RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W YDL129WQ07555 291 aa8.17□□□□□ -1.1
TFA1YKL028W TAF7Q05021 590 aa8.16□□□□□ -1.1
TFA1YKL028W YEL023CP39992 682 aa8.15□□□□□ -1.1
TFA1YKL028W BCK2P33306 851 aa8.11□□□□□ -1.11
TFA1YKL028W CHL1P22516 861 aaPredicted RBP8.1□□□□□ -1.11
TFA1YKL028W PTC4P38089 393 aa8.1□□□□□ -1.11
TFA1YKL028W PRE3P38624 215 aa8.09□□□□□ -1.11
TFA1YKL028W GRE2Q12068 342 aaKnown RBP8.05□□□□□ -1.12
TFA1YKL028W MAK11P20484 414 aaKnown RBP8.02□□□□□ -1.13
TFA1YKL028W MIF2P35201 549 aa8.01□□□□□ -1.13
TFA1YKL028W YDR344CQ05510 147 aa8.01□□□□□ -1.13
TFA1YKL028W RAM2P29703 316 aa8□□□□□ -1.13
TFA1YKL028W EDS1P38073 919 aa8□□□□□ -1.13
TFA1YKL028W PML39Q03760 334 aa7.98□□□□□ -1.13
TFA1YKL028W PTC3P34221 468 aaKnown RBP7.97□□□□□ -1.13
TFA1YKL028W ATH1P48016 1211 aa7.97□□□□□ -1.13
TFA1YKL028W GUT1P32190 709 aa7.95□□□□□ -1.14
TFA1YKL028W NST1P53935 1240 aa7.92□□□□□ -1.14
TFA1YKL028W ELP4Q02884 456 aaKnown RBP7.92□□□□□ -1.14
TFA1YKL028W VRP1P37370 817 aa7.9□□□□□ -1.14
TFA1YKL028W COQ8P27697 501 aa7.89□□□□□ -1.15
TFA1YKL028W XDJ1P39102 459 aa7.88□□□□□ -1.15
TFA1YKL028W MID1P41821 548 aa7.87□□□□□ -1.15
TFA1YKL028W SOL3P38858 249 aa7.86□□□□□ -1.15
TFA1YKL028W ARH1P48360 493 aa7.86□□□□□ -1.15
TFA1YKL028W AI4P03878 556 aa7.83□□□□□ -1.16
TFA1YKL028W ILV3P39522 585 aaKnown RBP7.83□□□□□ -1.16
TFA1YKL028W MPH3P0CE00 602 aa7.82□□□□□ -1.16
TFA1YKL028W PEX29Q03370 554 aa7.82□□□□□ -1.16
TFA1YKL028W DMA1P38823 416 aa7.78□□□□□ -1.16
TFA1YKL028W DPS1P04802 557 aaKnown RBP7.77□□□□□ -1.17
TFA1YKL028W SPT23P35210 1082 aa7.77□□□□□ -1.17
TFA1YKL028W HAP5Q02516 242 aa7.74□□□□□ -1.17
TFA1YKL028W YGR273CP53329 174 aa7.73□□□□□ -1.17
TFA1YKL028W BNI4P53858 892 aa7.71□□□□□ -1.17
TFA1YKL028W MPC54Q08550 464 aa7.7□□□□□ -1.18
TFA1YKL028W NOP53Q12080 455 aaKnown RBP7.7□□□□□ -1.18
TFA1YKL028W PTC2P39966 464 aaKnown RBP7.67□□□□□ -1.18
TFA1YKL028W SLI15P38283 698 aa7.64□□□□□ -1.19
TFA1YKL028W YML082WQ04533 649 aaKnown RBP7.64□□□□□ -1.19
TFA1YKL028W SRC1Q03707 834 aa7.62□□□□□ -1.19
TFA1YKL028W LEO1P38439 464 aa7.61□□□□□ -1.19
TFA1YKL028W NMA111P53920 997 aa7.61□□□□□ -1.19
TFA1YKL028W DPL1Q05567 589 aa7.6□□□□□ -1.19
TFA1YKL028W KEX1P09620 729 aa7.56□□□□□ -1.2
TFA1YKL028W YPR015CQ12531 247 aa7.55□□□□□ -1.2
TFA1YKL028W RAM1P22007 431 aa7.52□□□□□ -1.21
TFA1YKL028W YLR326WQ06170 240 aaKnown RBP7.49□□□□□ -1.21
TFA1YKL028W CDC73Q06697 393 aa7.49□□□□□ -1.21
TFA1YKL028W ISU2Q12056 156 aa7.49□□□□□ -1.21
TFA1YKL028W RAS1P01119 309 aa7.46□□□□□ -1.21
TFA1YKL028W SET1P38827 1080 aaKnown RBP7.46□□□□□ -1.21
TFA1YKL028W VHR2P40041 505 aa7.45□□□□□ -1.22
TFA1YKL028W UBP14P38237 781 aaKnown RBP7.44□□□□□ -1.22
TFA1YKL028W GYP1Q08484 637 aa7.42□□□□□ -1.22
TFA1YKL028W PDR1P12383 1068 aa7.41□□□□□ -1.22
TFA1YKL028W RAD54P32863 898 aa7.4□□□□□ -1.22
TFA1YKL028W PCS60P38137 543 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
TFA1YKL028W AMS1P22855 1083 aa7.39□□□□□ -1.23
TFA1YKL028W SDH2P21801 266 aa7.37□□□□□ -1.23
TFA1YKL028W RPP1BP10622 106 aaKnown RBP7.34□□□□□ -1.23
TFA1YKL028W SAS4Q04003 481 aa7.33□□□□□ -1.24
TFA1YKL028W RGA2Q06407 1009 aa7.33□□□□□ -1.24
TFA1YKL028W TRK1P12685 1235 aa7.32□□□□□ -1.24
TFA1YKL028W RGA1P39083 1007 aa7.32□□□□□ -1.24
TFA1YKL028W YDR090CQ03193 310 aa7.3□□□□□ -1.24
TFA1YKL028W YEL077CQ3E7X8 1277 aa7.28□□□□□ -1.24
TFA1YKL028W KIC1P38692 1080 aa7.26□□□□□ -1.25
TFA1YKL028W IFH1P39520 1085 aa7.26□□□□□ -1.25
TFA1YKL028W YRR1Q12172 810 aa7.26□□□□□ -1.25
TFA1YKL028W GAP1P19145 602 aaPredicted RBP7.24□□□□□ -1.25
TFA1YKL028W STR2P47164 639 aa7.24□□□□□ -1.25
TFA1YKL028W BUD20Q08004 166 aaPredicted RBP7.24□□□□□ -1.25
TFA1YKL028W PEX21P50091 288 aa7.23□□□□□ -1.25
TFA1YKL028W LEU3P08638 886 aa7.22□□□□□ -1.25
TFA1YKL028W MRF1P30775 413 aaPredicted RBP7.22□□□□□ -1.25
TFA1YKL028W PRT1P06103 763 aaKnown RBP7.21□□□□□ -1.25
TFA1YKL028W YPR148CQ06523 435 aa7.21□□□□□ -1.25
TFA1YKL028W TFB4Q12004 338 aa7.21□□□□□ -1.25
TFA1YKL028W NUD1P32336 851 aa7.2□□□□□ -1.26
TFA1YKL028W ISM1P48526 1002 aa7.2□□□□□ -1.26
TFA1YKL028W CSC1Q06538 782 aa7.2□□□□□ -1.26
TFA1YKL028W ORC6P38826 435 aa7.18□□□□□ -1.26
TFA1YKL028W REF2P42073 533 aaPredicted RBP7.18□□□□□ -1.26
TFA1YKL028W TUM1Q08686 304 aaKnown RBP7.18□□□□□ -1.26
TFA1YKL028W TY1A-DR4O74302 440 aa7.14□□□□□ -1.27
TFA1YKL028W ERG12P07277 443 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-HP0C2I4 478 aaKnown RBP7.14□□□□□ -1.27
TFA1YKL028W TY1A-AP0CX57 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-PR1P0CX58 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-ORP0CX59 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-PR2P0CX60 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-DR5P0CX65 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-ER2P0CX66 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-GR3P0CX67 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-LR1P0CX68 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-MR2P0CX69 440 aa7.14□□□□□ -1.27
TFA1YKL028W CST6P40535 587 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-JR2P47099 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-DR1Q03856 440 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms