RNA–Protein interactions for RNA: YJL124C

LSM1, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM1, Length 519 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM1	YJL124C	HTA1	P04911	132 aa	Known RBP	5.24	□□□□□ -1.57
LSM1	YJL124C	HTA2	P04912	132 aa		5.24	□□□□□ -1.57
LSM1	YJL124C	DAN4	P47179	1161 aa		5.24	□□□□□ -1.57
LSM1	YJL124C	GRE2	Q12068	342 aa	Known RBP	5.24	□□□□□ -1.57
LSM1	YJL124C	NCR1	Q12200	1170 aa		5.24	□□□□□ -1.57
LSM1	YJL124C	SEC61	P32915	480 aa		5.23	□□□□□ -1.57
LSM1	YJL124C	BMT6	Q12291	365 aa		5.22	□□□□□ -1.57
LSM1	YJL124C	YEL023C	P39992	682 aa		5.21	□□□□□ -1.58
LSM1	YJL124C	JIP4	Q03361	876 aa		5.21	□□□□□ -1.58
LSM1	YJL124C	GUT1	P32190	709 aa		5.2	□□□□□ -1.58
LSM1	YJL124C	ATH1	P48016	1211 aa		5.2	□□□□□ -1.58
LSM1	YJL124C	PTC4	P38089	393 aa		5.19	□□□□□ -1.58
LSM1	YJL124C	NST1	P53935	1240 aa		5.18	□□□□□ -1.58
LSM1	YJL124C	SOL3	P38858	249 aa		5.17	□□□□□ -1.58
LSM1	YJL124C	NOP53	Q12080	455 aa	Known RBP	5.17	□□□□□ -1.58
LSM1	YJL124C	TFG1	P41895	735 aa	Predicted RBP	5.16	□□□□□ -1.58
LSM1	YJL124C	SAP30	P38429	201 aa		5.14	□□□□□ -1.59
LSM1	YJL124C	YDL129W	Q07555	291 aa		5.14	□□□□□ -1.59
LSM1	YJL124C	LEU3	P08638	886 aa		5.13	□□□□□ -1.59
LSM1	YJL124C	SET1	P38827	1080 aa	Known RBP	5.13	□□□□□ -1.59
LSM1	YJL124C	PML39	Q03760	334 aa		5.11	□□□□□ -1.59
LSM1	YJL124C	AIM44	Q99299	758 aa		5.11	□□□□□ -1.59
LSM1	YJL124C	MPH3	P0CE00	602 aa		5.1	□□□□□ -1.59
LSM1	YJL124C	ILV3	P39522	585 aa	Known RBP	5.1	□□□□□ -1.59
LSM1	YJL124C	YGR273C	P53329	174 aa		5.1	□□□□□ -1.59
LSM1	YJL124C	AI4	P03878	556 aa		5.09	□□□□□ -1.59
LSM1	YJL124C	YDR344C	Q05510	147 aa		5.08	□□□□□ -1.6
LSM1	YJL124C	NAP1	P25293	417 aa	Known RBP	5.07	□□□□□ -1.6
LSM1	YJL124C	MID1	P41821	548 aa		5.07	□□□□□ -1.6
LSM1	YJL124C	PRE3	P38624	215 aa		5.05	□□□□□ -1.6
LSM1	YJL124C	CHL1	P22516	861 aa	Predicted RBP	5.04	□□□□□ -1.6
LSM1	YJL124C	DMA2	P53924	522 aa		5.04	□□□□□ -1.6
LSM1	YJL124C	IFH1	P39520	1085 aa		5.02	□□□□□ -1.61
LSM1	YJL124C	KEX1	P09620	729 aa		5.01	□□□□□ -1.61
LSM1	YJL124C	UBP14	P38237	781 aa	Known RBP	5	□□□□□ -1.61
LSM1	YJL124C	SLI15	P38283	698 aa		5	□□□□□ -1.61
LSM1	YJL124C	ARH1	P48360	493 aa		5	□□□□□ -1.61
LSM1	YJL124C	ELP4	Q02884	456 aa	Known RBP	4.99	□□□□□ -1.61
LSM1	YJL124C	PEX29	Q03370	554 aa		4.99	□□□□□ -1.61
LSM1	YJL124C	YLR326W	Q06170	240 aa	Known RBP	4.99	□□□□□ -1.61
LSM1	YJL124C	URN1	Q06525	465 aa	Known RBP	4.99	□□□□□ -1.61
LSM1	YJL124C	SAS10	Q12136	610 aa	Predicted RBP	4.99	□□□□□ -1.61
LSM1	YJL124C	RLF2	Q12495	606 aa		4.99	□□□□□ -1.61
LSM1	YJL124C	VHR2	P40041	505 aa		4.98	□□□□□ -1.61
LSM1	YJL124C	IOC4	Q04213	475 aa		4.98	□□□□□ -1.61
LSM1	YJL124C	YPR148C	Q06523	435 aa		4.98	□□□□□ -1.61
LSM1	YJL124C	MPC54	Q08550	464 aa		4.98	□□□□□ -1.61
LSM1	YJL124C	BCK2	P33306	851 aa		4.97	□□□□□ -1.61
LSM1	YJL124C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
LSM1	YJL124C	HAP5	Q02516	242 aa		4.95	□□□□□ -1.62
LSM1	YJL124C	SPT23	P35210	1082 aa		4.94	□□□□□ -1.62
LSM1	YJL124C	VPS70	P47161	811 aa		4.94	□□□□□ -1.62
LSM1	YJL124C	NMA111	P53920	997 aa		4.94	□□□□□ -1.62
LSM1	YJL124C	YDR090C	Q03193	310 aa		4.94	□□□□□ -1.62
LSM1	YJL124C	DPL1	Q05567	589 aa		4.94	□□□□□ -1.62
LSM1	YJL124C	RAD54	P32863	898 aa		4.93	□□□□□ -1.62
LSM1	YJL124C	VRP1	P37370	817 aa		4.93	□□□□□ -1.62
LSM1	YJL124C	RPN1	P38764	993 aa	Known RBP	4.93	□□□□□ -1.62
LSM1	YJL124C	CDC73	Q06697	393 aa		4.93	□□□□□ -1.62
LSM1	YJL124C	REF2	P42073	533 aa	Predicted RBP	4.91	□□□□□ -1.62
LSM1	YJL124C	BNI4	P53858	892 aa		4.91	□□□□□ -1.62
LSM1	YJL124C	ISU2	Q12056	156 aa		4.89	□□□□□ -1.63
LSM1	YJL124C	XDJ1	P39102	459 aa		4.88	□□□□□ -1.63
LSM1	YJL124C	PTC2	P39966	464 aa	Known RBP	4.88	□□□□□ -1.63
LSM1	YJL124C	ORC1	P54784	914 aa	Predicted RBP	4.88	□□□□□ -1.63
LSM1	YJL124C	YML082W	Q04533	649 aa	Known RBP	4.88	□□□□□ -1.63
LSM1	YJL124C	KIC1	P38692	1080 aa		4.86	□□□□□ -1.63
LSM1	YJL124C	RAM1	P22007	431 aa		4.85	□□□□□ -1.63
LSM1	YJL124C	YPR015C	Q12531	247 aa		4.85	□□□□□ -1.63
LSM1	YJL124C	COX6	P00427	148 aa		4.84	□□□□□ -1.63
LSM1	YJL124C	PDR1	P12383	1068 aa		4.84	□□□□□ -1.63
LSM1	YJL124C	GAP1	P19145	602 aa	Predicted RBP	4.84	□□□□□ -1.63
LSM1	YJL124C	MAK21	Q12176	1025 aa	Known RBP	4.83	□□□□□ -1.64
LSM1	YJL124C	RPP1B	P10622	106 aa	Known RBP	4.82	□□□□□ -1.64
LSM1	YJL124C	ORC6	P38826	435 aa		4.82	□□□□□ -1.64
LSM1	YJL124C	CKB1	P43639	278 aa		4.82	□□□□□ -1.64
LSM1	YJL124C	YRB30	P53107	440 aa	Predicted RBP	4.82	□□□□□ -1.64
LSM1	YJL124C	PBS2	P08018	668 aa		4.8	□□□□□ -1.64
LSM1	YJL124C	CSC1	Q06538	782 aa		4.8	□□□□□ -1.64
LSM1	YJL124C	YRR1	Q12172	810 aa		4.79	□□□□□ -1.64
LSM1	YJL124C	PEX21	P50091	288 aa		4.78	□□□□□ -1.64
LSM1	YJL124C	TFB4	Q12004	338 aa		4.78	□□□□□ -1.64
LSM1	YJL124C	TOP1	P04786	769 aa		4.77	□□□□□ -1.65
LSM1	YJL124C	TUM1	Q08686	304 aa	Known RBP	4.77	□□□□□ -1.65
LSM1	YJL124C	DPS1	P04802	557 aa	Known RBP	4.76	□□□□□ -1.65
LSM1	YJL124C	MVP1	P40959	511 aa	Known RBP	4.76	□□□□□ -1.65
LSM1	YJL124C	RGR1	P19263	1082 aa		4.75	□□□□□ -1.65
LSM1	YJL124C	YML020W	Q03722	664 aa		4.75	□□□□□ -1.65
LSM1	YJL124C	BUD20	Q08004	166 aa	Predicted RBP	4.75	□□□□□ -1.65
LSM1	YJL124C	DSF2	P38213	736 aa		4.74	□□□□□ -1.65
LSM1	YJL124C	STR2	P47164	639 aa		4.74	□□□□□ -1.65
LSM1	YJL124C	ISM1	P48526	1002 aa		4.74	□□□□□ -1.65
LSM1	YJL124C	GYP1	Q08484	637 aa		4.74	□□□□□ -1.65
LSM1	YJL124C	NUD1	P32336	851 aa		4.73	□□□□□ -1.65
LSM1	YJL124C	YPR109W	Q06104	294 aa		4.73	□□□□□ -1.65
LSM1	YJL124C	MAM3	Q12296	706 aa		4.73	□□□□□ -1.65
LSM1	YJL124C	SDH2	P21801	266 aa		4.72	□□□□□ -1.65
LSM1	YJL124C	NOP8	Q08287	484 aa	Predicted RBP	4.72	□□□□□ -1.65
LSM1	YJL124C	RAS1	P01119	309 aa		4.71	□□□□□ -1.66
LSM1	YJL124C	SNU71	P53207	620 aa	Known RBP	4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms