RNA–Protein interactions for RNA: YFR009W

GCN20, Transcript of Positive regulator of the Gcn2p kinase activity, yeastyeast

Gene GCN20, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCN20YFR009W TY1B-MR2Q04670 1755 aaKnown RBP6.8□□□□□ -1.32
GCN20YFR009W TY1B-LR1Q12088 1755 aaKnown RBP6.8□□□□□ -1.32
GCN20YFR009W TY1B-NL1Q12112 1755 aa6.8□□□□□ -1.32
GCN20YFR009W TY1B-GR1Q12141 1755 aa6.8□□□□□ -1.32
GCN20YFR009W TY1B-BLQ12490 1755 aa6.8□□□□□ -1.32
GCN20YFR009W TY3B-GQ99315 1547 aa6.8□□□□□ -1.32
GCN20YFR009W GEA2P39993 1459 aaKnown RBP6.79□□□□□ -1.32
GCN20YFR009W CAT8P39113 1433 aa6.78□□□□□ -1.32
GCN20YFR009W ESC1Q03661 1658 aaKnown RBP6.77□□□□□ -1.32
GCN20YFR009W RTT106P40161 455 aa6.76□□□□□ -1.33
GCN20YFR009W IRC20Q06554 1556 aa6.76□□□□□ -1.33
GCN20YFR009W VPS15P22219 1454 aa6.76□□□□□ -1.33
GCN20YFR009W YBT1P32386 1661 aa6.76□□□□□ -1.33
GCN20YFR009W NTE1Q04958 1679 aa6.76□□□□□ -1.33
GCN20YFR009W RPO21P04050 1733 aaKnown RBP6.74□□□□□ -1.33
GCN20YFR009W RPA190P10964 1664 aaKnown RBP6.74□□□□□ -1.33
GCN20YFR009W DNF1P32660 1571 aa6.71□□□□□ -1.34
GCN20YFR009W SRB8P25648 1427 aa6.69□□□□□ -1.34
GCN20YFR009W PDR10P51533 1564 aa6.69□□□□□ -1.34
GCN20YFR009W NUP159P40477 1460 aa6.68□□□□□ -1.34
GCN20YFR009W POL5P39985 1022 aaKnown RBP6.68□□□□□ -1.34
GCN20YFR009W PDR12Q02785 1511 aa6.67□□□□□ -1.34
GCN20YFR009W ARO1P08566 1588 aaKnown RBP6.66□□□□□ -1.34
GCN20YFR009W GCN2P15442 1659 aa6.65□□□□□ -1.35
GCN20YFR009W MET10P39692 1035 aa6.64□□□□□ -1.35
GCN20YFR009W GDB1Q06625 1536 aa6.64□□□□□ -1.35
GCN20YFR009W MMS1Q06211 1407 aa6.62□□□□□ -1.35
GCN20YFR009W NSR1P27476 414 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
GCN20YFR009W NUP157P40064 1391 aaKnown RBP6.61□□□□□ -1.35
GCN20YFR009W SPO14P36126 1683 aa6.61□□□□□ -1.35
GCN20YFR009W CKB1P43639 278 aa6.61□□□□□ -1.35
GCN20YFR009W MET5P47169 1442 aa6.6□□□□□ -1.35
GCN20YFR009W IQG1Q12280 1495 aa6.6□□□□□ -1.35
GCN20YFR009W SEC3P33332 1336 aaKnown RBP6.6□□□□□ -1.35
GCN20YFR009W BUD21Q08492 214 aaPredicted RBP6.59□□□□□ -1.36
GCN20YFR009W YRF1-1P0CX20 1796 aa6.57□□□□□ -1.36
GCN20YFR009W YRF1-5P0CX21 1796 aa6.57□□□□□ -1.36
GCN20YFR009W YRF1-8P0CX22 1796 aa6.57□□□□□ -1.36
GCN20YFR009W PDR5P33302 1511 aaKnown RBP6.57□□□□□ -1.36
GCN20YFR009W ENP1P38333 483 aaKnown RBP6.57□□□□□ -1.36
GCN20YFR009W NOP7P53261 605 aaKnown RBP6.57□□□□□ -1.36
GCN20YFR009W YSP2Q06681 1438 aa6.56□□□□□ -1.36
GCN20YFR009W BUD3P25558 1636 aa6.56□□□□□ -1.36
GCN20YFR009W NOP2P40991 618 aaKnown RBP6.53□□□□□ -1.36
GCN20YFR009W PAF1P38351 445 aa6.53□□□□□ -1.36
GCN20YFR009W YOR093CQ12275 1648 aa6.5□□□□□ -1.37
GCN20YFR009W BNR1P40450 1375 aa6.49□□□□□ -1.37
GCN20YFR009W SPT7P35177 1332 aa6.49□□□□□ -1.37
GCN20YFR009W BFR2Q06631 534 aaKnown RBP6.48□□□□□ -1.37
GCN20YFR009W CHC1P22137 1653 aaKnown RBP6.47□□□□□ -1.37
GCN20YFR009W MHP1P43638 1398 aa6.47□□□□□ -1.37
GCN20YFR009W SEC7P11075 2009 aaKnown RBP6.46□□□□□ -1.37
GCN20YFR009W LTE1P07866 1435 aa6.46□□□□□ -1.38
GCN20YFR009W RAV1P47104 1357 aa6.44□□□□□ -1.38
GCN20YFR009W TRM3Q07527 1436 aa6.44□□□□□ -1.38
GCN20YFR009W TY3B-IQ7LHG5 1498 aaKnown RBP6.44□□□□□ -1.38
GCN20YFR009W RTC1Q08281 1341 aa6.42□□□□□ -1.38
GCN20YFR009W SCT1P32784 759 aa6.42□□□□□ -1.38
GCN20YFR009W DOP1Q03921 1698 aa6.41□□□□□ -1.38
GCN20YFR009W NUP188P52593 1655 aaKnown RBP6.39□□□□□ -1.39
GCN20YFR009W VMR1P38735 1592 aa6.38□□□□□ -1.39
GCN20YFR009W IML1P47170 1584 aa6.38□□□□□ -1.39
GCN20YFR009W YLR419WQ06698 1435 aaKnown RBP6.38□□□□□ -1.39
GCN20YFR009W ESL2P36168 1195 aa6.38□□□□□ -1.39
GCN20YFR009W PDR11P40550 1411 aa6.37□□□□□ -1.39
GCN20YFR009W PSD2P53037 1138 aaKnown RBP6.36□□□□□ -1.39
GCN20YFR009W DRS2P39524 1355 aa6.36□□□□□ -1.39
GCN20YFR009W PRS1P32895 427 aaKnown RBP6.36□□□□□ -1.39
GCN20YFR009W ORC1P54784 914 aaPredicted RBP6.36□□□□□ -1.39
GCN20YFR009W TAF5P38129 798 aa6.34□□□□□ -1.39
GCN20YFR009W PDS5Q04264 1277 aa6.34□□□□□ -1.39
GCN20YFR009W DNF2Q12675 1612 aa6.34□□□□□ -1.39
GCN20YFR009W LEU3P08638 886 aa6.33□□□□□ -1.4
GCN20YFR009W KIP3P53086 805 aaKnown RBP6.32□□□□□ -1.4
GCN20YFR009W URN1Q06525 465 aaKnown RBP6.32□□□□□ -1.4
GCN20YFR009W NUP192P47054 1683 aa6.31□□□□□ -1.4
GCN20YFR009W SPE2P21182 396 aa6.27□□□□□ -1.41
GCN20YFR009W IPL1P38991 367 aa6.27□□□□□ -1.41
GCN20YFR009W TFA1P36100 482 aa6.26□□□□□ -1.41
GCN20YFR009W RPP0P05317 312 aaKnown RBP6.25□□□□□ -1.41
GCN20YFR009W BCK1Q01389 1478 aa6.24□□□□□ -1.41
GCN20YFR009W NAP1P25293 417 aaKnown RBP6.24□□□□□ -1.41
GCN20YFR009W IOC4Q04213 475 aa6.24□□□□□ -1.41
GCN20YFR009W HAP1P0CE41 1502 aa6.24□□□□□ -1.41
GCN20YFR009W ALD4P46367 519 aaKnown RBP6.24□□□□□ -1.41
GCN20YFR009W TYS1P36421 394 aaKnown RBP6.23□□□□□ -1.41
GCN20YFR009W MLP1Q02455 1875 aaKnown RBP6.22□□□□□ -1.41
GCN20YFR009W TAF8Q03750 510 aa6.22□□□□□ -1.41
GCN20YFR009W YAP3P38749 330 aa6.21□□□□□ -1.42
GCN20YFR009W NST1P53935 1240 aa6.21□□□□□ -1.42
GCN20YFR009W ITT1Q04638 464 aa6.21□□□□□ -1.42
GCN20YFR009W CDC45Q08032 650 aa6.21□□□□□ -1.42
GCN20YFR009W BNI1P41832 1953 aa6.21□□□□□ -1.42
GCN20YFR009W FKH1P40466 484 aa6.2□□□□□ -1.42
GCN20YFR009W VPS27P40343 622 aaKnown RBP6.2□□□□□ -1.42
GCN20YFR009W RAD9P14737 1309 aa6.2□□□□□ -1.42
GCN20YFR009W RTG3P38165 486 aa6.19□□□□□ -1.42
GCN20YFR009W CHZ1P40019 153 aaPredicted RBP6.19□□□□□ -1.42
GCN20YFR009W YRB30P53107 440 aaPredicted RBP6.18□□□□□ -1.42
GCN20YFR009W CAB1Q04430 367 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms