RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeastyeast

Gene LSM12, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM12YHR121W RTG1P32607 177 aa11.94□□□□□ -0.5
LSM12YHR121W JIP4Q03361 876 aa11.94□□□□□ -0.5
LSM12YHR121W AIR2Q12476 344 aaKnown RBP11.93□□□□□ -0.5
LSM12YHR121W YEL023CP39992 682 aa11.91□□□□□ -0.5
LSM12YHR121W SEC61P32915 480 aa11.9□□□□□ -0.5
LSM12YHR121W YJL171CP46992 396 aa11.88□□□□□ -0.51
LSM12YHR121W PTC4P38089 393 aa11.87□□□□□ -0.51
LSM12YHR121W DMA1P38823 416 aa11.86□□□□□ -0.51
LSM12YHR121W NCR1Q12200 1170 aa11.86□□□□□ -0.51
LSM12YHR121W TFG1P41895 735 aaPredicted RBP11.85□□□□□ -0.51
LSM12YHR121W IFH1P39520 1085 aa11.83□□□□□ -0.52
LSM12YHR121W DAN4P47179 1161 aa11.83□□□□□ -0.52
LSM12YHR121W RQC2Q12532 1038 aaKnown RBP11.8□□□□□ -0.52
LSM12YHR121W BMT6Q12291 365 aa11.78□□□□□ -0.52
LSM12YHR121W SOL3P38858 249 aa11.73□□□□□ -0.53
LSM12YHR121W YGR273CP53329 174 aa11.73□□□□□ -0.53
LSM12YHR121W NST1P53935 1240 aa11.72□□□□□ -0.53
LSM12YHR121W AI4P03878 556 aa11.7□□□□□ -0.54
LSM12YHR121W YDL129WQ07555 291 aa11.7□□□□□ -0.54
LSM12YHR121W MPH3P0CE00 602 aa11.68□□□□□ -0.54
LSM12YHR121W YPR148CQ06523 435 aa11.68□□□□□ -0.54
LSM12YHR121W SAP30P38429 201 aa11.65□□□□□ -0.54
LSM12YHR121W PML39Q03760 334 aa11.64□□□□□ -0.55
LSM12YHR121W VPS70P47161 811 aa11.6□□□□□ -0.55
LSM12YHR121W ILV3P39522 585 aaKnown RBP11.58□□□□□ -0.56
LSM12YHR121W KEX1P09620 729 aa11.55□□□□□ -0.56
LSM12YHR121W VHR2P40041 505 aa11.55□□□□□ -0.56
LSM12YHR121W PEX29Q03370 554 aa11.52□□□□□ -0.57
LSM12YHR121W UBP14P38237 781 aaKnown RBP11.51□□□□□ -0.57
LSM12YHR121W MID1P41821 548 aa11.51□□□□□ -0.57
LSM12YHR121W REF2P42073 533 aaPredicted RBP11.51□□□□□ -0.57
LSM12YHR121W YLR326WQ06170 240 aaKnown RBP11.51□□□□□ -0.57
LSM12YHR121W SAS10Q12136 610 aaPredicted RBP11.5□□□□□ -0.57
LSM12YHR121W CKB1P43639 278 aa11.48□□□□□ -0.57
LSM12YHR121W RAD54P32863 898 aa11.46□□□□□ -0.57
LSM12YHR121W SLI15P38283 698 aa11.46□□□□□ -0.57
LSM12YHR121W PRE3P38624 215 aa11.44□□□□□ -0.58
LSM12YHR121W KIC1P38692 1080 aa11.44□□□□□ -0.58
LSM12YHR121W CHL1P22516 861 aaPredicted RBP11.43□□□□□ -0.58
LSM12YHR121W ELP4Q02884 456 aaKnown RBP11.42□□□□□ -0.58
LSM12YHR121W PCS60P38137 543 aaKnown RBP RIP-Chip data11.4□□□□□ -0.58not detected
LSM12YHR121W ARH1P48360 493 aa11.4□□□□□ -0.58
LSM12YHR121W MAK21Q12176 1025 aaKnown RBP11.4□□□□□ -0.58
LSM12YHR121W YDR090CQ03193 310 aa11.39□□□□□ -0.59
LSM12YHR121W MPC54Q08550 464 aa11.39□□□□□ -0.59
LSM12YHR121W RPP1BP10622 106 aaKnown RBP11.36□□□□□ -0.59
LSM12YHR121W DPL1Q05567 589 aa11.36□□□□□ -0.59
LSM12YHR121W HAP5Q02516 242 aa11.34□□□□□ -0.59
LSM12YHR121W YDR344CQ05510 147 aa11.34□□□□□ -0.59
LSM12YHR121W COX6P00427 148 aa11.32□□□□□ -0.6
LSM12YHR121W PBS2P08018 668 aa11.31□□□□□ -0.6
LSM12YHR121W NMA111P53920 997 aa11.3□□□□□ -0.6
LSM12YHR121W CDC73Q06697 393 aa11.29□□□□□ -0.6
LSM12YHR121W SPT23P35210 1082 aa11.28□□□□□ -0.6
LSM12YHR121W BNI4P53858 892 aa11.25□□□□□ -0.61
LSM12YHR121W ISU2Q12056 156 aa11.25□□□□□ -0.61
LSM12YHR121W SPB4P25808 606 aaPredicted RBP11.22□□□□□ -0.61
LSM12YHR121W BCK2P33306 851 aa11.22□□□□□ -0.61
LSM12YHR121W MAM3Q12296 706 aa11.2□□□□□ -0.62
LSM12YHR121W DSF2P38213 736 aa11.19□□□□□ -0.62
LSM12YHR121W PTC2P39966 464 aaKnown RBP11.19□□□□□ -0.62
LSM12YHR121W ORC6P38826 435 aa11.17□□□□□ -0.62
LSM12YHR121W PEX21P50091 288 aa11.17□□□□□ -0.62
LSM12YHR121W CSC1Q06538 782 aa11.17□□□□□ -0.62
LSM12YHR121W VRP1P37370 817 aa11.14□□□□□ -0.63
LSM12YHR121W TFB4Q12004 338 aa11.13□□□□□ -0.63
LSM12YHR121W GAP1P19145 602 aaPredicted RBP11.12□□□□□ -0.63
LSM12YHR121W YML082WQ04533 649 aaKnown RBP11.12□□□□□ -0.63
LSM12YHR121W IES2P40154 320 aa11.1□□□□□ -0.63
LSM12YHR121W YRR1Q12172 810 aa11.06□□□□□ -0.64
LSM12YHR121W TUM1Q08686 304 aaKnown RBP11.05□□□□□ -0.64
LSM12YHR121W PSE1P32337 1089 aaKnown RBP11.04□□□□□ -0.64
LSM12YHR121W MVP1P40959 511 aaKnown RBP11.04□□□□□ -0.64
LSM12YHR121W PDR1P12383 1068 aa11.03□□□□□ -0.64
LSM12YHR121W XDJ1P39102 459 aa11.02□□□□□ -0.65
LSM12YHR121W RAM1P22007 431 aa11.01□□□□□ -0.65
LSM12YHR121W RGR1P19263 1082 aa11□□□□□ -0.65
LSM12YHR121W NUP42P49686 430 aaKnown RBP10.99□□□□□ -0.65
LSM12YHR121W YPR015CQ12531 247 aa10.97□□□□□ -0.65
LSM12YHR121W YPR109WQ06104 294 aa10.96□□□□□ -0.65
LSM12YHR121W CLB5P30283 435 aa10.94□□□□□ -0.66
LSM12YHR121W NUD1P32336 851 aa10.93□□□□□ -0.66
LSM12YHR121W NPL4P33755 580 aa10.93□□□□□ -0.66
LSM12YHR121W DIT2P21595 489 aa10.92□□□□□ -0.66
LSM12YHR121W GYP1Q08484 637 aa10.9□□□□□ -0.66
LSM12YHR121W STR2P47164 639 aa10.86□□□□□ -0.67
LSM12YHR121W SAS4Q04003 481 aa10.86□□□□□ -0.67
LSM12YHR121W TEA1P47988 759 aa10.85□□□□□ -0.67
LSM12YHR121W ISM1P48526 1002 aa10.85□□□□□ -0.67
LSM12YHR121W YNR021WP53723 404 aaKnown RBP10.84□□□□□ -0.67
LSM12YHR121W BUD20Q08004 166 aaPredicted RBP10.84□□□□□ -0.67
LSM12YHR121W PRT1P06103 763 aaKnown RBP10.82□□□□□ -0.68
LSM12YHR121W LEU3P08638 886 aa10.81□□□□□ -0.68
LSM12YHR121W ATF2P53296 535 aa10.8□□□□□ -0.68
LSM12YHR121W GCD11P32481 527 aaKnown RBP10.78□□□□□ -0.68
LSM12YHR121W DPS1P04802 557 aaKnown RBP10.77□□□□□ -0.69
LSM12YHR121W GLC3P32775 704 aa10.76□□□□□ -0.69
LSM12YHR121W MRF1P30775 413 aaPredicted RBP10.74□□□□□ -0.69
LSM12YHR121W TY1A-DR4O74302 440 aa10.72□□□□□ -0.69
LSM12YHR121W TY1A-HP0C2I4 478 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms