RNA–Protein interactions for RNA: YIL090W

ICE2, Transcript of Integral ER membrane protein with type-III transmembrane domains, yeast

Gene ICE2, Length 1,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Mitochondria .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ICE2	YIL090W	EAP1	P36041	632 aa	Known RBP	11.38	□□□□□ -0.59
ICE2	YIL090W	TIF11	P38912	153 aa	Known RBP	11.37	□□□□□ -0.59
ICE2	YIL090W	PBS2	P08018	668 aa		11.35	□□□□□ -0.59
ICE2	YIL090W	SOL3	P38858	249 aa		11.35	□□□□□ -0.59
ICE2	YIL090W	YGR273C	P53329	174 aa		11.34	□□□□□ -0.59
ICE2	YIL090W	ULI1	P43604	169 aa		11.33	□□□□□ -0.6
ICE2	YIL090W	TRP5	P00931	707 aa	Known RBP	11.32	□□□□□ -0.6
ICE2	YIL090W	LEU3	P08638	886 aa		11.32	□□□□□ -0.6
ICE2	YIL090W	VHR2	P40041	505 aa		11.32	□□□□□ -0.6
ICE2	YIL090W	NST1	P53935	1240 aa		11.29	□□□□□ -0.6
ICE2	YIL090W	UBP14	P38237	781 aa	Known RBP	11.28	□□□□□ -0.6
ICE2	YIL090W	DSF2	P38213	736 aa		11.27	□□□□□ -0.6
ICE2	YIL090W	YEL023C	P39992	682 aa		11.27	□□□□□ -0.6
ICE2	YIL090W	YLR326W	Q06170	240 aa	Known RBP	11.26	□□□□□ -0.61
ICE2	YIL090W	IOC2	Q12072	812 aa		11.26	□□□□□ -0.61
ICE2	YIL090W	KEX1	P09620	729 aa		11.22	□□□□□ -0.61
ICE2	YIL090W	MAK21	Q12176	1025 aa	Known RBP	11.22	□□□□□ -0.61
ICE2	YIL090W	COX6	P00427	148 aa		11.21	□□□□□ -0.61
ICE2	YIL090W	PTC4	P38089	393 aa		11.21	□□□□□ -0.61
ICE2	YIL090W	YDR090C	Q03193	310 aa		11.21	□□□□□ -0.61
ICE2	YIL090W	MPH3	P0CE00	602 aa		11.2	□□□□□ -0.62
ICE2	YIL090W	MAM3	Q12296	706 aa		11.2	□□□□□ -0.62
ICE2	YIL090W	AI4	P03878	556 aa		11.19	□□□□□ -0.62
ICE2	YIL090W	JIP4	Q03361	876 aa		11.19	□□□□□ -0.62
ICE2	YIL090W	LDB19	Q12502	818 aa		11.19	□□□□□ -0.62
ICE2	YIL090W	ILV3	P39522	585 aa	Known RBP	11.17	□□□□□ -0.62
ICE2	YIL090W	RAD54	P32863	898 aa		11.16	□□□□□ -0.62
ICE2	YIL090W	KIC1	P38692	1080 aa		11.15	□□□□□ -0.62
ICE2	YIL090W	YNL035C	P53962	389 aa	Known RBP	11.15	□□□□□ -0.62
ICE2	YIL090W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.14	□□□□□ -0.63	not detected
ICE2	YIL090W	IES2	P40154	320 aa		11.14	□□□□□ -0.63
ICE2	YIL090W	DAN4	P47179	1161 aa		11.13	□□□□□ -0.63
ICE2	YIL090W	RTG1	P32607	177 aa		11.12	□□□□□ -0.63
ICE2	YIL090W	LEO1	P38439	464 aa		11.12	□□□□□ -0.63
ICE2	YIL090W	NUP42	P49686	430 aa	Known RBP	11.06	□□□□□ -0.64
ICE2	YIL090W	SEC61	P32915	480 aa		11.06	□□□□□ -0.64
ICE2	YIL090W	SLI15	P38283	698 aa		11.06	□□□□□ -0.64
ICE2	YIL090W	RPN1	P38764	993 aa	Known RBP	11.06	□□□□□ -0.64
ICE2	YIL090W	DIT2	P21595	489 aa		11.04	□□□□□ -0.64
ICE2	YIL090W	NCR1	Q12200	1170 aa		11.02	□□□□□ -0.65
ICE2	YIL090W	PML39	Q03760	334 aa		11.01	□□□□□ -0.65
ICE2	YIL090W	FKH1	P40466	484 aa		11	□□□□□ -0.65
ICE2	YIL090W	YNR021W	P53723	404 aa	Known RBP	11	□□□□□ -0.65
ICE2	YIL090W	SIS1	P25294	352 aa	Known RBP	10.99	□□□□□ -0.65
ICE2	YIL090W	MID1	P41821	548 aa		10.99	□□□□□ -0.65
ICE2	YIL090W	TFG1	P41895	735 aa	Predicted RBP	10.99	□□□□□ -0.65
ICE2	YIL090W	GLC3	P32775	704 aa		10.95	□□□□□ -0.66
ICE2	YIL090W	ORC6	P38826	435 aa		10.95	□□□□□ -0.66
ICE2	YIL090W	AIR2	Q12476	344 aa	Known RBP	10.93	□□□□□ -0.66
ICE2	YIL090W	CDC73	Q06697	393 aa		10.93	□□□□□ -0.66
ICE2	YIL090W	YDL129W	Q07555	291 aa		10.92	□□□□□ -0.66
ICE2	YIL090W	RPP1B	P10622	106 aa	Known RBP	10.91	□□□□□ -0.66
ICE2	YIL090W	PSE1	P32337	1089 aa	Known RBP	10.9	□□□□□ -0.66
ICE2	YIL090W	MPC54	Q08550	464 aa		10.88	□□□□□ -0.67
ICE2	YIL090W	PEX29	Q03370	554 aa		10.87	□□□□□ -0.67
ICE2	YIL090W	ATF2	P53296	535 aa		10.87	□□□□□ -0.67
ICE2	YIL090W	DPL1	Q05567	589 aa		10.87	□□□□□ -0.67
ICE2	YIL090W	SAP30	P38429	201 aa		10.86	□□□□□ -0.67
ICE2	YIL090W	AIM7	Q12156	149 aa		10.86	□□□□□ -0.67
ICE2	YIL090W	GAP1	P19145	602 aa	Predicted RBP	10.85	□□□□□ -0.67
ICE2	YIL090W	CSC1	Q06538	782 aa		10.84	□□□□□ -0.67
ICE2	YIL090W	RGR1	P19263	1082 aa		10.83	□□□□□ -0.68
ICE2	YIL090W	KIN1	P13185	1064 aa		10.82	□□□□□ -0.68
ICE2	YIL090W	MVP1	P40959	511 aa	Known RBP	10.82	□□□□□ -0.68
ICE2	YIL090W	YJL171C	P46992	396 aa		10.79	□□□□□ -0.68
ICE2	YIL090W	PEX21	P50091	288 aa		10.79	□□□□□ -0.68
ICE2	YIL090W	NMA111	P53920	997 aa		10.79	□□□□□ -0.68
ICE2	YIL090W	TFB4	Q12004	338 aa		10.78	□□□□□ -0.68
ICE2	YIL090W	ISU2	Q12056	156 aa		10.77	□□□□□ -0.69
ICE2	YIL090W	BMT6	Q12291	365 aa		10.77	□□□□□ -0.69
ICE2	YIL090W	YPR109W	Q06104	294 aa		10.75	□□□□□ -0.69
ICE2	YIL090W	TEA1	P47988	759 aa		10.74	□□□□□ -0.69
ICE2	YIL090W	YDR344C	Q05510	147 aa		10.74	□□□□□ -0.69
ICE2	YIL090W	TUM1	Q08686	304 aa	Known RBP	10.74	□□□□□ -0.69
ICE2	YIL090W	ARH1	P48360	493 aa		10.73	□□□□□ -0.69
ICE2	YIL090W	HAP5	Q02516	242 aa		10.72	□□□□□ -0.69
ICE2	YIL090W	CLB5	P30283	435 aa		10.71	□□□□□ -0.69
ICE2	YIL090W	YRR1	Q12172	810 aa		10.71	□□□□□ -0.69
ICE2	YIL090W	ELP4	Q02884	456 aa	Known RBP	10.69	□□□□□ -0.7
ICE2	YIL090W	PDR1	P12383	1068 aa		10.61	□□□□□ -0.71
ICE2	YIL090W	PRE3	P38624	215 aa		10.61	□□□□□ -0.71
ICE2	YIL090W	NIS1	P53939	407 aa		10.61	□□□□□ -0.71
ICE2	YIL090W	GUA1	P38625	525 aa	Known RBP	10.61	□□□□□ -0.71
ICE2	YIL090W	BNI4	P53858	892 aa		10.61	□□□□□ -0.71
ICE2	YIL090W	SPT23	P35210	1082 aa		10.59	□□□□□ -0.71
ICE2	YIL090W	CHL1	P22516	861 aa	Predicted RBP	10.57	□□□□□ -0.72
ICE2	YIL090W	DMA2	P53924	522 aa		10.57	□□□□□ -0.72
ICE2	YIL090W	NUD1	P32336	851 aa		10.56	□□□□□ -0.72
ICE2	YIL090W	CSN12	P47130	423 aa		10.56	□□□□□ -0.72
ICE2	YIL090W	FPK1	P53739	893 aa		10.56	□□□□□ -0.72
ICE2	YIL090W	YMR196W	Q04336	1088 aa		10.55	□□□□□ -0.72
ICE2	YIL090W	PTC2	P39966	464 aa	Known RBP	10.55	□□□□□ -0.72
ICE2	YIL090W	SIT4	P20604	311 aa		10.52	□□□□□ -0.73
ICE2	YIL090W	TYW1	Q08960	810 aa	Known RBP	10.52	□□□□□ -0.73
ICE2	YIL090W	RAM1	P22007	431 aa		10.51	□□□□□ -0.73
ICE2	YIL090W	KTR1	P27810	393 aa	Known RBP	10.5	□□□□□ -0.73
ICE2	YIL090W	NPL4	P33755	580 aa		10.5	□□□□□ -0.73
ICE2	YIL090W	HST2	P53686	357 aa		10.5	□□□□□ -0.73
ICE2	YIL090W	STR2	P47164	639 aa		10.49	□□□□□ -0.73
ICE2	YIL090W	ISM1	P48526	1002 aa		10.49	□□□□□ -0.73

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms