RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W JIP4Q03361 876 aa6.11□□□□□ -1.43
MSL1YIR009W COQ8P27697 501 aa6.09□□□□□ -1.43
MSL1YIR009W PTC3P34221 468 aaKnown RBP6.09□□□□□ -1.43
MSL1YIR009W GRE2Q12068 342 aaKnown RBP6.09□□□□□ -1.43
MSL1YIR009W YEL023CP39992 682 aa6.08□□□□□ -1.44
MSL1YIR009W PTC4P38089 393 aa6.07□□□□□ -1.44
MSL1YIR009W GUT1P32190 709 aa6.05□□□□□ -1.44
MSL1YIR009W TFG1P41895 735 aaPredicted RBP6.05□□□□□ -1.44
MSL1YIR009W ATH1P48016 1211 aa6.05□□□□□ -1.44
MSL1YIR009W YDL129WQ07555 291 aa6.02□□□□□ -1.45
MSL1YIR009W SAP30P38429 201 aa6.01□□□□□ -1.45
MSL1YIR009W NST1P53935 1240 aa6.01□□□□□ -1.45
MSL1YIR009W NOP53Q12080 455 aaKnown RBP6.01□□□□□ -1.45
MSL1YIR009W SOL3P38858 249 aa5.99□□□□□ -1.45
MSL1YIR009W PML39Q03760 334 aa5.95□□□□□ -1.46
MSL1YIR009W AI4P03878 556 aa5.93□□□□□ -1.46
MSL1YIR009W MPH3P0CE00 602 aa5.93□□□□□ -1.46
MSL1YIR009W CHL1P22516 861 aaPredicted RBP5.92□□□□□ -1.46
MSL1YIR009W PRE3P38624 215 aa5.92□□□□□ -1.46
MSL1YIR009W ILV3P39522 585 aaKnown RBP5.92□□□□□ -1.46
MSL1YIR009W YGR273CP53329 174 aa5.92□□□□□ -1.46
MSL1YIR009W SET1P38827 1080 aaKnown RBP5.91□□□□□ -1.46
MSL1YIR009W YDR344CQ05510 147 aa5.91□□□□□ -1.46
MSL1YIR009W MID1P41821 548 aa5.9□□□□□ -1.46
MSL1YIR009W BCK2P33306 851 aa5.85□□□□□ -1.47
MSL1YIR009W ARH1P48360 493 aa5.85□□□□□ -1.47
MSL1YIR009W ELP4Q02884 456 aaKnown RBP5.84□□□□□ -1.47
MSL1YIR009W PEX29Q03370 554 aa5.82□□□□□ -1.48
MSL1YIR009W KEX1P09620 729 aa5.81□□□□□ -1.48
MSL1YIR009W SLI15P38283 698 aa5.81□□□□□ -1.48
MSL1YIR009W MPC54Q08550 464 aa5.8□□□□□ -1.48
MSL1YIR009W VRP1P37370 817 aa5.78□□□□□ -1.48
MSL1YIR009W UBP14P38237 781 aaKnown RBP5.78□□□□□ -1.48
MSL1YIR009W HAP5Q02516 242 aa5.78□□□□□ -1.48
MSL1YIR009W YLR326WQ06170 240 aaKnown RBP5.78□□□□□ -1.48
MSL1YIR009W SPT23P35210 1082 aa5.77□□□□□ -1.49
MSL1YIR009W IFH1P39520 1085 aa5.77□□□□□ -1.49
MSL1YIR009W VHR2P40041 505 aa5.76□□□□□ -1.49
MSL1YIR009W BNI4P53858 892 aa5.75□□□□□ -1.49
MSL1YIR009W DPL1Q05567 589 aa5.75□□□□□ -1.49
MSL1YIR009W YPR148CQ06523 435 aa5.75□□□□□ -1.49
MSL1YIR009W XDJ1P39102 459 aa5.74□□□□□ -1.49
MSL1YIR009W NMA111P53920 997 aa5.74□□□□□ -1.49
MSL1YIR009W PCS60P38137 543 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
MSL1YIR009W RAD54P32863 898 aa5.71□□□□□ -1.5
MSL1YIR009W YML082WQ04533 649 aaKnown RBP5.71□□□□□ -1.5
MSL1YIR009W CDC73Q06697 393 aa5.71□□□□□ -1.5
MSL1YIR009W PTC2P39966 464 aaKnown RBP5.7□□□□□ -1.5
MSL1YIR009W YDR090CQ03193 310 aa5.7□□□□□ -1.5
MSL1YIR009W ISU2Q12056 156 aa5.69□□□□□ -1.5
MSL1YIR009W REF2P42073 533 aaPredicted RBP5.67□□□□□ -1.5
MSL1YIR009W VPS70P47161 811 aa5.66□□□□□ -1.5
MSL1YIR009W RAM1P22007 431 aa5.65□□□□□ -1.5
MSL1YIR009W YPR015CQ12531 247 aa5.65□□□□□ -1.5
MSL1YIR009W RPP1BP10622 106 aaKnown RBP5.63□□□□□ -1.51
MSL1YIR009W KIC1P38692 1080 aa5.63□□□□□ -1.51
MSL1YIR009W PDR1P12383 1068 aa5.61□□□□□ -1.51
MSL1YIR009W GAP1P19145 602 aaPredicted RBP5.61□□□□□ -1.51
MSL1YIR009W DPS1P04802 557 aaKnown RBP5.6□□□□□ -1.51
MSL1YIR009W COX6P00427 148 aa5.59□□□□□ -1.51
MSL1YIR009W MAK21Q12176 1025 aaKnown RBP5.59□□□□□ -1.51
MSL1YIR009W DMA1P38823 416 aa5.58□□□□□ -1.52
MSL1YIR009W ORC6P38826 435 aa5.58□□□□□ -1.52
MSL1YIR009W CSC1Q06538 782 aa5.57□□□□□ -1.52
MSL1YIR009W TFB4Q12004 338 aa5.56□□□□□ -1.52
MSL1YIR009W CKB1P43639 278 aa5.55□□□□□ -1.52
MSL1YIR009W PEX21P50091 288 aa5.55□□□□□ -1.52
MSL1YIR009W YRR1Q12172 810 aa5.55□□□□□ -1.52
MSL1YIR009W GYP1Q08484 637 aa5.54□□□□□ -1.52
MSL1YIR009W SAS10Q12136 610 aaPredicted RBP5.54□□□□□ -1.52
MSL1YIR009W PBS2P08018 668 aa5.52□□□□□ -1.53
MSL1YIR009W TUM1Q08686 304 aaKnown RBP5.52□□□□□ -1.53
MSL1YIR009W MVP1P40959 511 aaKnown RBP5.51□□□□□ -1.53
MSL1YIR009W STR2P47164 639 aa5.51□□□□□ -1.53
MSL1YIR009W SAS4Q04003 481 aa5.51□□□□□ -1.53
MSL1YIR009W BUD20Q08004 166 aaPredicted RBP5.51□□□□□ -1.53
MSL1YIR009W NUD1P32336 851 aa5.5□□□□□ -1.53
MSL1YIR009W RAS1P01119 309 aa5.49□□□□□ -1.53
MSL1YIR009W RGR1P19263 1082 aa5.49□□□□□ -1.53
MSL1YIR009W SDH2P21801 266 aa5.49□□□□□ -1.53
MSL1YIR009W ISM1P48526 1002 aa5.49□□□□□ -1.53
MSL1YIR009W SRC1Q03707 834 aa5.49□□□□□ -1.53
MSL1YIR009W PRT1P06103 763 aaKnown RBP5.48□□□□□ -1.53
MSL1YIR009W AMS1P22855 1083 aa5.46□□□□□ -1.54
MSL1YIR009W DSF2P38213 736 aa5.46□□□□□ -1.54
MSL1YIR009W YPR109WQ06104 294 aa5.46□□□□□ -1.54
MSL1YIR009W MAM3Q12296 706 aa5.45□□□□□ -1.54
MSL1YIR009W TY1A-DR4O74302 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-HP0C2I4 478 aaKnown RBP5.44□□□□□ -1.54
MSL1YIR009W TY1A-AP0CX57 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-PR1P0CX58 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-ORP0CX59 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-PR2P0CX60 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-DR5P0CX65 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-ER2P0CX66 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-GR3P0CX67 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-LR1P0CX68 440 aa5.44□□□□□ -1.54
MSL1YIR009W TY1A-MR2P0CX69 440 aa5.44□□□□□ -1.54
MSL1YIR009W PSE1P32337 1089 aaKnown RBP5.44□□□□□ -1.54
MSL1YIR009W NPL4P33755 580 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms