RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C SOL3P38858 249 aa8.09□□□□□ -1.11
RTA1YGR213C REF2P42073 533 aaPredicted RBP8.07□□□□□ -1.12
RTA1YGR213C ULI1P43604 169 aa8.07□□□□□ -1.12
RTA1YGR213C YGR273CP53329 174 aa8.07□□□□□ -1.12
RTA1YGR213C TRP5P00931 707 aaKnown RBP8.06□□□□□ -1.12
RTA1YGR213C NST1P53935 1240 aa8.06□□□□□ -1.12
RTA1YGR213C IOC2Q12072 812 aa8.04□□□□□ -1.12
RTA1YGR213C PBS2P08018 668 aa8.02□□□□□ -1.13
RTA1YGR213C LEU3P08638 886 aa8.02□□□□□ -1.13
RTA1YGR213C SPB4P25808 606 aaPredicted RBP8.02□□□□□ -1.13
RTA1YGR213C UBP14P38237 781 aaKnown RBP8.02□□□□□ -1.13
RTA1YGR213C DSF2P38213 736 aa8.01□□□□□ -1.13
RTA1YGR213C YEL023CP39992 682 aa8.01□□□□□ -1.13
RTA1YGR213C VHR2P40041 505 aa8□□□□□ -1.13
RTA1YGR213C YLR326WQ06170 240 aaKnown RBP8□□□□□ -1.13
RTA1YGR213C PTC4P38089 393 aa7.99□□□□□ -1.13
RTA1YGR213C JIP4Q03361 876 aa7.99□□□□□ -1.13
RTA1YGR213C MAK21Q12176 1025 aaKnown RBP7.99□□□□□ -1.13
RTA1YGR213C AI4P03878 556 aa7.98□□□□□ -1.13
RTA1YGR213C MPH3P0CE00 602 aa7.98□□□□□ -1.13
RTA1YGR213C KEX1P09620 729 aa7.97□□□□□ -1.13
RTA1YGR213C YDR090CQ03193 310 aa7.97□□□□□ -1.13
RTA1YGR213C COX6P00427 148 aa7.96□□□□□ -1.14
RTA1YGR213C ILV3P39522 585 aaKnown RBP7.96□□□□□ -1.14
RTA1YGR213C DAN4P47179 1161 aa7.96□□□□□ -1.14
RTA1YGR213C YNL035CP53962 389 aaKnown RBP7.96□□□□□ -1.14
RTA1YGR213C LDB19Q12502 818 aa7.96□□□□□ -1.14
RTA1YGR213C RTG1P32607 177 aa7.93□□□□□ -1.14
RTA1YGR213C PCS60P38137 543 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
RTA1YGR213C MAM3Q12296 706 aa7.92□□□□□ -1.14
RTA1YGR213C RAD54P32863 898 aa7.91□□□□□ -1.14
RTA1YGR213C SEC61P32915 480 aa7.91□□□□□ -1.14
RTA1YGR213C KIC1P38692 1080 aa7.88□□□□□ -1.15
RTA1YGR213C FKH1P40466 484 aa7.88□□□□□ -1.15
RTA1YGR213C IES2P40154 320 aa7.87□□□□□ -1.15
RTA1YGR213C SLI15P38283 698 aa7.86□□□□□ -1.15
RTA1YGR213C NUP42P49686 430 aaKnown RBP7.85□□□□□ -1.15
RTA1YGR213C NCR1Q12200 1170 aa7.85□□□□□ -1.15
RTA1YGR213C SIS1P25294 352 aaKnown RBP7.84□□□□□ -1.15
RTA1YGR213C LEO1P38439 464 aa7.84□□□□□ -1.15
RTA1YGR213C AIR2Q12476 344 aaKnown RBP7.83□□□□□ -1.16
RTA1YGR213C PML39Q03760 334 aa7.82□□□□□ -1.16
RTA1YGR213C DIT2P21595 489 aa7.81□□□□□ -1.16
RTA1YGR213C RPN1P38764 993 aaKnown RBP7.81□□□□□ -1.16
RTA1YGR213C TFG1P41895 735 aaPredicted RBP7.81□□□□□ -1.16
RTA1YGR213C YNR021WP53723 404 aaKnown RBP7.81□□□□□ -1.16
RTA1YGR213C MID1P41821 548 aa7.8□□□□□ -1.16
RTA1YGR213C ORC6P38826 435 aa7.79□□□□□ -1.16
RTA1YGR213C YDL129WQ07555 291 aa7.79□□□□□ -1.16
RTA1YGR213C GAP1P19145 602 aaPredicted RBP7.75□□□□□ -1.17
RTA1YGR213C PSE1P32337 1089 aaKnown RBP7.75□□□□□ -1.17
RTA1YGR213C CDC73Q06697 393 aa7.75□□□□□ -1.17
RTA1YGR213C RPP1BP10622 106 aaKnown RBP7.74□□□□□ -1.17
RTA1YGR213C MPC54Q08550 464 aa7.74□□□□□ -1.17
RTA1YGR213C DPL1Q05567 589 aa7.73□□□□□ -1.17
RTA1YGR213C GLC3P32775 704 aa7.72□□□□□ -1.17
RTA1YGR213C CSC1Q06538 782 aa7.72□□□□□ -1.17
RTA1YGR213C SAP30P38429 201 aa7.71□□□□□ -1.18
RTA1YGR213C PEX29Q03370 554 aa7.71□□□□□ -1.18
RTA1YGR213C AIM7Q12156 149 aa7.71□□□□□ -1.18
RTA1YGR213C RGR1P19263 1082 aa7.69□□□□□ -1.18
RTA1YGR213C MVP1P40959 511 aaKnown RBP7.69□□□□□ -1.18
RTA1YGR213C TFB4Q12004 338 aa7.68□□□□□ -1.18
RTA1YGR213C BMT6Q12291 365 aa7.68□□□□□ -1.18
RTA1YGR213C YJL171CP46992 396 aa7.67□□□□□ -1.18
RTA1YGR213C NMA111P53920 997 aa7.67□□□□□ -1.18
RTA1YGR213C ISU2Q12056 156 aa7.67□□□□□ -1.18
RTA1YGR213C ARH1P48360 493 aa7.66□□□□□ -1.18
RTA1YGR213C ATF2P53296 535 aa7.66□□□□□ -1.18
RTA1YGR213C YDR344CQ05510 147 aa7.65□□□□□ -1.18
RTA1YGR213C KIN1P13185 1064 aa7.64□□□□□ -1.19
RTA1YGR213C PEX21P50091 288 aa7.64□□□□□ -1.19
RTA1YGR213C HAP5Q02516 242 aa7.63□□□□□ -1.19
RTA1YGR213C CLB5P30283 435 aa7.62□□□□□ -1.19
RTA1YGR213C YPR109WQ06104 294 aa7.62□□□□□ -1.19
RTA1YGR213C TUM1Q08686 304 aaKnown RBP7.61□□□□□ -1.19
RTA1YGR213C TEA1P47988 759 aa7.6□□□□□ -1.19
RTA1YGR213C ELP4Q02884 456 aaKnown RBP7.59□□□□□ -1.19
RTA1YGR213C PRE3P38624 215 aa7.58□□□□□ -1.2
RTA1YGR213C BNI4P53858 892 aa7.58□□□□□ -1.2
RTA1YGR213C YRR1Q12172 810 aa7.58□□□□□ -1.2
RTA1YGR213C SPT23P35210 1082 aa7.56□□□□□ -1.2
RTA1YGR213C CHL1P22516 861 aaPredicted RBP7.55□□□□□ -1.2
RTA1YGR213C PDR1P12383 1068 aa7.54□□□□□ -1.2
RTA1YGR213C NIS1P53939 407 aa7.52□□□□□ -1.21
RTA1YGR213C RAM1P22007 431 aa7.51□□□□□ -1.21
RTA1YGR213C SIT4P20604 311 aa7.5□□□□□ -1.21
RTA1YGR213C NUD1P32336 851 aa7.5□□□□□ -1.21
RTA1YGR213C PTC2P39966 464 aaKnown RBP7.5□□□□□ -1.21
RTA1YGR213C FPK1P53739 893 aa7.49□□□□□ -1.21
RTA1YGR213C YML082WQ04533 649 aaKnown RBP7.49□□□□□ -1.21
RTA1YGR213C GUA1P38625 525 aaKnown RBP7.48□□□□□ -1.21
RTA1YGR213C HST2P53686 357 aa7.47□□□□□ -1.21
RTA1YGR213C CSN12P47130 423 aa7.46□□□□□ -1.22
RTA1YGR213C STR2P47164 639 aa7.46□□□□□ -1.22
RTA1YGR213C YMR196WQ04336 1088 aa7.46□□□□□ -1.22
RTA1YGR213C YPR015CQ12531 247 aa7.46□□□□□ -1.22
RTA1YGR213C KTR1P27810 393 aaKnown RBP7.45□□□□□ -1.22
RTA1YGR213C ISM1P48526 1002 aa7.45□□□□□ -1.22
RTA1YGR213C NPL4P33755 580 aa7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms