RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W PTC4P38089 393 aa7.14□□□□□ -1.27
SSF1YHR066W YEL023CP39992 682 aa7.14□□□□□ -1.27
SSF1YHR066W YDR344CQ05510 147 aa7.14□□□□□ -1.27
SSF1YHR066W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
SSF1YHR066W VRP1P37370 817 aa7.13□□□□□ -1.27
SSF1YHR066W RCR1P38212 213 aa7.12□□□□□ -1.27
SSF1YHR066W SSP1P38871 571 aa7.12□□□□□ -1.27
SSF1YHR066W RGA2Q06407 1009 aa7.09□□□□□ -1.27
SSF1YHR066W DPS1P04802 557 aaKnown RBP7.06□□□□□ -1.28
SSF1YHR066W MGA2P40578 1113 aa7.06□□□□□ -1.28
SSF1YHR066W PML39Q03760 334 aa7.02□□□□□ -1.29
SSF1YHR066W ELP4Q02884 456 aaKnown RBP7.01□□□□□ -1.29
SSF1YHR066W SRC1Q03707 834 aa6.95□□□□□ -1.3
SSF1YHR066W ARH1P48360 493 aa6.95□□□□□ -1.3
SSF1YHR066W GRE2Q12068 342 aaKnown RBP6.92□□□□□ -1.3
SSF1YHR066W RGA1P39083 1007 aa6.91□□□□□ -1.3
SSF1YHR066W MID1P41821 548 aa6.9□□□□□ -1.31
SSF1YHR066W NST1P53935 1240 aa6.87□□□□□ -1.31
SSF1YHR066W SPT23P35210 1082 aa6.85□□□□□ -1.31
SSF1YHR066W GUT1P32190 709 aa6.82□□□□□ -1.32
SSF1YHR066W ATH1P48016 1211 aa6.82□□□□□ -1.32
SSF1YHR066W PTC3P34221 468 aaKnown RBP6.8□□□□□ -1.32
SSF1YHR066W EDS1P38073 919 aa6.8□□□□□ -1.32
SSF1YHR066W MIF2P35201 549 aa6.79□□□□□ -1.32
SSF1YHR066W SOL3P38858 249 aa6.79□□□□□ -1.32
SSF1YHR066W HAP5Q02516 242 aa6.78□□□□□ -1.32
SSF1YHR066W PEX29Q03370 554 aa6.78□□□□□ -1.32
SSF1YHR066W BNI4P53858 892 aa6.76□□□□□ -1.33
SSF1YHR066W YML082WQ04533 649 aaKnown RBP6.76□□□□□ -1.33
SSF1YHR066W MPH3P0CE00 602 aa6.75□□□□□ -1.33
SSF1YHR066W ILV3P39522 585 aaKnown RBP6.74□□□□□ -1.33
SSF1YHR066W AI4P03878 556 aa6.73□□□□□ -1.33
SSF1YHR066W MAK11P20484 414 aaKnown RBP6.72□□□□□ -1.33
SSF1YHR066W PTC2P39966 464 aaKnown RBP6.72□□□□□ -1.33
SSF1YHR066W RAS1P01119 309 aa6.69□□□□□ -1.34
SSF1YHR066W MPC54Q08550 464 aa6.68□□□□□ -1.34
SSF1YHR066W RAM2P29703 316 aa6.67□□□□□ -1.34
SSF1YHR066W COQ8P27697 501 aa6.64□□□□□ -1.35
SSF1YHR066W NMA111P53920 997 aa6.61□□□□□ -1.35
SSF1YHR066W YPR015CQ12531 247 aa6.61□□□□□ -1.35
SSF1YHR066W DMA1P38823 416 aa6.57□□□□□ -1.36
SSF1YHR066W YGR273CP53329 174 aa6.57□□□□□ -1.36
SSF1YHR066W RAM1P22007 431 aa6.57□□□□□ -1.36
SSF1YHR066W TRK1P12685 1235 aa6.56□□□□□ -1.36
SSF1YHR066W SLI15P38283 698 aa6.56□□□□□ -1.36
SSF1YHR066W DPL1Q05567 589 aa6.55□□□□□ -1.36
SSF1YHR066W AMS1P22855 1083 aa6.54□□□□□ -1.36
SSF1YHR066W RQC2Q12532 1038 aaKnown RBP6.52□□□□□ -1.37
SSF1YHR066W SDH2P21801 266 aa6.49□□□□□ -1.37
SSF1YHR066W YPL062WQ02781 134 aa6.47□□□□□ -1.37
SSF1YHR066W GYP1Q08484 637 aa6.47□□□□□ -1.37
SSF1YHR066W ISU2Q12056 156 aa6.46□□□□□ -1.37
SSF1YHR066W NOP53Q12080 455 aaKnown RBP6.45□□□□□ -1.38
SSF1YHR066W PDR1P12383 1068 aa6.4□□□□□ -1.39
SSF1YHR066W CDC73Q06697 393 aa6.4□□□□□ -1.39
SSF1YHR066W KEX1P09620 729 aa6.39□□□□□ -1.39
SSF1YHR066W SAS4Q04003 481 aa6.39□□□□□ -1.39
SSF1YHR066W SET1P38827 1080 aaKnown RBP6.37□□□□□ -1.39
SSF1YHR066W YEL077CQ3E7X8 1277 aa6.36□□□□□ -1.39
SSF1YHR066W BRE2P43132 505 aa6.29□□□□□ -1.4
SSF1YHR066W SAS10Q12136 610 aaPredicted RBP6.29□□□□□ -1.4
SSF1YHR066W YLR326WQ06170 240 aaKnown RBP6.28□□□□□ -1.4
SSF1YHR066W MRF1P30775 413 aaPredicted RBP6.27□□□□□ -1.41
SSF1YHR066W GAR1P28007 205 aaKnown RBP6.26□□□□□ -1.41
SSF1YHR066W AIR1P40507 360 aaKnown RBP6.26□□□□□ -1.41
SSF1YHR066W YPR148CQ06523 435 aa6.26□□□□□ -1.41
SSF1YHR066W UBP14P38237 781 aaKnown RBP6.25□□□□□ -1.41
SSF1YHR066W BUD20Q08004 166 aaPredicted RBP6.25□□□□□ -1.41
SSF1YHR066W PCS60P38137 543 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
SSF1YHR066W CLA4P48562 842 aa6.23□□□□□ -1.41
SSF1YHR066W IFH1P39520 1085 aa6.22□□□□□ -1.41
SSF1YHR066W PRT1P06103 763 aaKnown RBP6.21□□□□□ -1.41
SSF1YHR066W VHR2P40041 505 aa6.21□□□□□ -1.41
SSF1YHR066W CST6P40535 587 aa6.2□□□□□ -1.42
SSF1YHR066W VPS70P47161 811 aa6.2□□□□□ -1.42
SSF1YHR066W GBP2P25555 427 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42 RIP-Chip
SSF1YHR066W STR2P47164 639 aa6.19□□□□□ -1.42
SSF1YHR066W GCR2Q01722 534 aa6.19□□□□□ -1.42
SSF1YHR066W ERG12P07277 443 aa6.18□□□□□ -1.42
SSF1YHR066W RAD54P32863 898 aa6.18□□□□□ -1.42
SSF1YHR066W ISM1P48526 1002 aa6.17□□□□□ -1.42
SSF1YHR066W YRR1Q12172 810 aa6.16□□□□□ -1.42
SSF1YHR066W RPP1BP10622 106 aaKnown RBP6.15□□□□□ -1.43
SSF1YHR066W LAM6Q08001 693 aa6.14□□□□□ -1.43
SSF1YHR066W MET22P32179 357 aa6.12□□□□□ -1.43
SSF1YHR066W CKB1P43639 278 aa6.12□□□□□ -1.43
SSF1YHR066W GAP1P19145 602 aaPredicted RBP6.1□□□□□ -1.43
SSF1YHR066W NUD1P32336 851 aa6.1□□□□□ -1.43
SSF1YHR066W REF2P42073 533 aaPredicted RBP6.1□□□□□ -1.43
SSF1YHR066W CDC4P07834 779 aa6.09□□□□□ -1.43
SSF1YHR066W TY1A-DR4O74302 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-HP0C2I4 478 aaKnown RBP6.08□□□□□ -1.44
SSF1YHR066W TY1A-AP0CX57 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-PR1P0CX58 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-ORP0CX59 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-PR2P0CX60 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-DR5P0CX65 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-ER2P0CX66 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-GR3P0CX67 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-LR1P0CX68 440 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms