RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeastyeast

Gene SKI6, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI6YGR195W YDR344CQ05510 147 aa11.22□□□□□ -0.61
SKI6YGR195W PTC4P38089 393 aa11.19□□□□□ -0.62
SKI6YGR195W ABP1P15891 592 aaKnown RBP11.18□□□□□ -0.62
SKI6YGR195W BCK2P33306 851 aa11.18□□□□□ -0.62
SKI6YGR195W CHL1P22516 861 aaPredicted RBP11.16□□□□□ -0.62
SKI6YGR195W PRE3P38624 215 aa11.15□□□□□ -0.62
SKI6YGR195W MIF2P35201 549 aa11.09□□□□□ -0.63
SKI6YGR195W PML39Q03760 334 aa11.08□□□□□ -0.64
SKI6YGR195W GRE2Q12068 342 aaKnown RBP11.08□□□□□ -0.64
SKI6YGR195W EDS1P38073 919 aa11.04□□□□□ -0.64
SKI6YGR195W RAM2P29703 316 aa11.01□□□□□ -0.65
SKI6YGR195W VRP1P37370 817 aa10.99□□□□□ -0.65
SKI6YGR195W PTC3P34221 468 aaKnown RBP10.97□□□□□ -0.65
SKI6YGR195W MID1P41821 548 aa10.97□□□□□ -0.65
SKI6YGR195W ATH1P48016 1211 aa10.97□□□□□ -0.65
SKI6YGR195W ELP4Q02884 456 aaKnown RBP10.97□□□□□ -0.65
SKI6YGR195W MAK11P20484 414 aaKnown RBP10.94□□□□□ -0.66
SKI6YGR195W GUT1P32190 709 aa10.9□□□□□ -0.66
SKI6YGR195W NST1P53935 1240 aa10.9□□□□□ -0.66
SKI6YGR195W SOL3P38858 249 aa10.88□□□□□ -0.67
SKI6YGR195W COQ8P27697 501 aa10.85□□□□□ -0.67
SKI6YGR195W XDJ1P39102 459 aa10.85□□□□□ -0.67
SKI6YGR195W ILV3P39522 585 aaKnown RBP10.81□□□□□ -0.68
SKI6YGR195W ARH1P48360 493 aa10.8□□□□□ -0.68
SKI6YGR195W PEX29Q03370 554 aa10.77□□□□□ -0.69
SKI6YGR195W DPS1P04802 557 aaKnown RBP10.74□□□□□ -0.69
SKI6YGR195W MPH3P0CE00 602 aa10.72□□□□□ -0.69
SKI6YGR195W AI4P03878 556 aa10.69□□□□□ -0.7
SKI6YGR195W SPT23P35210 1082 aa10.67□□□□□ -0.7
SKI6YGR195W HAP5Q02516 242 aa10.64□□□□□ -0.71
SKI6YGR195W YGR273CP53329 174 aa10.62□□□□□ -0.71
SKI6YGR195W MPC54Q08550 464 aa10.61□□□□□ -0.71
SKI6YGR195W PTC2P39966 464 aaKnown RBP10.54□□□□□ -0.72
SKI6YGR195W BNI4P53858 892 aa10.54□□□□□ -0.72
SKI6YGR195W SRC1Q03707 834 aa10.54□□□□□ -0.72
SKI6YGR195W SLI15P38283 698 aa10.53□□□□□ -0.72
SKI6YGR195W NMA111P53920 997 aa10.53□□□□□ -0.72
SKI6YGR195W YML082WQ04533 649 aaKnown RBP10.48□□□□□ -0.73
SKI6YGR195W YPR015CQ12531 247 aa10.45□□□□□ -0.74
SKI6YGR195W DPL1Q05567 589 aa10.43□□□□□ -0.74
SKI6YGR195W RAS1P01119 309 aa10.41□□□□□ -0.74
SKI6YGR195W NOP53Q12080 455 aaKnown RBP10.39□□□□□ -0.75
SKI6YGR195W KEX1P09620 729 aa10.38□□□□□ -0.75
SKI6YGR195W CDC73Q06697 393 aa10.37□□□□□ -0.75
SKI6YGR195W RAM1P22007 431 aa10.33□□□□□ -0.76
SKI6YGR195W PDR1P12383 1068 aa10.31□□□□□ -0.76
SKI6YGR195W VHR2P40041 505 aa10.28□□□□□ -0.76
SKI6YGR195W ISU2Q12056 156 aa10.27□□□□□ -0.77
SKI6YGR195W YLR326WQ06170 240 aaKnown RBP10.26□□□□□ -0.77
SKI6YGR195W GYP1Q08484 637 aa10.24□□□□□ -0.77
SKI6YGR195W UBP14P38237 781 aaKnown RBP10.23□□□□□ -0.77
SKI6YGR195W SET1P38827 1080 aaKnown RBP10.23□□□□□ -0.77
SKI6YGR195W PCS60P38137 543 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
SKI6YGR195W SDH2P21801 266 aa10.18□□□□□ -0.78
SKI6YGR195W AMS1P22855 1083 aa10.13□□□□□ -0.79
SKI6YGR195W RQC2Q12532 1038 aaKnown RBP10.13□□□□□ -0.79
SKI6YGR195W RAD54P32863 898 aa10.11□□□□□ -0.79
SKI6YGR195W RGA2Q06407 1009 aa10.11□□□□□ -0.79
SKI6YGR195W RGA1P39083 1007 aa10.08□□□□□ -0.8
SKI6YGR195W TRK1P12685 1235 aa10.06□□□□□ -0.8
SKI6YGR195W YDR090CQ03193 310 aa10.02□□□□□ -0.81
SKI6YGR195W BUD20Q08004 166 aaPredicted RBP10.01□□□□□ -0.81
SKI6YGR195W YRR1Q12172 810 aa10.01□□□□□ -0.81
SKI6YGR195W SAS4Q04003 481 aa9.98□□□□□ -0.81
SKI6YGR195W STR2P47164 639 aa9.96□□□□□ -0.82
SKI6YGR195W ISM1P48526 1002 aa9.94□□□□□ -0.82
SKI6YGR195W YEL077CQ3E7X8 1277 aa9.93□□□□□ -0.82
SKI6YGR195W RPP1BP10622 106 aaKnown RBP9.92□□□□□ -0.82
SKI6YGR195W PEX21P50091 288 aa9.92□□□□□ -0.82
SKI6YGR195W PRT1P06103 763 aaKnown RBP9.9□□□□□ -0.82
SKI6YGR195W KIC1P38692 1080 aa9.9□□□□□ -0.82
SKI6YGR195W TUM1Q08686 304 aaKnown RBP9.9□□□□□ -0.82
SKI6YGR195W AIR1P40507 360 aaKnown RBP9.88□□□□□ -0.83
SKI6YGR195W CLA4P48562 842 aa9.88□□□□□ -0.83
SKI6YGR195W NUD1P32336 851 aa9.87□□□□□ -0.83
SKI6YGR195W GAP1P19145 602 aaPredicted RBP9.85□□□□□ -0.83
SKI6YGR195W CST6P40535 587 aa9.85□□□□□ -0.83
SKI6YGR195W MRF1P30775 413 aaPredicted RBP9.83□□□□□ -0.84
SKI6YGR195W TY1A-DR4O74302 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-HP0C2I4 478 aaKnown RBP9.8□□□□□ -0.84
SKI6YGR195W TY1A-AP0CX57 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-PR1P0CX58 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-ORP0CX59 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-PR2P0CX60 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-DR5P0CX65 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-ER2P0CX66 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-GR3P0CX67 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-LR1P0CX68 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-MR2P0CX69 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-JR2P47099 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-DR1Q03856 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-ML1Q04706 440 aaKnown RBP9.8□□□□□ -0.84
SKI6YGR195W TY1A-BRQ12217 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-NL2Q12470 440 aa9.8□□□□□ -0.84
SKI6YGR195W TY1A-GR2Q12485 440 aa9.8□□□□□ -0.84
SKI6YGR195W ERG12P07277 443 aa9.79□□□□□ -0.84
SKI6YGR195W GCD11P32481 527 aaKnown RBP9.78□□□□□ -0.84
SKI6YGR195W ORC6P38826 435 aa9.78□□□□□ -0.84
SKI6YGR195W REF2P42073 533 aaPredicted RBP9.78□□□□□ -0.84
SKI6YGR195W CSC1Q06538 782 aa9.78□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms