RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C MIF2P35201 549 aa10.88□□□□□ -0.67
CTK2YJL006C YEL023CP39992 682 aa10.87□□□□□ -0.67
CTK2YJL006C PTC4P38089 393 aa10.86□□□□□ -0.67
CTK2YJL006C SAP30P38429 201 aa10.85□□□□□ -0.67
CTK2YJL006C GRE2Q12068 342 aaKnown RBP10.85□□□□□ -0.67
CTK2YJL006C YDL129WQ07555 291 aa10.83□□□□□ -0.68
CTK2YJL006C EDS1P38073 919 aa10.8□□□□□ -0.68
CTK2YJL006C PTC3P34221 468 aaKnown RBP10.79□□□□□ -0.68
CTK2YJL006C ATH1P48016 1211 aa10.77□□□□□ -0.69
CTK2YJL006C COQ8P27697 501 aa10.74□□□□□ -0.69
CTK2YJL006C GUT1P32190 709 aa10.74□□□□□ -0.69
CTK2YJL006C CHL1P22516 861 aaPredicted RBP10.69□□□□□ -0.7
CTK2YJL006C PML39Q03760 334 aa10.67□□□□□ -0.7
CTK2YJL006C PRE3P38624 215 aa10.66□□□□□ -0.7
CTK2YJL006C BCK2P33306 851 aa10.6□□□□□ -0.71
CTK2YJL006C SOL3P38858 249 aa10.6□□□□□ -0.71
CTK2YJL006C NST1P53935 1240 aa10.6□□□□□ -0.71
CTK2YJL006C YDR344CQ05510 147 aa10.56□□□□□ -0.72
CTK2YJL006C NOP53Q12080 455 aaKnown RBP10.55□□□□□ -0.72
CTK2YJL006C MID1P41821 548 aa10.54□□□□□ -0.72
CTK2YJL006C ELP4Q02884 456 aaKnown RBP10.54□□□□□ -0.72
CTK2YJL006C MPH3P0CE00 602 aa10.52□□□□□ -0.73
CTK2YJL006C AI4P03878 556 aa10.51□□□□□ -0.73
CTK2YJL006C ARH1P48360 493 aa10.46□□□□□ -0.73
CTK2YJL006C YGR273CP53329 174 aa10.46□□□□□ -0.73
CTK2YJL006C ILV3P39522 585 aaKnown RBP10.45□□□□□ -0.74
CTK2YJL006C PEX29Q03370 554 aa10.45□□□□□ -0.74
CTK2YJL006C VRP1P37370 817 aa10.44□□□□□ -0.74
CTK2YJL006C XDJ1P39102 459 aa10.37□□□□□ -0.75
CTK2YJL006C SPT23P35210 1082 aa10.35□□□□□ -0.75
CTK2YJL006C HAP5Q02516 242 aa10.34□□□□□ -0.75
CTK2YJL006C SET1P38827 1080 aaKnown RBP10.33□□□□□ -0.76
CTK2YJL006C MPC54Q08550 464 aa10.32□□□□□ -0.76
CTK2YJL006C SLI15P38283 698 aa10.3□□□□□ -0.76
CTK2YJL006C KEX1P09620 729 aa10.25□□□□□ -0.77
CTK2YJL006C BNI4P53858 892 aa10.25□□□□□ -0.77
CTK2YJL006C NMA111P53920 997 aa10.25□□□□□ -0.77
CTK2YJL006C DPL1Q05567 589 aa10.23□□□□□ -0.77
CTK2YJL006C PTC2P39966 464 aaKnown RBP10.22□□□□□ -0.77
CTK2YJL006C YML082WQ04533 649 aaKnown RBP10.2□□□□□ -0.78
CTK2YJL006C UBP14P38237 781 aaKnown RBP10.17□□□□□ -0.78
CTK2YJL006C VHR2P40041 505 aa10.17□□□□□ -0.78
CTK2YJL006C YLR326WQ06170 240 aaKnown RBP10.17□□□□□ -0.78
CTK2YJL006C DPS1P04802 557 aaKnown RBP10.16□□□□□ -0.78
CTK2YJL006C CDC73Q06697 393 aa10.13□□□□□ -0.79
CTK2YJL006C ISU2Q12056 156 aa10.13□□□□□ -0.79
CTK2YJL006C PCS60P38137 543 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
CTK2YJL006C RAD54P32863 898 aa10.08□□□□□ -0.8
CTK2YJL006C IFH1P39520 1085 aa10.06□□□□□ -0.8
CTK2YJL006C YPR015CQ12531 247 aa10.04□□□□□ -0.8
CTK2YJL006C RAM1P22007 431 aa10.03□□□□□ -0.8
CTK2YJL006C RPP1BP10622 106 aaKnown RBP9.99□□□□□ -0.81
CTK2YJL006C YDR090CQ03193 310 aa9.99□□□□□ -0.81
CTK2YJL006C PDR1P12383 1068 aa9.97□□□□□ -0.81
CTK2YJL006C KIC1P38692 1080 aa9.97□□□□□ -0.81
CTK2YJL006C YPR148CQ06523 435 aa9.95□□□□□ -0.82
CTK2YJL006C REF2P42073 533 aaPredicted RBP9.93□□□□□ -0.82
CTK2YJL006C GYP1Q08484 637 aa9.93□□□□□ -0.82
CTK2YJL006C VPS70P47161 811 aa9.88□□□□□ -0.83
CTK2YJL006C RAS1P01119 309 aa9.87□□□□□ -0.83
CTK2YJL006C PEX21P50091 288 aa9.87□□□□□ -0.83
CTK2YJL006C SRC1Q03707 834 aa9.87□□□□□ -0.83
CTK2YJL006C YRR1Q12172 810 aa9.86□□□□□ -0.83
CTK2YJL006C SAS4Q04003 481 aa9.84□□□□□ -0.83
CTK2YJL006C GAP1P19145 602 aaPredicted RBP9.82□□□□□ -0.84
CTK2YJL006C CSC1Q06538 782 aa9.82□□□□□ -0.84
CTK2YJL006C TFB4Q12004 338 aa9.81□□□□□ -0.84
CTK2YJL006C COX6P00427 148 aa9.78□□□□□ -0.84
CTK2YJL006C AMS1P22855 1083 aa9.78□□□□□ -0.84
CTK2YJL006C BUD20Q08004 166 aaPredicted RBP9.78□□□□□ -0.84
CTK2YJL006C TUM1Q08686 304 aaKnown RBP9.78□□□□□ -0.84
CTK2YJL006C ORC6P38826 435 aa9.77□□□□□ -0.85
CTK2YJL006C MAK21Q12176 1025 aaKnown RBP9.77□□□□□ -0.85
CTK2YJL006C SDH2P21801 266 aa9.76□□□□□ -0.85
CTK2YJL006C PRT1P06103 763 aaKnown RBP9.74□□□□□ -0.85
CTK2YJL006C NUD1P32336 851 aa9.73□□□□□ -0.85
CTK2YJL006C STR2P47164 639 aa9.73□□□□□ -0.85
CTK2YJL006C ISM1P48526 1002 aa9.73□□□□□ -0.85
CTK2YJL006C MRF1P30775 413 aaPredicted RBP9.71□□□□□ -0.86
CTK2YJL006C YEL077CQ3E7X8 1277 aa9.7□□□□□ -0.86
CTK2YJL006C NPL4P33755 580 aa9.69□□□□□ -0.86
CTK2YJL006C MVP1P40959 511 aaKnown RBP9.69□□□□□ -0.86
CTK2YJL006C TRK1P12685 1235 aa9.64□□□□□ -0.87
CTK2YJL006C YPR109WQ06104 294 aa9.64□□□□□ -0.87
CTK2YJL006C RGR1P19263 1082 aa9.63□□□□□ -0.87
CTK2YJL006C GCD11P32481 527 aaKnown RBP9.63□□□□□ -0.87
CTK2YJL006C CKB1P43639 278 aa9.62□□□□□ -0.87
CTK2YJL006C ERG12P07277 443 aa9.61□□□□□ -0.87
CTK2YJL006C PBS2P08018 668 aa9.6□□□□□ -0.87
CTK2YJL006C TY1A-DR4O74302 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-HP0C2I4 478 aaKnown RBP9.59□□□□□ -0.87
CTK2YJL006C TY1A-AP0CX57 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-PR1P0CX58 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-ORP0CX59 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-PR2P0CX60 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-DR5P0CX65 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-ER2P0CX66 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-GR3P0CX67 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-LR1P0CX68 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-MR2P0CX69 440 aa9.59□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms