR325C MPC54Q08550 464 aa4.63□□□□□ -1.67
RPL38YLR325C NMA111P53920 997 aa4.62□□□□□ -1.67
RPL38YLR325C CDC73Q06697 393 aa4.62□□□□□ -1.67
RPL38YLR325C ARH1P48360 493 aa4.61□□□□□ -1.67
RPL38YLR325C YDR090CQ03193 310 aa4.61□□□□□ -1.67
RPL38YLR325C DPL1Q05567 589 aa4.61□□□□□ -1.67
RPL38YLR325C HAP5Q02516 242 aa4.6□□□□□ -1.67
RPL38YLR325C RQC2Q12532 1038 aaKnown RBP4.6□□□□□ -1.67
RPL38YLR325C VRP1P37370 817 aa4.59□□□□□ -1.67
RPL38YLR325C SPB4P25808 606 aaPredicted RBP4.58□□□□□ -1.68
RPL38YLR325C PBS2P08018 668 aa4.57□□□□□ -1.68
RPL38YLR325C BCK2P33306 851 aa4.57□□□□□ -1.68
RPL38YLR325C SPT23P35210 1082 aa4.57□□□□□ -1.68
RPL38YLR325C CKB1P43639 278 aa4.57□□□□□ -1.68
RPL38YLR325C COX6P00427 148 aa4.56□□□□□ -1.68
RPL38YLR325C ISU2Q12056 156 aa4.56□□□□□ -1.68
RPL38YLR325C PTC2P39966 464 aaKnown RBP4.55□□□□□ -1.68
RPL38YLR325C PEX21P50091 288 aa4.55□□□□□ -1.68
RPL38YLR325C SAS10Q12136 610 aaPredicted RBP4.55□□□□□ -1.68
RPL38YLR325C RPP1BP10622 106 aaKnown RBP4.54□□□□□ -1.68
RPL38YLR325C PDR1P12383 1068 aa4.53□□□□□ -1.68
RPL38YLR325C BNI4P53858 892 aa4.52□□□□□ -1.69
RPL38YLR325C YRR1Q12172 810 aa4.52□□□□□ -1.69
RPL38YLR325C TUM1Q08686 304 aaKnown RBP4.51□□□□□ -1.69
RPL38YLR325C MAK21Q12176 1025 aaKnown RBP4.51□□□□□ -1.69
RPL38YLR325C MAM3Q12296 706 aa4.5□□□□□ -1.69
RPL38YLR325C YML082WQ04533 649 aaKnown RBP4.49□□□□□ -1.69
RPL38YLR325C ORC6P38826 435 aa4.48□□□□□ -1.69
RPL38YLR325C MVP1P40959 511 aaKnown RBP4.48□□□□□ -1.69
RPL38YLR325C CSC1Q06538 782 aa4.48□□□□□ -1.69
RPL38YLR325C XDJ1P39102 459 aa4.47□□□□□ -1.69
RPL38YLR325C IES2P40154 320 aa4.47□□□□□ -1.69
RPL38YLR325C YPR109WQ06104 294 aa4.47□□□□□ -1.69
RPL38YLR325C YPR015CQ12531 247 aa4.47□□□□□ -1.69
RPL38YLR325C RGR1P19263 1082 aa4.46□□□□□ -1.7
RPL38YLR325C DSF2P38213 736 aa4.46□□□□□ -1.7
RPL38YLR325C GYP1Q08484 637 aa4.46□□□□□ -1.7
RPL38YLR325C DIT2P21595 489 aa4.45□□□□□ -1.7
RPL38YLR325C RAM1P22007 431 aa4.45□□□□□ -1.7
RPL38YLR325C TFB4Q12004 338 aa4.45□□□□□ -1.7
RPL38YLR325C GAP1P19145 602 aaPredicted RBP4.44□□□□□ -1.7
RPL38YLR325C NPL4P33755 580 aa4.44□□□□□ -1.7
RPL38YLR325C NUD1P32336 851 aa4.42□□□□□ -1.7
RPL38YLR325C GCD11P32481 527 aaKnown RBP4.42□□□□□ -1.7
RPL38YLR325C ISM1P48526 1002 aa4.42□□□□□ -1.7
RPL38YLR325C NUP42P49686 430 aaKnown RBP4.42□□□□□ -1.7
RPL38YLR325C BUD20Q08004 166 aaPredicted RBP4.42□□□□□ -1.7
RPL38YLR325C STR2P47164 639 aa4.41□□□□□ -1.7
RPL38YLR325C PSE1P32337 1089 aaKnown RBP4.4□□□□□ -1.71
RPL38YLR325C DPS1P04802 557 aaKnown RBP4.39□□□□□ -1.71
RPL38YLR325C PRT1P06103 763 aaKnown RBP4.39□□□□□ -1.71
RPL38YLR325C TEA1P47988 759 aa4.38□□□□□ -1.71
RPL38YLR325C KEX2P13134 814 aa4.37□□□□□ -1.71
RPL38YLR325C ATF2P53296 535 aa4.37□□□□□ -1.71
RPL38YLR325C ERF2Q06551 359 aa4.37□□□□□ -1.71
RPL38YLR325C RAS1P01119 309 aa4.36□□□□□ -1.71
RPL38YLR325C SEC2P17065 759 aa4.35□□□□□ -1.71
RPL38YLR325C SPT16P32558 1035 aaKnown RBP4.35□□□□□ -1.71
RPL38YLR325C SAS4Q04003 481 aa4.35□□□□□ -1.71
RPL38YLR325C GLC3P32775 704 aa4.34□□□□□ -1.71
RPL38YLR325C RRN7P40992 514 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms