RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C TY1B-MR2Q04670 1755 aaKnown RBP16.9■□□□□ 0.3
SCC4YER147C TY1B-LR1Q12088 1755 aaKnown RBP16.9■□□□□ 0.3
SCC4YER147C TY1B-NL1Q12112 1755 aa16.9■□□□□ 0.3
SCC4YER147C TY1B-GR1Q12141 1755 aa16.9■□□□□ 0.3
SCC4YER147C TY1B-BLQ12490 1755 aa16.9■□□□□ 0.3
SCC4YER147C ESC1Q03661 1658 aaKnown RBP16.86■□□□□ 0.29
SCC4YER147C VPS15P22219 1454 aa16.79■□□□□ 0.28
SCC4YER147C RTT106P40161 455 aa16.79■□□□□ 0.28
SCC4YER147C GEA2P39993 1459 aaKnown RBP16.78■□□□□ 0.28
SCC4YER147C YBT1P32386 1661 aa16.77■□□□□ 0.27
SCC4YER147C IRC20Q06554 1556 aa16.74■□□□□ 0.27
SCC4YER147C CAT8P39113 1433 aa16.74■□□□□ 0.27
SCC4YER147C NTE1Q04958 1679 aa16.73■□□□□ 0.27
SCC4YER147C RPA190P10964 1664 aaKnown RBP16.72■□□□□ 0.27
SCC4YER147C DNF1P32660 1571 aa16.71■□□□□ 0.27
SCC4YER147C RPO21P04050 1733 aaKnown RBP16.69■□□□□ 0.26
SCC4YER147C SRB8P25648 1427 aa16.58■□□□□ 0.24
SCC4YER147C NUP159P40477 1460 aa16.58■□□□□ 0.24
SCC4YER147C GDB1Q06625 1536 aa16.56■□□□□ 0.24
SCC4YER147C POL5P39985 1022 aaKnown RBP16.56■□□□□ 0.24
SCC4YER147C NSR1P27476 414 aaKnown RBP RIP-Chip data16.55■□□□□ 0.24not detected
SCC4YER147C ARO1P08566 1588 aaKnown RBP16.52■□□□□ 0.24
SCC4YER147C MTC1P47018 478 aaKnown RBP16.51■□□□□ 0.23
SCC4YER147C PDR10P51533 1564 aa16.51■□□□□ 0.23
SCC4YER147C PDR12Q02785 1511 aa16.48■□□□□ 0.23
SCC4YER147C MET10P39692 1035 aa16.48■□□□□ 0.23
SCC4YER147C CKB1P43639 278 aa16.47■□□□□ 0.23
SCC4YER147C GCN2P15442 1659 aa16.42■□□□□ 0.22
SCC4YER147C SPO14P36126 1683 aa16.41■□□□□ 0.22
SCC4YER147C NUP157P40064 1391 aaKnown RBP16.41■□□□□ 0.22
SCC4YER147C BUD21Q08492 214 aaPredicted RBP16.35■□□□□ 0.21
SCC4YER147C YRF1-1P0CX20 1796 aa16.35■□□□□ 0.21
SCC4YER147C YRF1-5P0CX21 1796 aa16.35■□□□□ 0.21
SCC4YER147C YRF1-8P0CX22 1796 aa16.35■□□□□ 0.21
SCC4YER147C MMS1Q06211 1407 aa16.33■□□□□ 0.2
SCC4YER147C BUD3P25558 1636 aa16.32■□□□□ 0.2
SCC4YER147C YSP2Q06681 1438 aa16.31■□□□□ 0.2
SCC4YER147C MET5P47169 1442 aa16.29■□□□□ 0.2
SCC4YER147C ENP1P38333 483 aaKnown RBP16.29■□□□□ 0.2
SCC4YER147C NOP7P53261 605 aaKnown RBP16.27■□□□□ 0.2
SCC4YER147C SEC3P33332 1336 aaKnown RBP16.27■□□□□ 0.19
SCC4YER147C IQG1Q12280 1495 aa16.26■□□□□ 0.19
SCC4YER147C NOP2P40991 618 aaKnown RBP16.25■□□□□ 0.19
SCC4YER147C SPT7P35177 1332 aa16.2■□□□□ 0.18
SCC4YER147C PDR5P33302 1511 aaKnown RBP16.19■□□□□ 0.18
SCC4YER147C PAF1P38351 445 aa16.14■□□□□ 0.17
SCC4YER147C BNR1P40450 1375 aa16.11■□□□□ 0.17
SCC4YER147C YOR093CQ12275 1648 aa16.09■□□□□ 0.17
SCC4YER147C BFR2Q06631 534 aaKnown RBP16.08■□□□□ 0.17
SCC4YER147C SEC7P11075 2009 aaKnown RBP16.07■□□□□ 0.16
SCC4YER147C LTE1P07866 1435 aa16.04■□□□□ 0.16
SCC4YER147C MHP1P43638 1398 aa16.02■□□□□ 0.16
SCC4YER147C CHC1P22137 1653 aaKnown RBP16.01■□□□□ 0.15
SCC4YER147C ORC1P54784 914 aaPredicted RBP15.96■□□□□ 0.15
SCC4YER147C RAV1P47104 1357 aa15.95■□□□□ 0.14
SCC4YER147C TY3B-IQ7LHG5 1498 aaKnown RBP15.94■□□□□ 0.14
SCC4YER147C RTC1Q08281 1341 aa15.92■□□□□ 0.14
SCC4YER147C PSD2P53037 1138 aaKnown RBP15.9■□□□□ 0.14
SCC4YER147C PDR11P40550 1411 aa15.9■□□□□ 0.14
SCC4YER147C LEU3P08638 886 aa15.88■□□□□ 0.13
SCC4YER147C VMR1P38735 1592 aa15.86■□□□□ 0.13
SCC4YER147C PRS1P32895 427 aaKnown RBP15.85■□□□□ 0.13
SCC4YER147C TRM3Q07527 1436 aa15.85■□□□□ 0.13
SCC4YER147C DOP1Q03921 1698 aa15.83■□□□□ 0.12
SCC4YER147C TAF5P38129 798 aa15.82■□□□□ 0.12
SCC4YER147C YLR419WQ06698 1435 aaKnown RBP15.82■□□□□ 0.12
SCC4YER147C NUP188P52593 1655 aaKnown RBP15.81■□□□□ 0.12
SCC4YER147C DRS2P39524 1355 aa15.81■□□□□ 0.12
SCC4YER147C IML1P47170 1584 aa15.8■□□□□ 0.12
SCC4YER147C ESL2P36168 1195 aa15.78■□□□□ 0.12
SCC4YER147C PDS5Q04264 1277 aa15.78■□□□□ 0.12
SCC4YER147C KIP3P53086 805 aaKnown RBP15.75■□□□□ 0.11
SCC4YER147C NUP192P47054 1683 aa15.69■□□□□ 0.1
SCC4YER147C SCT1P32784 759 aa15.67■□□□□ 0.1
SCC4YER147C DNF2Q12675 1612 aa15.64■□□□□ 0.09
SCC4YER147C NST1P53935 1240 aa15.61■□□□□ 0.09
SCC4YER147C SPE2P21182 396 aa15.59■□□□□ 0.09
SCC4YER147C TYS1P36421 394 aaKnown RBP15.57■□□□□ 0.08
SCC4YER147C IPL1P38991 367 aa15.57■□□□□ 0.08
SCC4YER147C URN1Q06525 465 aaKnown RBP15.55■□□□□ 0.08
SCC4YER147C YAP3P38749 330 aa15.5■□□□□ 0.07
SCC4YER147C ITT1Q04638 464 aa15.5■□□□□ 0.07
SCC4YER147C TAF8Q03750 510 aa15.49■□□□□ 0.07
SCC4YER147C ALD4P46367 519 aaKnown RBP15.48■□□□□ 0.07
SCC4YER147C BCK1Q01389 1478 aa15.46■□□□□ 0.07
SCC4YER147C RAD9P14737 1309 aa15.46■□□□□ 0.07
SCC4YER147C RTG3P38165 486 aa15.46■□□□□ 0.06
SCC4YER147C BNI1P41832 1953 aa15.45■□□□□ 0.06
SCC4YER147C CHZ1P40019 153 aaPredicted RBP15.43■□□□□ 0.06
SCC4YER147C MLP1Q02455 1875 aaKnown RBP15.43■□□□□ 0.06
SCC4YER147C FKH1P40466 484 aa15.41■□□□□ 0.06
SCC4YER147C RPP0P05317 312 aaKnown RBP15.4■□□□□ 0.06
SCC4YER147C TFA1P36100 482 aa15.38■□□□□ 0.05
SCC4YER147C NAP1P25293 417 aaKnown RBP15.37■□□□□ 0.05
SCC4YER147C CDC45Q08032 650 aa15.37■□□□□ 0.05
SCC4YER147C VPS27P40343 622 aaKnown RBP15.37■□□□□ 0.05
SCC4YER147C CAB1Q04430 367 aa15.37■□□□□ 0.05
SCC4YER147C CFT1Q06632 1357 aaKnown RBP15.37■□□□□ 0.05
SCC4YER147C IOC4Q04213 475 aa15.35■□□□□ 0.05
SCC4YER147C HAP1P0CE41 1502 aa15.31■□□□□ 0.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms