RNA–Protein interactions for RNA: YLR119W

SRN2, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene SRN2, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRN2YLR119W RTG1P32607 177 aa13.31□□□□□ -0.28
SRN2YLR119W AIR2Q12476 344 aaKnown RBP13.31□□□□□ -0.28
SRN2YLR119W YNL035CP53962 389 aaKnown RBP13.3□□□□□ -0.28
SRN2YLR119W YEL023CP39992 682 aa13.28□□□□□ -0.28
SRN2YLR119W JIP4Q03361 876 aa13.26□□□□□ -0.29
SRN2YLR119W SEC61P32915 480 aa13.21□□□□□ -0.29
SRN2YLR119W DAN4P47179 1161 aa13.21□□□□□ -0.29
SRN2YLR119W RQC2Q12532 1038 aaKnown RBP13.2□□□□□ -0.3
SRN2YLR119W PTC4P38089 393 aa13.19□□□□□ -0.3
SRN2YLR119W SOL3P38858 249 aa13.17□□□□□ -0.3
SRN2YLR119W NCR1Q12200 1170 aa13.17□□□□□ -0.3
SRN2YLR119W NST1P53935 1240 aa13.16□□□□□ -0.3
SRN2YLR119W YJL171CP46992 396 aa13.15□□□□□ -0.3
SRN2YLR119W IFH1P39520 1085 aa13.14□□□□□ -0.31
SRN2YLR119W YGR273CP53329 174 aa13.11□□□□□ -0.31
SRN2YLR119W TFG1P41895 735 aaPredicted RBP13.1□□□□□ -0.31
SRN2YLR119W YPR148CQ06523 435 aa13.09□□□□□ -0.31
SRN2YLR119W BMT6Q12291 365 aa13.08□□□□□ -0.32
SRN2YLR119W AI4P03878 556 aa13.05□□□□□ -0.32
SRN2YLR119W MPH3P0CE00 602 aa13.04□□□□□ -0.32
SRN2YLR119W ILV3P39522 585 aaKnown RBP13.02□□□□□ -0.33
SRN2YLR119W YDL129WQ07555 291 aa13.01□□□□□ -0.33
SRN2YLR119W SAP30P38429 201 aa12.98□□□□□ -0.33
SRN2YLR119W VPS70P47161 811 aa12.98□□□□□ -0.33
SRN2YLR119W PML39Q03760 334 aa12.98□□□□□ -0.33
SRN2YLR119W VHR2P40041 505 aa12.93□□□□□ -0.34
SRN2YLR119W KEX1P09620 729 aa12.92□□□□□ -0.34
SRN2YLR119W YLR326WQ06170 240 aaKnown RBP12.91□□□□□ -0.34
SRN2YLR119W SAS10Q12136 610 aaPredicted RBP12.91□□□□□ -0.34
SRN2YLR119W UBP14P38237 781 aaKnown RBP12.88□□□□□ -0.35
SRN2YLR119W MID1P41821 548 aa12.88□□□□□ -0.35
SRN2YLR119W REF2P42073 533 aaPredicted RBP12.85□□□□□ -0.35
SRN2YLR119W SLI15P38283 698 aa12.82□□□□□ -0.36
SRN2YLR119W PEX29Q03370 554 aa12.81□□□□□ -0.36
SRN2YLR119W RAD54P32863 898 aa12.79□□□□□ -0.36
SRN2YLR119W YDR090CQ03193 310 aa12.78□□□□□ -0.36
SRN2YLR119W PCS60P38137 543 aaKnown RBP RIP-Chip data12.77□□□□□ -0.37not detected
SRN2YLR119W CKB1P43639 278 aa12.77□□□□□ -0.37
SRN2YLR119W YDR344CQ05510 147 aa12.77□□□□□ -0.37
SRN2YLR119W PRE3P38624 215 aa12.73□□□□□ -0.37
SRN2YLR119W MPC54Q08550 464 aa12.73□□□□□ -0.37
SRN2YLR119W KIC1P38692 1080 aa12.71□□□□□ -0.37
SRN2YLR119W ARH1P48360 493 aa12.7□□□□□ -0.38
SRN2YLR119W CHL1P22516 861 aaPredicted RBP12.69□□□□□ -0.38
SRN2YLR119W ELP4Q02884 456 aaKnown RBP12.69□□□□□ -0.38
SRN2YLR119W MAK21Q12176 1025 aaKnown RBP12.68□□□□□ -0.38
SRN2YLR119W DPL1Q05567 589 aa12.66□□□□□ -0.38
SRN2YLR119W PBS2P08018 668 aa12.65□□□□□ -0.38
SRN2YLR119W COX6P00427 148 aa12.64□□□□□ -0.39
SRN2YLR119W CDC73Q06697 393 aa12.64□□□□□ -0.39
SRN2YLR119W HAP5Q02516 242 aa12.62□□□□□ -0.39
SRN2YLR119W NMA111P53920 997 aa12.59□□□□□ -0.39
SRN2YLR119W RPP1BP10622 106 aaKnown RBP12.56□□□□□ -0.4
SRN2YLR119W SPT23P35210 1082 aa12.53□□□□□ -0.4
SRN2YLR119W DSF2P38213 736 aa12.53□□□□□ -0.4
SRN2YLR119W ORC6P38826 435 aa12.52□□□□□ -0.41
SRN2YLR119W BNI4P53858 892 aa12.52□□□□□ -0.41
SRN2YLR119W ISU2Q12056 156 aa12.52□□□□□ -0.41
SRN2YLR119W SPB4P25808 606 aaPredicted RBP12.51□□□□□ -0.41
SRN2YLR119W MAM3Q12296 706 aa12.51□□□□□ -0.41
SRN2YLR119W GAP1P19145 602 aaPredicted RBP12.46□□□□□ -0.41
SRN2YLR119W BCK2P33306 851 aa12.46□□□□□ -0.41
SRN2YLR119W PTC2P39966 464 aaKnown RBP12.44□□□□□ -0.42
SRN2YLR119W IES2P40154 320 aa12.44□□□□□ -0.42
SRN2YLR119W CSC1Q06538 782 aa12.43□□□□□ -0.42
SRN2YLR119W PEX21P50091 288 aa12.41□□□□□ -0.42
SRN2YLR119W VRP1P37370 817 aa12.39□□□□□ -0.43
SRN2YLR119W TFB4Q12004 338 aa12.39□□□□□ -0.43
SRN2YLR119W YML082WQ04533 649 aaKnown RBP12.37□□□□□ -0.43
SRN2YLR119W PDR1P12383 1068 aa12.36□□□□□ -0.43
SRN2YLR119W YRR1Q12172 810 aa12.35□□□□□ -0.43
SRN2YLR119W MVP1P40959 511 aaKnown RBP12.34□□□□□ -0.43
SRN2YLR119W RAM1P22007 431 aa12.33□□□□□ -0.44
SRN2YLR119W NUP42P49686 430 aaKnown RBP12.33□□□□□ -0.44
SRN2YLR119W TUM1Q08686 304 aaKnown RBP12.33□□□□□ -0.44
SRN2YLR119W YPR015CQ12531 247 aa12.32□□□□□ -0.44
SRN2YLR119W PSE1P32337 1089 aaKnown RBP12.31□□□□□ -0.44
SRN2YLR119W RGR1P19263 1082 aa12.3□□□□□ -0.44
SRN2YLR119W DIT2P21595 489 aa12.25□□□□□ -0.45
SRN2YLR119W XDJ1P39102 459 aa12.23□□□□□ -0.45
SRN2YLR119W YPR109WQ06104 294 aa12.23□□□□□ -0.45
SRN2YLR119W NUD1P32336 851 aa12.21□□□□□ -0.45
SRN2YLR119W STR2P47164 639 aa12.17□□□□□ -0.46
SRN2YLR119W CLB5P30283 435 aa12.15□□□□□ -0.46
SRN2YLR119W ISM1P48526 1002 aa12.14□□□□□ -0.47
SRN2YLR119W NPL4P33755 580 aa12.12□□□□□ -0.47
SRN2YLR119W YNR021WP53723 404 aaKnown RBP12.12□□□□□ -0.47
SRN2YLR119W GYP1Q08484 637 aa12.12□□□□□ -0.47
SRN2YLR119W LEU3P08638 886 aa12.11□□□□□ -0.47
SRN2YLR119W BUD20Q08004 166 aaPredicted RBP12.11□□□□□ -0.47
SRN2YLR119W TEA1P47988 759 aa12.09□□□□□ -0.47
SRN2YLR119W GLC3P32775 704 aa12.08□□□□□ -0.48
SRN2YLR119W PRT1P06103 763 aaKnown RBP12.05□□□□□ -0.48
SRN2YLR119W SAS4Q04003 481 aa12.04□□□□□ -0.48
SRN2YLR119W TY1A-DR4O74302 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-HP0C2I4 478 aaKnown RBP12.03□□□□□ -0.48
SRN2YLR119W TY1A-AP0CX57 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-PR1P0CX58 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-ORP0CX59 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-PR2P0CX60 440 aa12.03□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms