RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C PTC4P38089 393 aa8.78□□□□□ -1
SRB5YGR104C YEL023CP39992 682 aa8.77□□□□□ -1.01
SRB5YGR104C MAK11P20484 414 aaKnown RBP8.74□□□□□ -1.01
SRB5YGR104C CHL1P22516 861 aaPredicted RBP8.72□□□□□ -1.01
SRB5YGR104C GRE2Q12068 342 aaKnown RBP8.72□□□□□ -1.01
SRB5YGR104C BCK2P33306 851 aa8.68□□□□□ -1.02
SRB5YGR104C MIF2P35201 549 aa8.68□□□□□ -1.02
SRB5YGR104C PRE3P38624 215 aa8.68□□□□□ -1.02
SRB5YGR104C RAM2P29703 316 aa8.67□□□□□ -1.02
SRB5YGR104C ATH1P48016 1211 aa8.66□□□□□ -1.02
SRB5YGR104C GUT1P32190 709 aa8.62□□□□□ -1.03
SRB5YGR104C PTC3P34221 468 aaKnown RBP8.61□□□□□ -1.03
SRB5YGR104C NOP53Q12080 455 aaKnown RBP8.61□□□□□ -1.03
SRB5YGR104C PML39Q03760 334 aa8.6□□□□□ -1.03
SRB5YGR104C EDS1P38073 919 aa8.57□□□□□ -1.04
SRB5YGR104C COQ8P27697 501 aa8.56□□□□□ -1.04
SRB5YGR104C ELP4Q02884 456 aaKnown RBP8.55□□□□□ -1.04
SRB5YGR104C VRP1P37370 817 aa8.5□□□□□ -1.05
SRB5YGR104C XDJ1P39102 459 aa8.48□□□□□ -1.05
SRB5YGR104C PEX29Q03370 554 aa8.47□□□□□ -1.05
SRB5YGR104C ARH1P48360 493 aa8.46□□□□□ -1.06
SRB5YGR104C AI4P03878 556 aa8.45□□□□□ -1.06
SRB5YGR104C MPH3P0CE00 602 aa8.45□□□□□ -1.06
SRB5YGR104C MID1P41821 548 aa8.45□□□□□ -1.06
SRB5YGR104C NST1P53935 1240 aa8.45□□□□□ -1.06
SRB5YGR104C YDR344CQ05510 147 aa8.44□□□□□ -1.06
SRB5YGR104C SOL3P38858 249 aa8.43□□□□□ -1.06
SRB5YGR104C SPT23P35210 1082 aa8.4□□□□□ -1.06
SRB5YGR104C HAP5Q02516 242 aa8.36□□□□□ -1.07
SRB5YGR104C SET1P38827 1080 aaKnown RBP8.35□□□□□ -1.07
SRB5YGR104C YGR273CP53329 174 aa8.35□□□□□ -1.07
SRB5YGR104C IFH1P39520 1085 aa8.32□□□□□ -1.08
SRB5YGR104C DPS1P04802 557 aaKnown RBP8.31□□□□□ -1.08
SRB5YGR104C ILV3P39522 585 aaKnown RBP8.31□□□□□ -1.08
SRB5YGR104C BNI4P53858 892 aa8.3□□□□□ -1.08
SRB5YGR104C PTC2P39966 464 aaKnown RBP8.29□□□□□ -1.08
SRB5YGR104C MPC54Q08550 464 aa8.28□□□□□ -1.08
SRB5YGR104C YML082WQ04533 649 aaKnown RBP8.26□□□□□ -1.09
SRB5YGR104C SLI15P38283 698 aa8.24□□□□□ -1.09
SRB5YGR104C NMA111P53920 997 aa8.23□□□□□ -1.09
SRB5YGR104C DPL1Q05567 589 aa8.23□□□□□ -1.09
SRB5YGR104C KEX1P09620 729 aa8.17□□□□□ -1.1
SRB5YGR104C RPP1BP10622 106 aaKnown RBP8.14□□□□□ -1.11
SRB5YGR104C YPR148CQ06523 435 aa8.14□□□□□ -1.11
SRB5YGR104C ISU2Q12056 156 aa8.14□□□□□ -1.11
SRB5YGR104C UBP14P38237 781 aaKnown RBP8.11□□□□□ -1.11
SRB5YGR104C YLR326WQ06170 240 aaKnown RBP8.11□□□□□ -1.11
SRB5YGR104C RAD54P32863 898 aa8.09□□□□□ -1.11
SRB5YGR104C VHR2P40041 505 aa8.08□□□□□ -1.12
SRB5YGR104C KIC1P38692 1080 aa8.06□□□□□ -1.12
SRB5YGR104C REF2P42073 533 aaPredicted RBP8.06□□□□□ -1.12
SRB5YGR104C CDC73Q06697 393 aa8.06□□□□□ -1.12
SRB5YGR104C GYP1Q08484 637 aa8.05□□□□□ -1.12
SRB5YGR104C MAK21Q12176 1025 aaKnown RBP8.04□□□□□ -1.12
SRB5YGR104C PCS60P38137 543 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
SRB5YGR104C YPR015CQ12531 247 aa8.03□□□□□ -1.12
SRB5YGR104C RAM1P22007 431 aa8.02□□□□□ -1.13
SRB5YGR104C SRC1Q03707 834 aa8.01□□□□□ -1.13
SRB5YGR104C VPS70P47161 811 aa8□□□□□ -1.13
SRB5YGR104C CKB1P43639 278 aa7.99□□□□□ -1.13
SRB5YGR104C YDR090CQ03193 310 aa7.98□□□□□ -1.13
SRB5YGR104C SAS4Q04003 481 aa7.98□□□□□ -1.13
SRB5YGR104C RAS1P01119 309 aa7.97□□□□□ -1.13
SRB5YGR104C COX6P00427 148 aa7.95□□□□□ -1.14
SRB5YGR104C PDR1P12383 1068 aa7.95□□□□□ -1.14
SRB5YGR104C AMS1P22855 1083 aa7.94□□□□□ -1.14
SRB5YGR104C CSC1Q06538 782 aa7.94□□□□□ -1.14
SRB5YGR104C PEX21P50091 288 aa7.93□□□□□ -1.14
SRB5YGR104C TFB4Q12004 338 aa7.92□□□□□ -1.14
SRB5YGR104C MRF1P30775 413 aaPredicted RBP7.9□□□□□ -1.14
SRB5YGR104C DMA1P38823 416 aa7.9□□□□□ -1.14
SRB5YGR104C YEL077CQ3E7X8 1277 aa7.9□□□□□ -1.14
SRB5YGR104C GAP1P19145 602 aaPredicted RBP7.89□□□□□ -1.15
SRB5YGR104C SAS10Q12136 610 aaPredicted RBP7.88□□□□□ -1.15
SRB5YGR104C TRK1P12685 1235 aa7.86□□□□□ -1.15
SRB5YGR104C YRR1Q12172 810 aa7.86□□□□□ -1.15
SRB5YGR104C ORC6P38826 435 aa7.84□□□□□ -1.15
SRB5YGR104C PRT1P06103 763 aaKnown RBP7.83□□□□□ -1.16
SRB5YGR104C PBS2P08018 668 aa7.83□□□□□ -1.16
SRB5YGR104C RQC2Q12532 1038 aaKnown RBP7.82□□□□□ -1.16
SRB5YGR104C SDH2P21801 266 aa7.81□□□□□ -1.16
SRB5YGR104C BUD20Q08004 166 aaPredicted RBP7.81□□□□□ -1.16
SRB5YGR104C NPL4P33755 580 aa7.8□□□□□ -1.16
SRB5YGR104C TUM1Q08686 304 aaKnown RBP7.8□□□□□ -1.16
SRB5YGR104C ERG12P07277 443 aa7.78□□□□□ -1.16
SRB5YGR104C NUD1P32336 851 aa7.78□□□□□ -1.16
SRB5YGR104C MVP1P40959 511 aaKnown RBP7.78□□□□□ -1.16
SRB5YGR104C STR2P47164 639 aa7.77□□□□□ -1.17
SRB5YGR104C ISM1P48526 1002 aa7.76□□□□□ -1.17
SRB5YGR104C MAM3Q12296 706 aa7.76□□□□□ -1.17
SRB5YGR104C PSE1P32337 1089 aaKnown RBP7.75□□□□□ -1.17
SRB5YGR104C DSF2P38213 736 aa7.75□□□□□ -1.17
SRB5YGR104C RGR1P19263 1082 aa7.74□□□□□ -1.17
SRB5YGR104C RGA1P39083 1007 aa7.74□□□□□ -1.17
SRB5YGR104C CLB5P30283 435 aa7.73□□□□□ -1.17
SRB5YGR104C GCD11P32481 527 aaKnown RBP7.71□□□□□ -1.18
SRB5YGR104C SPT16P32558 1035 aaKnown RBP7.71□□□□□ -1.18
SRB5YGR104C YPR109WQ06104 294 aa7.71□□□□□ -1.18
SRB5YGR104C SPB4P25808 606 aaPredicted RBP7.69□□□□□ -1.18
SRB5YGR104C RGA2Q06407 1009 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms