RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W NOP53Q12080 455 aaKnown RBP4.52□□□□□ -1.69
CFT2YLR115W GUT1P32190 709 aa4.51□□□□□ -1.69
CFT2YLR115W SEC61P32915 480 aa4.5□□□□□ -1.69
CFT2YLR115W SOL3P38858 249 aa4.5□□□□□ -1.69
CFT2YLR115W YEL023CP39992 682 aa4.5□□□□□ -1.69
CFT2YLR115W PTC4P38089 393 aa4.49□□□□□ -1.69
CFT2YLR115W SET1P38827 1080 aaKnown RBP4.49□□□□□ -1.69
CFT2YLR115W ATH1P48016 1211 aa4.49□□□□□ -1.69
CFT2YLR115W JIP4Q03361 876 aa4.49□□□□□ -1.69
CFT2YLR115W NCR1Q12200 1170 aa4.48□□□□□ -1.69
CFT2YLR115W YJL171CP46992 396 aa4.45□□□□□ -1.7
CFT2YLR115W BMT6Q12291 365 aa4.44□□□□□ -1.7
CFT2YLR115W YGR273CP53329 174 aa4.44□□□□□ -1.7
CFT2YLR115W ILV3P39522 585 aaKnown RBP4.43□□□□□ -1.7
CFT2YLR115W AI4P03878 556 aa4.42□□□□□ -1.7
CFT2YLR115W MPH3P0CE00 602 aa4.42□□□□□ -1.7
CFT2YLR115W YDL129WQ07555 291 aa4.42□□□□□ -1.7
CFT2YLR115W YPR148CQ06523 435 aa4.41□□□□□ -1.7
CFT2YLR115W DMA1P38823 416 aa4.4□□□□□ -1.7
CFT2YLR115W PML39Q03760 334 aa4.4□□□□□ -1.7
CFT2YLR115W SAP30P38429 201 aa4.4□□□□□ -1.71
CFT2YLR115W YDR344CQ05510 147 aa4.4□□□□□ -1.71
CFT2YLR115W TFG1P41895 735 aaPredicted RBP4.39□□□□□ -1.71
CFT2YLR115W MID1P41821 548 aa4.38□□□□□ -1.71
CFT2YLR115W UBP14P38237 781 aaKnown RBP4.38□□□□□ -1.71
CFT2YLR115W KEX1P09620 729 aa4.37□□□□□ -1.71
CFT2YLR115W IFH1P39520 1085 aa4.37□□□□□ -1.71
CFT2YLR115W YLR326WQ06170 240 aaKnown RBP4.37□□□□□ -1.71
CFT2YLR115W SLI15P38283 698 aa4.35□□□□□ -1.71
CFT2YLR115W VHR2P40041 505 aa4.34□□□□□ -1.72
CFT2YLR115W YDR090CQ03193 310 aa4.34□□□□□ -1.72
CFT2YLR115W SAS10Q12136 610 aaPredicted RBP4.34□□□□□ -1.72
CFT2YLR115W PRE3P38624 215 aa4.33□□□□□ -1.72
CFT2YLR115W PCS60P38137 543 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
CFT2YLR115W CHL1P22516 861 aaPredicted RBP4.32□□□□□ -1.72
CFT2YLR115W VPS70P47161 811 aa4.32□□□□□ -1.72
CFT2YLR115W ARH1P48360 493 aa4.32□□□□□ -1.72
CFT2YLR115W MPC54Q08550 464 aa4.32□□□□□ -1.72
CFT2YLR115W PEX29Q03370 554 aa4.31□□□□□ -1.72
CFT2YLR115W REF2P42073 533 aaPredicted RBP4.3□□□□□ -1.72
CFT2YLR115W CDC73Q06697 393 aa4.28□□□□□ -1.72
CFT2YLR115W RAD54P32863 898 aa4.27□□□□□ -1.73
CFT2YLR115W HAP5Q02516 242 aa4.27□□□□□ -1.73
CFT2YLR115W DPL1Q05567 589 aa4.27□□□□□ -1.73
CFT2YLR115W NMA111P53920 997 aa4.27□□□□□ -1.73
CFT2YLR115W ELP4Q02884 456 aaKnown RBP4.27□□□□□ -1.73
CFT2YLR115W COX6P00427 148 aa4.26□□□□□ -1.73
CFT2YLR115W GAP1P19145 602 aaPredicted RBP4.25□□□□□ -1.73
CFT2YLR115W BNI4P53858 892 aa4.25□□□□□ -1.73
CFT2YLR115W CKB1P43639 278 aa4.24□□□□□ -1.73
CFT2YLR115W BCK2P33306 851 aa4.24□□□□□ -1.73
CFT2YLR115W SPT23P35210 1082 aa4.24□□□□□ -1.73
CFT2YLR115W MAK21Q12176 1025 aaKnown RBP4.24□□□□□ -1.73
CFT2YLR115W RAM1P22007 431 aa4.23□□□□□ -1.73
CFT2YLR115W ISU2Q12056 156 aa4.23□□□□□ -1.73
CFT2YLR115W PBS2P08018 668 aa4.22□□□□□ -1.73
CFT2YLR115W ORC6P38826 435 aa4.22□□□□□ -1.73
CFT2YLR115W YML082WQ04533 649 aaKnown RBP4.22□□□□□ -1.73
CFT2YLR115W VRP1P37370 817 aa4.21□□□□□ -1.73
CFT2YLR115W KIC1P38692 1080 aa4.21□□□□□ -1.73
CFT2YLR115W YPR015CQ12531 247 aa4.21□□□□□ -1.73
CFT2YLR115W DSF2P38213 736 aa4.2□□□□□ -1.74
CFT2YLR115W PTC2P39966 464 aaKnown RBP4.2□□□□□ -1.74
CFT2YLR115W PDR1P12383 1068 aa4.19□□□□□ -1.74
CFT2YLR115W XDJ1P39102 459 aa4.18□□□□□ -1.74
CFT2YLR115W MVP1P40959 511 aaKnown RBP4.18□□□□□ -1.74
CFT2YLR115W CSC1Q06538 782 aa4.17□□□□□ -1.74
CFT2YLR115W RQC2Q12532 1038 aaKnown RBP4.17□□□□□ -1.74
CFT2YLR115W RPP1BP10622 106 aaKnown RBP4.16□□□□□ -1.74
CFT2YLR115W RGR1P19263 1082 aa4.16□□□□□ -1.74
CFT2YLR115W NUP42P49686 430 aaKnown RBP4.16□□□□□ -1.74
CFT2YLR115W TFB4Q12004 338 aa4.16□□□□□ -1.74
CFT2YLR115W MAM3Q12296 706 aa4.15□□□□□ -1.74
CFT2YLR115W TUM1Q08686 304 aaKnown RBP4.15□□□□□ -1.75
CFT2YLR115W YRR1Q12172 810 aa4.15□□□□□ -1.75
CFT2YLR115W IES2P40154 320 aa4.14□□□□□ -1.75
CFT2YLR115W PSE1P32337 1089 aaKnown RBP4.13□□□□□ -1.75
CFT2YLR115W STR2P47164 639 aa4.13□□□□□ -1.75
CFT2YLR115W SPB4P25808 606 aaPredicted RBP4.12□□□□□ -1.75
CFT2YLR115W PEX21P50091 288 aa4.12□□□□□ -1.75
CFT2YLR115W DIT2P21595 489 aa4.12□□□□□ -1.75
CFT2YLR115W BUD20Q08004 166 aaPredicted RBP4.12□□□□□ -1.75
CFT2YLR115W YPR109WQ06104 294 aa4.11□□□□□ -1.75
CFT2YLR115W ISM1P48526 1002 aa4.11□□□□□ -1.75
CFT2YLR115W SDH2P21801 266 aa4.1□□□□□ -1.75
CFT2YLR115W NUD1P32336 851 aa4.1□□□□□ -1.75
CFT2YLR115W SEC2P17065 759 aa4.1□□□□□ -1.75
CFT2YLR115W TY1A-DR4O74302 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-HP0C2I4 478 aaKnown RBP4.09□□□□□ -1.75
CFT2YLR115W TY1A-AP0CX57 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-PR1P0CX58 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-ORP0CX59 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-PR2P0CX60 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-DR5P0CX65 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-ER2P0CX66 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-GR3P0CX67 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-LR1P0CX68 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-MR2P0CX69 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-JR2P47099 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-DR1Q03856 440 aa4.09□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms