RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W CKB1P43639 278 aa7.47□□□□□ -1.21
MSN4YKL062W TRP5P00931 707 aaKnown RBP7.47□□□□□ -1.21
MSN4YKL062W IOC2Q12072 812 aa7.45□□□□□ -1.22
MSN4YKL062W SOL3P38858 249 aa7.43□□□□□ -1.22
MSN4YKL062W TAF7Q05021 590 aa7.43□□□□□ -1.22
MSN4YKL062W YEL023CP39992 682 aa7.43□□□□□ -1.22
MSN4YKL062W YGR273CP53329 174 aa7.43□□□□□ -1.22
MSN4YKL062W REF2P42073 533 aaPredicted RBP7.42□□□□□ -1.22
MSN4YKL062W LDB19Q12502 818 aa7.41□□□□□ -1.22
MSN4YKL062W PTC4P38089 393 aa7.4□□□□□ -1.23
MSN4YKL062W SPB4P25808 606 aaPredicted RBP7.39□□□□□ -1.23
MSN4YKL062W NST1P53935 1240 aa7.39□□□□□ -1.23
MSN4YKL062W JIP4Q03361 876 aa7.39□□□□□ -1.23
MSN4YKL062W UBP14P38237 781 aaKnown RBP7.37□□□□□ -1.23
MSN4YKL062W VHR2P40041 505 aa7.37□□□□□ -1.23
MSN4YKL062W YNL035CP53962 389 aaKnown RBP7.37□□□□□ -1.23
MSN4YKL062W PBS2P08018 668 aa7.36□□□□□ -1.23
MSN4YKL062W MPH3P0CE00 602 aa7.35□□□□□ -1.23
MSN4YKL062W SIS1P25294 352 aaKnown RBP7.35□□□□□ -1.23
MSN4YKL062W RTG1P32607 177 aa7.35□□□□□ -1.23
MSN4YKL062W DAN4P47179 1161 aa7.35□□□□□ -1.23
MSN4YKL062W AI4P03878 556 aa7.34□□□□□ -1.23
MSN4YKL062W YLR326WQ06170 240 aaKnown RBP7.34□□□□□ -1.23
MSN4YKL062W KEX1P09620 729 aa7.33□□□□□ -1.24
MSN4YKL062W SEC61P32915 480 aa7.32□□□□□ -1.24
MSN4YKL062W COX6P00427 148 aa7.32□□□□□ -1.24
MSN4YKL062W MAK21Q12176 1025 aaKnown RBP7.32□□□□□ -1.24
MSN4YKL062W DSF2P38213 736 aa7.31□□□□□ -1.24
MSN4YKL062W YDR090CQ03193 310 aa7.31□□□□□ -1.24
MSN4YKL062W ILV3P39522 585 aaKnown RBP7.3□□□□□ -1.24
MSN4YKL062W NCR1Q12200 1170 aa7.3□□□□□ -1.24
MSN4YKL062W FKH1P40466 484 aa7.29□□□□□ -1.24
MSN4YKL062W RAD54P32863 898 aa7.28□□□□□ -1.24
MSN4YKL062W PCS60P38137 543 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
MSN4YKL062W KIC1P38692 1080 aa7.28□□□□□ -1.24
MSN4YKL062W TFG1P41895 735 aaPredicted RBP7.28□□□□□ -1.24
MSN4YKL062W MAM3Q12296 706 aa7.27□□□□□ -1.25
MSN4YKL062W LEU3P08638 886 aa7.26□□□□□ -1.25
MSN4YKL062W PML39Q03760 334 aa7.26□□□□□ -1.25
MSN4YKL062W AIR2Q12476 344 aaKnown RBP7.26□□□□□ -1.25
MSN4YKL062W SLI15P38283 698 aa7.24□□□□□ -1.25
MSN4YKL062W MID1P41821 548 aa7.22□□□□□ -1.25
MSN4YKL062W YDL129WQ07555 291 aa7.21□□□□□ -1.25
MSN4YKL062W IES2P40154 320 aa7.2□□□□□ -1.26
MSN4YKL062W YJL171CP46992 396 aa7.19□□□□□ -1.26
MSN4YKL062W SAP30P38429 201 aa7.17□□□□□ -1.26
MSN4YKL062W NUP42P49686 430 aaKnown RBP7.17□□□□□ -1.26
MSN4YKL062W DIT2P21595 489 aa7.16□□□□□ -1.26
MSN4YKL062W RPP1BP10622 106 aaKnown RBP7.15□□□□□ -1.26
MSN4YKL062W PEX29Q03370 554 aa7.15□□□□□ -1.26
MSN4YKL062W BMT6Q12291 365 aa7.15□□□□□ -1.26
MSN4YKL062W CDC73Q06697 393 aa7.15□□□□□ -1.27
MSN4YKL062W ORC6P38826 435 aa7.14□□□□□ -1.27
MSN4YKL062W MPC54Q08550 464 aa7.14□□□□□ -1.27
MSN4YKL062W DPL1Q05567 589 aa7.13□□□□□ -1.27
MSN4YKL062W YNR021WP53723 404 aaKnown RBP7.12□□□□□ -1.27
MSN4YKL062W RPN1P38764 993 aaKnown RBP7.11□□□□□ -1.27
MSN4YKL062W PSE1P32337 1089 aaKnown RBP7.1□□□□□ -1.27
MSN4YKL062W LEO1P38439 464 aa7.1□□□□□ -1.27
MSN4YKL062W NMA111P53920 997 aa7.09□□□□□ -1.27
MSN4YKL062W CSC1Q06538 782 aa7.09□□□□□ -1.27
MSN4YKL062W GAP1P19145 602 aaPredicted RBP7.09□□□□□ -1.28
MSN4YKL062W MVP1P40959 511 aaKnown RBP7.08□□□□□ -1.28
MSN4YKL062W ARH1P48360 493 aa7.08□□□□□ -1.28
MSN4YKL062W RGR1P19263 1082 aa7.07□□□□□ -1.28
MSN4YKL062W PEX21P50091 288 aa7.07□□□□□ -1.28
MSN4YKL062W ISU2Q12056 156 aa7.07□□□□□ -1.28
MSN4YKL062W GLC3P32775 704 aa7.07□□□□□ -1.28
MSN4YKL062W YDR344CQ05510 147 aa7.07□□□□□ -1.28
MSN4YKL062W HAP5Q02516 242 aa7.06□□□□□ -1.28
MSN4YKL062W ATF2P53296 535 aa7.05□□□□□ -1.28
MSN4YKL062W ELP4Q02884 456 aaKnown RBP7.05□□□□□ -1.28
MSN4YKL062W TFB4Q12004 338 aa7.05□□□□□ -1.28
MSN4YKL062W PRE3P38624 215 aa7.02□□□□□ -1.28
MSN4YKL062W TUM1Q08686 304 aaKnown RBP7.02□□□□□ -1.28
MSN4YKL062W AIM7Q12156 149 aa7.02□□□□□ -1.28
MSN4YKL062W YPR109WQ06104 294 aa7.02□□□□□ -1.29
MSN4YKL062W CHL1P22516 861 aaPredicted RBP7□□□□□ -1.29
MSN4YKL062W YRR1Q12172 810 aa7□□□□□ -1.29
MSN4YKL062W TEA1P47988 759 aa7□□□□□ -1.29
MSN4YKL062W SPT23P35210 1082 aa6.99□□□□□ -1.29
MSN4YKL062W CLB5P30283 435 aa6.98□□□□□ -1.29
MSN4YKL062W BNI4P53858 892 aa6.98□□□□□ -1.29
MSN4YKL062W KIN1P13185 1064 aa6.98□□□□□ -1.29
MSN4YKL062W PDR1P12383 1068 aa6.96□□□□□ -1.3
MSN4YKL062W PTC2P39966 464 aaKnown RBP6.94□□□□□ -1.3
MSN4YKL062W YML082WQ04533 649 aaKnown RBP6.92□□□□□ -1.3
MSN4YKL062W RAM1P22007 431 aa6.91□□□□□ -1.3
MSN4YKL062W NUD1P32336 851 aa6.91□□□□□ -1.3
MSN4YKL062W NIS1P53939 407 aa6.91□□□□□ -1.3
MSN4YKL062W NPL4P33755 580 aa6.89□□□□□ -1.31
MSN4YKL062W FPK1P53739 893 aa6.87□□□□□ -1.31
MSN4YKL062W YMR196WQ04336 1088 aa6.87□□□□□ -1.31
MSN4YKL062W ISM1P48526 1002 aa6.87□□□□□ -1.31
MSN4YKL062W YPR015CQ12531 247 aa6.87□□□□□ -1.31
MSN4YKL062W SIT4P20604 311 aa6.86□□□□□ -1.31
MSN4YKL062W STR2P47164 639 aa6.86□□□□□ -1.31
MSN4YKL062W GUA1P38625 525 aaKnown RBP6.85□□□□□ -1.31
MSN4YKL062W CSN12P47130 423 aa6.85□□□□□ -1.31
MSN4YKL062W BUD20Q08004 166 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms