RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeastyeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH3YKL141W YDL129WQ07555 291 aa8.97□□□□□ -0.97
SDH3YKL141W YEL023CP39992 682 aa8.96□□□□□ -0.98
SDH3YKL141W GRE2Q12068 342 aaKnown RBP8.9□□□□□ -0.98
SDH3YKL141W CHL1P22516 861 aaPredicted RBP8.89□□□□□ -0.99
SDH3YKL141W MAK11P20484 414 aaKnown RBP8.88□□□□□ -0.99
SDH3YKL141W RAM2P29703 316 aa8.86□□□□□ -0.99
SDH3YKL141W MIF2P35201 549 aa8.86□□□□□ -0.99
SDH3YKL141W PRE3P38624 215 aa8.86□□□□□ -0.99
SDH3YKL141W BCK2P33306 851 aa8.85□□□□□ -0.99
SDH3YKL141W ATH1P48016 1211 aa8.82□□□□□ -1
SDH3YKL141W GUT1P32190 709 aa8.81□□□□□ -1
SDH3YKL141W PTC3P34221 468 aaKnown RBP8.81□□□□□ -1
SDH3YKL141W EDS1P38073 919 aa8.81□□□□□ -1
SDH3YKL141W PML39Q03760 334 aa8.78□□□□□ -1
SDH3YKL141W COQ8P27697 501 aa8.75□□□□□ -1.01
SDH3YKL141W NST1P53935 1240 aa8.72□□□□□ -1.01
SDH3YKL141W YDR344CQ05510 147 aa8.71□□□□□ -1.02
SDH3YKL141W ELP4Q02884 456 aaKnown RBP8.7□□□□□ -1.02
SDH3YKL141W SOL3P38858 249 aa8.68□□□□□ -1.02
SDH3YKL141W VRP1P37370 817 aa8.67□□□□□ -1.02
SDH3YKL141W ARH1P48360 493 aa8.66□□□□□ -1.02
SDH3YKL141W AI4P03878 556 aa8.65□□□□□ -1.02
SDH3YKL141W MPH3P0CE00 602 aa8.65□□□□□ -1.02
SDH3YKL141W MID1P41821 548 aa8.65□□□□□ -1.02
SDH3YKL141W XDJ1P39102 459 aa8.64□□□□□ -1.03
SDH3YKL141W NOP53Q12080 455 aaKnown RBP8.64□□□□□ -1.03
SDH3YKL141W PEX29Q03370 554 aa8.59□□□□□ -1.03
SDH3YKL141W ILV3P39522 585 aaKnown RBP8.57□□□□□ -1.04
SDH3YKL141W SPT23P35210 1082 aa8.56□□□□□ -1.04
SDH3YKL141W YGR273CP53329 174 aa8.56□□□□□ -1.04
SDH3YKL141W HAP5Q02516 242 aa8.53□□□□□ -1.04
SDH3YKL141W BNI4P53858 892 aa8.48□□□□□ -1.05
SDH3YKL141W MPC54Q08550 464 aa8.48□□□□□ -1.05
SDH3YKL141W DPS1P04802 557 aaKnown RBP8.46□□□□□ -1.06
SDH3YKL141W PTC2P39966 464 aaKnown RBP8.44□□□□□ -1.06
SDH3YKL141W YML082WQ04533 649 aaKnown RBP8.44□□□□□ -1.06
SDH3YKL141W SLI15P38283 698 aa8.43□□□□□ -1.06
SDH3YKL141W NMA111P53920 997 aa8.42□□□□□ -1.06
SDH3YKL141W DPL1Q05567 589 aa8.39□□□□□ -1.07
SDH3YKL141W KEX1P09620 729 aa8.37□□□□□ -1.07
SDH3YKL141W SET1P38827 1080 aaKnown RBP8.35□□□□□ -1.07
SDH3YKL141W ISU2Q12056 156 aa8.31□□□□□ -1.08
SDH3YKL141W YLR326WQ06170 240 aaKnown RBP8.28□□□□□ -1.08
SDH3YKL141W UBP14P38237 781 aaKnown RBP8.27□□□□□ -1.09
SDH3YKL141W CDC73Q06697 393 aa8.27□□□□□ -1.09
SDH3YKL141W YPR015CQ12531 247 aa8.27□□□□□ -1.09
SDH3YKL141W RAM1P22007 431 aa8.26□□□□□ -1.09
SDH3YKL141W VHR2P40041 505 aa8.25□□□□□ -1.09
SDH3YKL141W SRC1Q03707 834 aa8.25□□□□□ -1.09
SDH3YKL141W PCS60P38137 543 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
SDH3YKL141W RAD54P32863 898 aa8.2□□□□□ -1.1
SDH3YKL141W RPP1BP10622 106 aaKnown RBP8.18□□□□□ -1.1
SDH3YKL141W GYP1Q08484 637 aa8.18□□□□□ -1.1
SDH3YKL141W RAS1P01119 309 aa8.17□□□□□ -1.1
SDH3YKL141W PDR1P12383 1068 aa8.16□□□□□ -1.1
SDH3YKL141W IFH1P39520 1085 aa8.15□□□□□ -1.1
SDH3YKL141W SAS4Q04003 481 aa8.13□□□□□ -1.11
SDH3YKL141W YDR090CQ03193 310 aa8.12□□□□□ -1.11
SDH3YKL141W AMS1P22855 1083 aa8.11□□□□□ -1.11
SDH3YKL141W KIC1P38692 1080 aa8.09□□□□□ -1.11
SDH3YKL141W SDH2P21801 266 aa8.06□□□□□ -1.12
SDH3YKL141W PEX21P50091 288 aa8.05□□□□□ -1.12
SDH3YKL141W YPR148CQ06523 435 aa8.05□□□□□ -1.12
SDH3YKL141W GAP1P19145 602 aaPredicted RBP8.04□□□□□ -1.12
SDH3YKL141W REF2P42073 533 aaPredicted RBP8.04□□□□□ -1.12
SDH3YKL141W YRR1Q12172 810 aa8.04□□□□□ -1.12
SDH3YKL141W TRK1P12685 1235 aa8.02□□□□□ -1.13
SDH3YKL141W CSC1Q06538 782 aa8.02□□□□□ -1.13
SDH3YKL141W TFB4Q12004 338 aa8.02□□□□□ -1.13
SDH3YKL141W BUD20Q08004 166 aaPredicted RBP8.01□□□□□ -1.13
SDH3YKL141W YEL077CQ3E7X8 1277 aa8.01□□□□□ -1.13
SDH3YKL141W PRT1P06103 763 aaKnown RBP8□□□□□ -1.13
SDH3YKL141W MRF1P30775 413 aaPredicted RBP8□□□□□ -1.13
SDH3YKL141W STR2P47164 639 aa7.98□□□□□ -1.13
SDH3YKL141W TUM1Q08686 304 aaKnown RBP7.96□□□□□ -1.14
SDH3YKL141W ORC6P38826 435 aa7.95□□□□□ -1.14
SDH3YKL141W ISM1P48526 1002 aa7.95□□□□□ -1.14
SDH3YKL141W NUD1P32336 851 aa7.94□□□□□ -1.14
SDH3YKL141W RGA1P39083 1007 aa7.93□□□□□ -1.14
SDH3YKL141W VPS70P47161 811 aa7.93□□□□□ -1.14
SDH3YKL141W MAK21Q12176 1025 aaKnown RBP7.93□□□□□ -1.14
SDH3YKL141W NPL4P33755 580 aa7.92□□□□□ -1.14
SDH3YKL141W COX6P00427 148 aa7.91□□□□□ -1.14
SDH3YKL141W ERG12P07277 443 aa7.9□□□□□ -1.14
SDH3YKL141W RGA2Q06407 1009 aa7.89□□□□□ -1.15
SDH3YKL141W MVP1P40959 511 aaKnown RBP7.87□□□□□ -1.15
SDH3YKL141W GCD11P32481 527 aaKnown RBP7.86□□□□□ -1.15
SDH3YKL141W TY1A-DR4O74302 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-HP0C2I4 478 aaKnown RBP7.85□□□□□ -1.15
SDH3YKL141W TY1A-AP0CX57 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-PR1P0CX58 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-ORP0CX59 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-PR2P0CX60 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-DR5P0CX65 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-ER2P0CX66 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-GR3P0CX67 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-LR1P0CX68 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-MR2P0CX69 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-JR2P47099 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-DR1Q03856 440 aa7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms