RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	ULI1	P43604	169 aa		6.6	□□□□□ -1.35
VHR1	YIL056W	YPR148C	Q06523	435 aa		6.6	□□□□□ -1.35
VHR1	YIL056W	TRP5	P00931	707 aa	Known RBP	6.56	□□□□□ -1.36
VHR1	YIL056W	REF2	P42073	533 aa	Predicted RBP	6.55	□□□□□ -1.36
VHR1	YIL056W	VHR2	P40041	505 aa		6.53	□□□□□ -1.36
VHR1	YIL056W	PBS2	P08018	668 aa		6.52	□□□□□ -1.37
VHR1	YIL056W	KIC1	P38692	1080 aa		6.52	□□□□□ -1.37
VHR1	YIL056W	YEL023C	P39992	682 aa		6.52	□□□□□ -1.37
VHR1	YIL056W	SIS1	P25294	352 aa	Known RBP	6.51	□□□□□ -1.37
VHR1	YIL056W	YGR273C	P53329	174 aa		6.51	□□□□□ -1.37
VHR1	YIL056W	LDB19	Q12502	818 aa		6.5	□□□□□ -1.37
VHR1	YIL056W	TFG1	P41895	735 aa	Predicted RBP	6.5	□□□□□ -1.37
VHR1	YIL056W	JIP4	Q03361	876 aa		6.48	□□□□□ -1.37
VHR1	YIL056W	RTG1	P32607	177 aa		6.48	□□□□□ -1.37
VHR1	YIL056W	PTC4	P38089	393 aa		6.48	□□□□□ -1.37
VHR1	YIL056W	YNL035C	P53962	389 aa	Known RBP	6.47	□□□□□ -1.37
VHR1	YIL056W	IOC2	Q12072	812 aa		6.47	□□□□□ -1.37
VHR1	YIL056W	SOL3	P38858	249 aa		6.46	□□□□□ -1.38
VHR1	YIL056W	RAD54	P32863	898 aa		6.45	□□□□□ -1.38
VHR1	YIL056W	MAK21	Q12176	1025 aa	Known RBP	6.44	□□□□□ -1.38
VHR1	YIL056W	MAM3	Q12296	706 aa		6.44	□□□□□ -1.38
VHR1	YIL056W	KEX1	P09620	729 aa		6.44	□□□□□ -1.38
VHR1	YIL056W	MPH3	P0CE00	602 aa		6.43	□□□□□ -1.38
VHR1	YIL056W	YLR326W	Q06170	240 aa	Known RBP	6.43	□□□□□ -1.38
VHR1	YIL056W	AI4	P03878	556 aa		6.42	□□□□□ -1.38
VHR1	YIL056W	UBP14	P38237	781 aa	Known RBP	6.42	□□□□□ -1.38
VHR1	YIL056W	NCR1	Q12200	1170 aa		6.42	□□□□□ -1.38
VHR1	YIL056W	DAN4	P47179	1161 aa		6.41	□□□□□ -1.38
VHR1	YIL056W	COX6	P00427	148 aa		6.4	□□□□□ -1.38
VHR1	YIL056W	SEC61	P32915	480 aa		6.4	□□□□□ -1.38
VHR1	YIL056W	DSF2	P38213	736 aa		6.4	□□□□□ -1.38
VHR1	YIL056W	PEX29	Q03370	554 aa		6.4	□□□□□ -1.38
VHR1	YIL056W	IES2	P40154	320 aa		6.4	□□□□□ -1.39
VHR1	YIL056W	LEU3	P08638	886 aa		6.39	□□□□□ -1.39
VHR1	YIL056W	RPP1B	P10622	106 aa	Known RBP	6.39	□□□□□ -1.39
VHR1	YIL056W	YJL171C	P46992	396 aa		6.39	□□□□□ -1.39
VHR1	YIL056W	PML39	Q03760	334 aa		6.39	□□□□□ -1.39
VHR1	YIL056W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.37	□□□□□ -1.39	not detected
VHR1	YIL056W	NST1	P53935	1240 aa		6.37	□□□□□ -1.39
VHR1	YIL056W	YDR090C	Q03193	310 aa		6.37	□□□□□ -1.39
VHR1	YIL056W	ILV3	P39522	585 aa	Known RBP	6.36	□□□□□ -1.39
VHR1	YIL056W	FKH1	P40466	484 aa		6.35	□□□□□ -1.39
VHR1	YIL056W	SLI15	P38283	698 aa		6.35	□□□□□ -1.39
VHR1	YIL056W	YDL129W	Q07555	291 aa		6.34	□□□□□ -1.39
VHR1	YIL056W	SAP30	P38429	201 aa		6.33	□□□□□ -1.4
VHR1	YIL056W	MID1	P41821	548 aa		6.33	□□□□□ -1.4
VHR1	YIL056W	PEX21	P50091	288 aa		6.32	□□□□□ -1.4
VHR1	YIL056W	RPN1	P38764	993 aa	Known RBP	6.31	□□□□□ -1.4
VHR1	YIL056W	AIR2	Q12476	344 aa	Known RBP	6.31	□□□□□ -1.4
VHR1	YIL056W	BMT6	Q12291	365 aa		6.31	□□□□□ -1.4
VHR1	YIL056W	ATF2	P53296	535 aa		6.3	□□□□□ -1.4
VHR1	YIL056W	DIT2	P21595	489 aa		6.29	□□□□□ -1.4
VHR1	YIL056W	LEO1	P38439	464 aa		6.29	□□□□□ -1.4
VHR1	YIL056W	CDC73	Q06697	393 aa		6.29	□□□□□ -1.4
VHR1	YIL056W	YNR021W	P53723	404 aa	Known RBP	6.28	□□□□□ -1.4
VHR1	YIL056W	DPL1	Q05567	589 aa		6.28	□□□□□ -1.4
VHR1	YIL056W	NUP42	P49686	430 aa	Known RBP	6.27	□□□□□ -1.41
VHR1	YIL056W	ELP4	Q02884	456 aa	Known RBP	6.27	□□□□□ -1.41
VHR1	YIL056W	GLC3	P32775	704 aa		6.27	□□□□□ -1.41
VHR1	YIL056W	MPC54	Q08550	464 aa		6.26	□□□□□ -1.41
VHR1	YIL056W	CSC1	Q06538	782 aa		6.25	□□□□□ -1.41
VHR1	YIL056W	PSE1	P32337	1089 aa	Known RBP	6.24	□□□□□ -1.41
VHR1	YIL056W	NMA111	P53920	997 aa		6.24	□□□□□ -1.41
VHR1	YIL056W	ORC6	P38826	435 aa		6.23	□□□□□ -1.41
VHR1	YIL056W	ISU2	Q12056	156 aa		6.23	□□□□□ -1.41
VHR1	YIL056W	HAP5	Q02516	242 aa		6.21	□□□□□ -1.42
VHR1	YIL056W	TUM1	Q08686	304 aa	Known RBP	6.21	□□□□□ -1.42
VHR1	YIL056W	TFB4	Q12004	338 aa		6.21	□□□□□ -1.42
VHR1	YIL056W	TEA1	P47988	759 aa		6.2	□□□□□ -1.42
VHR1	YIL056W	YPR109W	Q06104	294 aa		6.2	□□□□□ -1.42
VHR1	YIL056W	YRR1	Q12172	810 aa		6.2	□□□□□ -1.42
VHR1	YIL056W	MVP1	P40959	511 aa	Known RBP	6.19	□□□□□ -1.42
VHR1	YIL056W	RGR1	P19263	1082 aa		6.19	□□□□□ -1.42
VHR1	YIL056W	KIN1	P13185	1064 aa		6.18	□□□□□ -1.42
VHR1	YIL056W	ARH1	P48360	493 aa		6.18	□□□□□ -1.42
VHR1	YIL056W	CLB5	P30283	435 aa		6.17	□□□□□ -1.42
VHR1	YIL056W	AIM7	Q12156	149 aa		6.17	□□□□□ -1.42
VHR1	YIL056W	NPL4	P33755	580 aa		6.15	□□□□□ -1.42
VHR1	YIL056W	SPT23	P35210	1082 aa		6.15	□□□□□ -1.42
VHR1	YIL056W	PRE3	P38624	215 aa		6.15	□□□□□ -1.42
VHR1	YIL056W	PTC2	P39966	464 aa	Known RBP	6.15	□□□□□ -1.43
VHR1	YIL056W	YMR196W	Q04336	1088 aa		6.15	□□□□□ -1.43
VHR1	YIL056W	CHL1	P22516	861 aa	Predicted RBP	6.14	□□□□□ -1.43
VHR1	YIL056W	GAP1	P19145	602 aa	Predicted RBP	6.13	□□□□□ -1.43
VHR1	YIL056W	YDR344C	Q05510	147 aa		6.13	□□□□□ -1.43
VHR1	YIL056W	BNI4	P53858	892 aa		6.11	□□□□□ -1.43
VHR1	YIL056W	PDR1	P12383	1068 aa		6.11	□□□□□ -1.43
VHR1	YIL056W	NUD1	P32336	851 aa		6.09	□□□□□ -1.43
VHR1	YIL056W	GCD11	P32481	527 aa	Known RBP	6.07	□□□□□ -1.44
VHR1	YIL056W	CSN12	P47130	423 aa		6.07	□□□□□ -1.44
VHR1	YIL056W	HGH1	P48362	394 aa	Known RBP	6.07	□□□□□ -1.44
VHR1	YIL056W	NIS1	P53939	407 aa		6.06	□□□□□ -1.44
VHR1	YIL056W	FPK1	P53739	893 aa		6.05	□□□□□ -1.44
VHR1	YIL056W	GLN1	P32288	370 aa	Known RBP	6.04	□□□□□ -1.44
VHR1	YIL056W	MMP1	Q12372	583 aa		6.04	□□□□□ -1.44
VHR1	YIL056W	SSA2	P10592	639 aa	Known RBP	6.03	□□□□□ -1.44
VHR1	YIL056W	KEX2	P13134	814 aa		6.03	□□□□□ -1.44
VHR1	YIL056W	GYP1	Q08484	637 aa		6.03	□□□□□ -1.44
VHR1	YIL056W	TYW1	Q08960	810 aa	Known RBP	6.03	□□□□□ -1.44
VHR1	YIL056W	VRP1	P37370	817 aa		6.03	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms