RNA–Protein interactions for RNA: YHR035W

NEL1, Transcript of Activator of Sar1p GTPase activity, yeastyeast

Gene NEL1, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEL1YHR035W VPS70P47161 811 aa6.85□□□□□ -1.31
NEL1YHR035W IOC2Q12072 812 aa6.85□□□□□ -1.31
NEL1YHR035W SIS1P25294 352 aaKnown RBP6.84□□□□□ -1.31
NEL1YHR035W LDB19Q12502 818 aa6.84□□□□□ -1.31
NEL1YHR035W YEL023CP39992 682 aa6.81□□□□□ -1.32
NEL1YHR035W SOL3P38858 249 aa6.79□□□□□ -1.32
NEL1YHR035W YGR273CP53329 174 aa6.78□□□□□ -1.32
NEL1YHR035W YNL035CP53962 389 aaKnown RBP6.78□□□□□ -1.32
NEL1YHR035W JIP4Q03361 876 aa6.78□□□□□ -1.32
NEL1YHR035W RTG1P32607 177 aa6.77□□□□□ -1.33
NEL1YHR035W PTC4P38089 393 aa6.77□□□□□ -1.33
NEL1YHR035W CKB1P43639 278 aa6.77□□□□□ -1.33
NEL1YHR035W NST1P53935 1240 aa6.76□□□□□ -1.33
NEL1YHR035W FKH1P40466 484 aa6.75□□□□□ -1.33
NEL1YHR035W DAN4P47179 1161 aa6.75□□□□□ -1.33
NEL1YHR035W SEC61P32915 480 aa6.73□□□□□ -1.33
NEL1YHR035W VHR2P40041 505 aa6.73□□□□□ -1.33
NEL1YHR035W REF2P42073 533 aaPredicted RBP6.73□□□□□ -1.33
NEL1YHR035W AI4P03878 556 aa6.72□□□□□ -1.33
NEL1YHR035W MPH3P0CE00 602 aa6.72□□□□□ -1.33
NEL1YHR035W NCR1Q12200 1170 aa6.71□□□□□ -1.34
NEL1YHR035W TFG1P41895 735 aaPredicted RBP6.7□□□□□ -1.34
NEL1YHR035W AIR2Q12476 344 aaKnown RBP6.7□□□□□ -1.34
NEL1YHR035W KEX1P09620 729 aa6.7□□□□□ -1.34
NEL1YHR035W UBP14P38237 781 aaKnown RBP6.7□□□□□ -1.34
NEL1YHR035W YLR326WQ06170 240 aaKnown RBP6.7□□□□□ -1.34
NEL1YHR035W ILV3P39522 585 aaKnown RBP6.69□□□□□ -1.34
NEL1YHR035W PBS2P08018 668 aa6.68□□□□□ -1.34
NEL1YHR035W SPB4P25808 606 aaPredicted RBP6.67□□□□□ -1.34
NEL1YHR035W PML39Q03760 334 aa6.66□□□□□ -1.34
NEL1YHR035W RAD54P32863 898 aa6.65□□□□□ -1.34
NEL1YHR035W KIC1P38692 1080 aa6.65□□□□□ -1.34
NEL1YHR035W YJL171CP46992 396 aa6.65□□□□□ -1.34
NEL1YHR035W YDR090CQ03193 310 aa6.65□□□□□ -1.34
NEL1YHR035W MAK21Q12176 1025 aaKnown RBP6.65□□□□□ -1.34
NEL1YHR035W PCS60P38137 543 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
NEL1YHR035W YDL129WQ07555 291 aa6.64□□□□□ -1.35
NEL1YHR035W COX6P00427 148 aa6.62□□□□□ -1.35
NEL1YHR035W SLI15P38283 698 aa6.62□□□□□ -1.35
NEL1YHR035W DSF2P38213 736 aa6.62□□□□□ -1.35
NEL1YHR035W MID1P41821 548 aa6.62□□□□□ -1.35
NEL1YHR035W BMT6Q12291 365 aa6.62□□□□□ -1.35
NEL1YHR035W SAP30P38429 201 aa6.61□□□□□ -1.35
NEL1YHR035W MAM3Q12296 706 aa6.6□□□□□ -1.35
NEL1YHR035W PEX29Q03370 554 aa6.59□□□□□ -1.35
NEL1YHR035W IES2P40154 320 aa6.56□□□□□ -1.36
NEL1YHR035W MPC54Q08550 464 aa6.55□□□□□ -1.36
NEL1YHR035W RPP1BP10622 106 aaKnown RBP6.54□□□□□ -1.36
NEL1YHR035W CDC73Q06697 393 aa6.53□□□□□ -1.36
NEL1YHR035W LEU3P08638 886 aa6.53□□□□□ -1.36
NEL1YHR035W DPL1Q05567 589 aa6.53□□□□□ -1.36
NEL1YHR035W ORC6P38826 435 aa6.51□□□□□ -1.37
NEL1YHR035W YDR344CQ05510 147 aa6.5□□□□□ -1.37
NEL1YHR035W ARH1P48360 493 aa6.49□□□□□ -1.37
NEL1YHR035W NUP42P49686 430 aaKnown RBP6.49□□□□□ -1.37
NEL1YHR035W ELP4Q02884 456 aaKnown RBP6.49□□□□□ -1.37
NEL1YHR035W NMA111P53920 997 aa6.49□□□□□ -1.37
NEL1YHR035W HAP5Q02516 242 aa6.48□□□□□ -1.37
NEL1YHR035W PRE3P38624 215 aa6.47□□□□□ -1.37
NEL1YHR035W DIT2P21595 489 aa6.47□□□□□ -1.37
NEL1YHR035W CSC1Q06538 782 aa6.47□□□□□ -1.37
NEL1YHR035W GAP1P19145 602 aaPredicted RBP6.46□□□□□ -1.38
NEL1YHR035W PEX21P50091 288 aa6.46□□□□□ -1.38
NEL1YHR035W ISU2Q12056 156 aa6.46□□□□□ -1.38
NEL1YHR035W CHL1P22516 861 aaPredicted RBP6.45□□□□□ -1.38
NEL1YHR035W PSE1P32337 1089 aaKnown RBP6.45□□□□□ -1.38
NEL1YHR035W MVP1P40959 511 aaKnown RBP6.43□□□□□ -1.38
NEL1YHR035W YNR021WP53723 404 aaKnown RBP6.43□□□□□ -1.38
NEL1YHR035W TFB4Q12004 338 aa6.43□□□□□ -1.38
NEL1YHR035W RGR1P19263 1082 aa6.42□□□□□ -1.38
NEL1YHR035W SPT23P35210 1082 aa6.42□□□□□ -1.38
NEL1YHR035W BNI4P53858 892 aa6.41□□□□□ -1.38
NEL1YHR035W GLC3P32775 704 aa6.41□□□□□ -1.38
NEL1YHR035W TUM1Q08686 304 aaKnown RBP6.41□□□□□ -1.38
NEL1YHR035W YRR1Q12172 810 aa6.41□□□□□ -1.38
NEL1YHR035W RPN1P38764 993 aaKnown RBP6.39□□□□□ -1.39
NEL1YHR035W YPR109WQ06104 294 aa6.39□□□□□ -1.39
NEL1YHR035W PTC2P39966 464 aaKnown RBP6.38□□□□□ -1.39
NEL1YHR035W ATF2P53296 535 aa6.38□□□□□ -1.39
NEL1YHR035W PDR1P12383 1068 aa6.36□□□□□ -1.39
NEL1YHR035W CLB5P30283 435 aa6.36□□□□□ -1.39
NEL1YHR035W TEA1P47988 759 aa6.36□□□□□ -1.39
NEL1YHR035W AIM7Q12156 149 aa6.34□□□□□ -1.39
NEL1YHR035W YML082WQ04533 649 aaKnown RBP6.33□□□□□ -1.4
NEL1YHR035W RAM1P22007 431 aa6.32□□□□□ -1.4
NEL1YHR035W NUD1P32336 851 aa6.32□□□□□ -1.4
NEL1YHR035W BCK2P33306 851 aa6.3□□□□□ -1.4
NEL1YHR035W NPL4P33755 580 aa6.3□□□□□ -1.4
NEL1YHR035W VRP1P37370 817 aa6.3□□□□□ -1.4
NEL1YHR035W LEO1P38439 464 aa6.3□□□□□ -1.4
NEL1YHR035W YPR015CQ12531 247 aa6.3□□□□□ -1.4
NEL1YHR035W KIN1P13185 1064 aa6.29□□□□□ -1.4
NEL1YHR035W STR2P47164 639 aa6.28□□□□□ -1.4
NEL1YHR035W NIS1P53939 407 aa6.28□□□□□ -1.4
NEL1YHR035W ISM1P48526 1002 aa6.27□□□□□ -1.41
NEL1YHR035W YMR196WQ04336 1088 aa6.26□□□□□ -1.41
NEL1YHR035W FPK1P53739 893 aa6.24□□□□□ -1.41
NEL1YHR035W BUD20Q08004 166 aaPredicted RBP6.24□□□□□ -1.41
NEL1YHR035W KEX2P13134 814 aa6.24□□□□□ -1.41
NEL1YHR035W GYP1Q08484 637 aa6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms