RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC80YIL144W LEU3P08638 886 aa6.24□□□□□ -1.41
NDC80YIL144W DPS1P04802 557 aaKnown RBP6.24□□□□□ -1.41
NDC80YIL144W VRP1P37370 817 aa6.24□□□□□ -1.41
NDC80YIL144W JIP4Q03361 876 aa6.22□□□□□ -1.41
NDC80YIL144W MAK11P20484 414 aaKnown RBP6.21□□□□□ -1.41
NDC80YIL144W YPR148CQ06523 435 aa6.2□□□□□ -1.42
NDC80YIL144W SAM3Q08986 587 aa6.2□□□□□ -1.42
NDC80YIL144W VMA1P17255 1071 aaKnown RBP6.17□□□□□ -1.42
NDC80YIL144W STS1P38637 319 aa6.17□□□□□ -1.42
NDC80YIL144W DBP1P24784 617 aaKnown RBP6.15□□□□□ -1.42
NDC80YIL144W VPS70P47161 811 aa6.15□□□□□ -1.42
NDC80YIL144W TAF7Q05021 590 aa6.15□□□□□ -1.42
NDC80YIL144W COQ8P27697 501 aa6.14□□□□□ -1.43
NDC80YIL144W YMR1P47147 688 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
NDC80YIL144W EDS1P38073 919 aa6.11□□□□□ -1.43
NDC80YIL144W YFR006WP43590 535 aa6.11□□□□□ -1.43
NDC80YIL144W SRC1Q03707 834 aa6.1□□□□□ -1.43
NDC80YIL144W ABP1P15891 592 aaKnown RBP6.09□□□□□ -1.43
NDC80YIL144W CKB1P43639 278 aa6.08□□□□□ -1.44
NDC80YIL144W IFH1P39520 1085 aa6.08□□□□□ -1.44
NDC80YIL144W PTC4P38089 393 aa6.07□□□□□ -1.44
NDC80YIL144W SPB4P25808 606 aaPredicted RBP6.06□□□□□ -1.44
NDC80YIL144W YDR344CQ05510 147 aa6.06□□□□□ -1.44
NDC80YIL144W MIF2P35201 549 aa6.06□□□□□ -1.44
NDC80YIL144W ELP4Q02884 456 aaKnown RBP6.06□□□□□ -1.44
NDC80YIL144W HTA1P04911 132 aaKnown RBP6.05□□□□□ -1.44
NDC80YIL144W HTA2P04912 132 aa6.05□□□□□ -1.44
NDC80YIL144W GYP5Q12344 894 aa6.05□□□□□ -1.44
NDC80YIL144W DSF2P38213 736 aa6.03□□□□□ -1.44
NDC80YIL144W YEL023CP39992 682 aa6.03□□□□□ -1.44
NDC80YIL144W NOP53Q12080 455 aaKnown RBP6.03□□□□□ -1.44
NDC80YIL144W RPN1P38764 993 aaKnown RBP6.02□□□□□ -1.45
NDC80YIL144W PBS2P08018 668 aa6.02□□□□□ -1.45
NDC80YIL144W DCW1P36091 449 aa6.02□□□□□ -1.45
NDC80YIL144W PTC3P34221 468 aaKnown RBP6.01□□□□□ -1.45
NDC80YIL144W REF2P42073 533 aaPredicted RBP5.95□□□□□ -1.46
NDC80YIL144W PML39Q03760 334 aa5.95□□□□□ -1.46
NDC80YIL144W DMA2P53924 522 aa5.95□□□□□ -1.46
NDC80YIL144W NUP42P49686 430 aaKnown RBP5.94□□□□□ -1.46
NDC80YIL144W DIT2P21595 489 aa5.92□□□□□ -1.46
NDC80YIL144W ARH1P48360 493 aa5.92□□□□□ -1.46
NDC80YIL144W UBP14P38237 781 aaKnown RBP5.91□□□□□ -1.46
NDC80YIL144W YDR090CQ03193 310 aa5.91□□□□□ -1.46
NDC80YIL144W MAM3Q12296 706 aa5.91□□□□□ -1.46
NDC80YIL144W COX6P00427 148 aa5.9□□□□□ -1.47
NDC80YIL144W IES2P40154 320 aa5.9□□□□□ -1.47
NDC80YIL144W SOL3P38858 249 aa5.89□□□□□ -1.47
NDC80YIL144W YNR021WP53723 404 aaKnown RBP5.89□□□□□ -1.47
NDC80YIL144W GLC3P32775 704 aa5.88□□□□□ -1.47
NDC80YIL144W SPT23P35210 1082 aa5.87□□□□□ -1.47
NDC80YIL144W VHR2P40041 505 aa5.87□□□□□ -1.47
NDC80YIL144W KIN1P13185 1064 aa5.87□□□□□ -1.47
NDC80YIL144W YLR326WQ06170 240 aaKnown RBP5.87□□□□□ -1.47
NDC80YIL144W GRE2Q12068 342 aaKnown RBP5.87□□□□□ -1.47
NDC80YIL144W GUT1P32190 709 aa5.86□□□□□ -1.47
NDC80YIL144W ATH1P48016 1211 aa5.86□□□□□ -1.47
NDC80YIL144W NST1P53935 1240 aa5.86□□□□□ -1.47
NDC80YIL144W MAK21Q12176 1025 aaKnown RBP5.85□□□□□ -1.47
NDC80YIL144W YGR273CP53329 174 aa5.84□□□□□ -1.47
NDC80YIL144W AIM7Q12156 149 aa5.83□□□□□ -1.48
NDC80YIL144W PCS60P38137 543 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
NDC80YIL144W KEX1P09620 729 aa5.8□□□□□ -1.48
NDC80YIL144W GUA1P38625 525 aaKnown RBP5.79□□□□□ -1.48
NDC80YIL144W MID1P41821 548 aa5.79□□□□□ -1.48
NDC80YIL144W RAS1P01119 309 aa5.78□□□□□ -1.48
NDC80YIL144W ILV3P39522 585 aaKnown RBP5.78□□□□□ -1.48
NDC80YIL144W YPL062WQ02781 134 aa5.77□□□□□ -1.49
NDC80YIL144W YML082WQ04533 649 aaKnown RBP5.76□□□□□ -1.49
NDC80YIL144W PEX29Q03370 554 aa5.75□□□□□ -1.49
NDC80YIL144W HAP5Q02516 242 aa5.75□□□□□ -1.49
NDC80YIL144W RAD54P32863 898 aa5.74□□□□□ -1.49
NDC80YIL144W BNI4P53858 892 aa5.74□□□□□ -1.49
NDC80YIL144W TRK1P12685 1235 aa5.73□□□□□ -1.49
NDC80YIL144W ORC6P38826 435 aa5.73□□□□□ -1.49
NDC80YIL144W ATF2P53296 535 aa5.73□□□□□ -1.49
NDC80YIL144W MPH3P0CE00 602 aa5.72□□□□□ -1.49
NDC80YIL144W PTC2P39966 464 aaKnown RBP5.72□□□□□ -1.49
NDC80YIL144W AI4P03878 556 aa5.71□□□□□ -1.5
NDC80YIL144W PSE1P32337 1089 aaKnown RBP5.71□□□□□ -1.5
NDC80YIL144W KIC1P38692 1080 aa5.71□□□□□ -1.5
NDC80YIL144W SLI15P38283 698 aa5.69□□□□□ -1.5
NDC80YIL144W RGR1P19263 1082 aa5.68□□□□□ -1.5
NDC80YIL144W GAP1P19145 602 aaPredicted RBP5.68□□□□□ -1.5
NDC80YIL144W RLF2Q12495 606 aa5.68□□□□□ -1.5
NDC80YIL144W KTR1P27810 393 aaKnown RBP5.67□□□□□ -1.5
NDC80YIL144W MVP1P40959 511 aaKnown RBP5.67□□□□□ -1.5
NDC80YIL144W HPC2Q01448 625 aa5.66□□□□□ -1.5
NDC80YIL144W TFB3Q03290 321 aa5.66□□□□□ -1.5
NDC80YIL144W PKC1P24583 1151 aa5.65□□□□□ -1.51
NDC80YIL144W TEA1P47988 759 aa5.63□□□□□ -1.51
NDC80YIL144W CDC73Q06697 393 aa5.63□□□□□ -1.51
NDC80YIL144W CSN12P47130 423 aa5.62□□□□□ -1.51
NDC80YIL144W TYW1Q08960 810 aaKnown RBP5.62□□□□□ -1.51
NDC80YIL144W AMS1P22855 1083 aa5.61□□□□□ -1.51
NDC80YIL144W NIS1P53939 407 aa5.61□□□□□ -1.51
NDC80YIL144W YPR109WQ06104 294 aa5.59□□□□□ -1.52
NDC80YIL144W FPK1P53739 893 aa5.57□□□□□ -1.52
NDC80YIL144W CSC1Q06538 782 aa5.57□□□□□ -1.52
NDC80YIL144W SSA2P10592 639 aaKnown RBP5.57□□□□□ -1.52
NDC80YIL144W SCJ1P25303 377 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms