RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W IFH1P39520 1085 aa8.81□□□□□ -1
SMD2YLR275W YEL023CP39992 682 aa8.79□□□□□ -1
SMD2YLR275W FKH1P40466 484 aa8.79□□□□□ -1
SMD2YLR275W YNL035CP53962 389 aaKnown RBP8.79□□□□□ -1
SMD2YLR275W RTG1P32607 177 aa8.78□□□□□ -1
SMD2YLR275W JIP4Q03361 876 aa8.78□□□□□ -1
SMD2YLR275W YPR148CQ06523 435 aa8.76□□□□□ -1.01
SMD2YLR275W PTC4P38089 393 aa8.74□□□□□ -1.01
SMD2YLR275W SOL3P38858 249 aa8.74□□□□□ -1.01
SMD2YLR275W AIR2Q12476 344 aaKnown RBP8.74□□□□□ -1.01
SMD2YLR275W SEC61P32915 480 aa8.73□□□□□ -1.01
SMD2YLR275W DAN4P47179 1161 aa8.73□□□□□ -1.01
SMD2YLR275W NST1P53935 1240 aa8.72□□□□□ -1.01
SMD2YLR275W YGR273CP53329 174 aa8.71□□□□□ -1.02
SMD2YLR275W NCR1Q12200 1170 aa8.7□□□□□ -1.02
SMD2YLR275W VPS70P47161 811 aa8.69□□□□□ -1.02
SMD2YLR275W SAS10Q12136 610 aaPredicted RBP8.69□□□□□ -1.02
SMD2YLR275W TFG1P41895 735 aaPredicted RBP8.67□□□□□ -1.02
SMD2YLR275W AI4P03878 556 aa8.66□□□□□ -1.02
SMD2YLR275W MPH3P0CE00 602 aa8.66□□□□□ -1.02
SMD2YLR275W YJL171CP46992 396 aa8.65□□□□□ -1.02
SMD2YLR275W ILV3P39522 585 aaKnown RBP8.61□□□□□ -1.03
SMD2YLR275W VHR2P40041 505 aa8.6□□□□□ -1.03
SMD2YLR275W YDL129WQ07555 291 aa8.6□□□□□ -1.03
SMD2YLR275W BMT6Q12291 365 aa8.6□□□□□ -1.03
SMD2YLR275W KEX1P09620 729 aa8.59□□□□□ -1.03
SMD2YLR275W UBP14P38237 781 aaKnown RBP8.59□□□□□ -1.03
SMD2YLR275W REF2P42073 533 aaPredicted RBP8.59□□□□□ -1.03
SMD2YLR275W CKB1P43639 278 aa8.59□□□□□ -1.03
SMD2YLR275W PML39Q03760 334 aa8.59□□□□□ -1.03
SMD2YLR275W YLR326WQ06170 240 aaKnown RBP8.58□□□□□ -1.04
SMD2YLR275W SAP30P38429 201 aa8.55□□□□□ -1.04
SMD2YLR275W MID1P41821 548 aa8.53□□□□□ -1.04
SMD2YLR275W RAD54P32863 898 aa8.52□□□□□ -1.05
SMD2YLR275W SLI15P38283 698 aa8.51□□□□□ -1.05
SMD2YLR275W YDR090CQ03193 310 aa8.51□□□□□ -1.05
SMD2YLR275W PCS60P38137 543 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
SMD2YLR275W MAK21Q12176 1025 aaKnown RBP8.49□□□□□ -1.05
SMD2YLR275W PBS2P08018 668 aa8.48□□□□□ -1.05
SMD2YLR275W KIC1P38692 1080 aa8.48□□□□□ -1.05
SMD2YLR275W PEX29Q03370 554 aa8.48□□□□□ -1.05
SMD2YLR275W COX6P00427 148 aa8.46□□□□□ -1.06
SMD2YLR275W MPC54Q08550 464 aa8.43□□□□□ -1.06
SMD2YLR275W SPB4P25808 606 aaPredicted RBP8.42□□□□□ -1.06
SMD2YLR275W DSF2P38213 736 aa8.41□□□□□ -1.06
SMD2YLR275W DPL1Q05567 589 aa8.41□□□□□ -1.06
SMD2YLR275W ARH1P48360 493 aa8.4□□□□□ -1.06
SMD2YLR275W YDR344CQ05510 147 aa8.4□□□□□ -1.06
SMD2YLR275W RPP1BP10622 106 aaKnown RBP8.39□□□□□ -1.07
SMD2YLR275W PRE3P38624 215 aa8.39□□□□□ -1.07
SMD2YLR275W CDC73Q06697 393 aa8.39□□□□□ -1.07
SMD2YLR275W ELP4Q02884 456 aaKnown RBP8.38□□□□□ -1.07
SMD2YLR275W MAM3Q12296 706 aa8.38□□□□□ -1.07
SMD2YLR275W CHL1P22516 861 aaPredicted RBP8.37□□□□□ -1.07
SMD2YLR275W HAP5Q02516 242 aa8.36□□□□□ -1.07
SMD2YLR275W NMA111P53920 997 aa8.35□□□□□ -1.07
SMD2YLR275W ORC6P38826 435 aa8.33□□□□□ -1.08
SMD2YLR275W IES2P40154 320 aa8.32□□□□□ -1.08
SMD2YLR275W ISU2Q12056 156 aa8.32□□□□□ -1.08
SMD2YLR275W SPT23P35210 1082 aa8.3□□□□□ -1.08
SMD2YLR275W GAP1P19145 602 aaPredicted RBP8.29□□□□□ -1.08
SMD2YLR275W BNI4P53858 892 aa8.29□□□□□ -1.08
SMD2YLR275W CSC1Q06538 782 aa8.29□□□□□ -1.08
SMD2YLR275W PEX21P50091 288 aa8.27□□□□□ -1.09
SMD2YLR275W NUP42P49686 430 aaKnown RBP8.26□□□□□ -1.09
SMD2YLR275W TFB4Q12004 338 aa8.26□□□□□ -1.09
SMD2YLR275W PSE1P32337 1089 aaKnown RBP8.24□□□□□ -1.09
SMD2YLR275W PTC2P39966 464 aaKnown RBP8.24□□□□□ -1.09
SMD2YLR275W MVP1P40959 511 aaKnown RBP8.23□□□□□ -1.09
SMD2YLR275W RGR1P19263 1082 aa8.22□□□□□ -1.09
SMD2YLR275W DIT2P21595 489 aa8.22□□□□□ -1.09
SMD2YLR275W LEU3P08638 886 aa8.2□□□□□ -1.1
SMD2YLR275W BCK2P33306 851 aa8.2□□□□□ -1.1
SMD2YLR275W YML082WQ04533 649 aaKnown RBP8.2□□□□□ -1.1
SMD2YLR275W TUM1Q08686 304 aaKnown RBP8.2□□□□□ -1.1
SMD2YLR275W YRR1Q12172 810 aa8.2□□□□□ -1.1
SMD2YLR275W PDR1P12383 1068 aa8.18□□□□□ -1.1
SMD2YLR275W VRP1P37370 817 aa8.17□□□□□ -1.1
SMD2YLR275W YPR109WQ06104 294 aa8.17□□□□□ -1.1
SMD2YLR275W RAM1P22007 431 aa8.16□□□□□ -1.1
SMD2YLR275W YNR021WP53723 404 aaKnown RBP8.15□□□□□ -1.1
SMD2YLR275W YPR015CQ12531 247 aa8.14□□□□□ -1.11
SMD2YLR275W CLB5P30283 435 aa8.13□□□□□ -1.11
SMD2YLR275W NUD1P32336 851 aa8.11□□□□□ -1.11
SMD2YLR275W GLC3P32775 704 aa8.1□□□□□ -1.11
SMD2YLR275W TEA1P47988 759 aa8.09□□□□□ -1.11
SMD2YLR275W XDJ1P39102 459 aa8.08□□□□□ -1.12
SMD2YLR275W ATF2P53296 535 aa8.08□□□□□ -1.12
SMD2YLR275W NPL4P33755 580 aa8.07□□□□□ -1.12
SMD2YLR275W STR2P47164 639 aa8.07□□□□□ -1.12
SMD2YLR275W ISM1P48526 1002 aa8.06□□□□□ -1.12
SMD2YLR275W BUD20Q08004 166 aaPredicted RBP8.05□□□□□ -1.12
SMD2YLR275W AIM7Q12156 149 aa8.04□□□□□ -1.12
SMD2YLR275W RPN1P38764 993 aaKnown RBP8.03□□□□□ -1.12
SMD2YLR275W GYP1Q08484 637 aa8.02□□□□□ -1.13
SMD2YLR275W PRT1P06103 763 aaKnown RBP8.01□□□□□ -1.13
SMD2YLR275W NIS1P53939 407 aa8.01□□□□□ -1.13
SMD2YLR275W GCD11P32481 527 aaKnown RBP7.99□□□□□ -1.13
SMD2YLR275W SAS4Q04003 481 aa7.99□□□□□ -1.13
SMD2YLR275W KEX2P13134 814 aa7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms