RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W SAP30P38429 201 aa9.2□□□□□ -0.94
LSM4YER112W YEL023CP39992 682 aa9.2□□□□□ -0.94
LSM4YER112W MAK11P20484 414 aaKnown RBP9.14□□□□□ -0.95
LSM4YER112W CHL1P22516 861 aaPredicted RBP9.14□□□□□ -0.95
LSM4YER112W GRE2Q12068 342 aaKnown RBP9.14□□□□□ -0.95
LSM4YER112W PRE3P38624 215 aa9.09□□□□□ -0.95
LSM4YER112W RAM2P29703 316 aa9.08□□□□□ -0.96
LSM4YER112W MIF2P35201 549 aa9.08□□□□□ -0.96
LSM4YER112W BCK2P33306 851 aa9.07□□□□□ -0.96
LSM4YER112W GUT1P32190 709 aa9.06□□□□□ -0.96
LSM4YER112W ATH1P48016 1211 aa9.06□□□□□ -0.96
LSM4YER112W PTC3P34221 468 aaKnown RBP9.05□□□□□ -0.96
LSM4YER112W EDS1P38073 919 aa9.03□□□□□ -0.96
LSM4YER112W PML39Q03760 334 aa9□□□□□ -0.97
LSM4YER112W COQ8P27697 501 aa8.98□□□□□ -0.97
LSM4YER112W NST1P53935 1240 aa8.94□□□□□ -0.98
LSM4YER112W ELP4Q02884 456 aaKnown RBP8.92□□□□□ -0.98
LSM4YER112W NOP53Q12080 455 aaKnown RBP8.92□□□□□ -0.98
LSM4YER112W ARH1P48360 493 aa8.9□□□□□ -0.98
LSM4YER112W AI4P03878 556 aa8.89□□□□□ -0.99
LSM4YER112W SOL3P38858 249 aa8.89□□□□□ -0.99
LSM4YER112W YDR344CQ05510 147 aa8.89□□□□□ -0.99
LSM4YER112W MPH3P0CE00 602 aa8.88□□□□□ -0.99
LSM4YER112W VRP1P37370 817 aa8.88□□□□□ -0.99
LSM4YER112W XDJ1P39102 459 aa8.88□□□□□ -0.99
LSM4YER112W MID1P41821 548 aa8.85□□□□□ -0.99
LSM4YER112W PEX29Q03370 554 aa8.81□□□□□ -1
LSM4YER112W SPT23P35210 1082 aa8.79□□□□□ -1
LSM4YER112W YGR273CP53329 174 aa8.79□□□□□ -1
LSM4YER112W ILV3P39522 585 aaKnown RBP8.77□□□□□ -1.01
LSM4YER112W HAP5Q02516 242 aa8.76□□□□□ -1.01
LSM4YER112W BNI4P53858 892 aa8.72□□□□□ -1.01
LSM4YER112W MPC54Q08550 464 aa8.7□□□□□ -1.02
LSM4YER112W DPS1P04802 557 aaKnown RBP8.68□□□□□ -1.02
LSM4YER112W YML082WQ04533 649 aaKnown RBP8.68□□□□□ -1.02
LSM4YER112W PTC2P39966 464 aaKnown RBP8.67□□□□□ -1.02
LSM4YER112W SLI15P38283 698 aa8.66□□□□□ -1.02
LSM4YER112W NMA111P53920 997 aa8.64□□□□□ -1.03
LSM4YER112W DPL1Q05567 589 aa8.63□□□□□ -1.03
LSM4YER112W KEX1P09620 729 aa8.59□□□□□ -1.03
LSM4YER112W SET1P38827 1080 aaKnown RBP8.59□□□□□ -1.03
LSM4YER112W ISU2Q12056 156 aa8.55□□□□□ -1.04
LSM4YER112W RQC2Q12532 1038 aaKnown RBP8.52□□□□□ -1.05
LSM4YER112W UBP14P38237 781 aaKnown RBP8.5□□□□□ -1.05
LSM4YER112W YLR326WQ06170 240 aaKnown RBP8.5□□□□□ -1.05
LSM4YER112W RAM1P22007 431 aa8.47□□□□□ -1.05
LSM4YER112W CDC73Q06697 393 aa8.47□□□□□ -1.05
LSM4YER112W VHR2P40041 505 aa8.46□□□□□ -1.06
LSM4YER112W YPR015CQ12531 247 aa8.46□□□□□ -1.06
LSM4YER112W RPP1BP10622 106 aaKnown RBP8.45□□□□□ -1.06
LSM4YER112W RAD54P32863 898 aa8.44□□□□□ -1.06
LSM4YER112W SRC1Q03707 834 aa8.44□□□□□ -1.06
LSM4YER112W PCS60P38137 543 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
LSM4YER112W IFH1P39520 1085 aa8.43□□□□□ -1.06
LSM4YER112W GYP1Q08484 637 aa8.39□□□□□ -1.07
LSM4YER112W SAS4Q04003 481 aa8.38□□□□□ -1.07
LSM4YER112W PDR1P12383 1068 aa8.36□□□□□ -1.07
LSM4YER112W RAS1P01119 309 aa8.35□□□□□ -1.07
LSM4YER112W YDR090CQ03193 310 aa8.34□□□□□ -1.07
LSM4YER112W AMS1P22855 1083 aa8.33□□□□□ -1.08
LSM4YER112W KIC1P38692 1080 aa8.33□□□□□ -1.08
LSM4YER112W YPR148CQ06523 435 aa8.29□□□□□ -1.08
LSM4YER112W REF2P42073 533 aaPredicted RBP8.28□□□□□ -1.08
LSM4YER112W PEX21P50091 288 aa8.27□□□□□ -1.09
LSM4YER112W CSC1Q06538 782 aa8.27□□□□□ -1.09
LSM4YER112W GAP1P19145 602 aaPredicted RBP8.26□□□□□ -1.09
LSM4YER112W SDH2P21801 266 aa8.26□□□□□ -1.09
LSM4YER112W MRF1P30775 413 aaPredicted RBP8.26□□□□□ -1.09
LSM4YER112W TFB4Q12004 338 aa8.26□□□□□ -1.09
LSM4YER112W YEL077CQ3E7X8 1277 aa8.25□□□□□ -1.09
LSM4YER112W YRR1Q12172 810 aa8.24□□□□□ -1.09
LSM4YER112W TRK1P12685 1235 aa8.23□□□□□ -1.09
LSM4YER112W BUD20Q08004 166 aaPredicted RBP8.22□□□□□ -1.09
LSM4YER112W PRT1P06103 763 aaKnown RBP8.21□□□□□ -1.1
LSM4YER112W MAK21Q12176 1025 aaKnown RBP8.2□□□□□ -1.1
LSM4YER112W TUM1Q08686 304 aaKnown RBP8.19□□□□□ -1.1
LSM4YER112W STR2P47164 639 aa8.18□□□□□ -1.1
LSM4YER112W NUD1P32336 851 aa8.17□□□□□ -1.1
LSM4YER112W ORC6P38826 435 aa8.17□□□□□ -1.1
LSM4YER112W RGA2Q06407 1009 aa8.17□□□□□ -1.1
LSM4YER112W COX6P00427 148 aa8.16□□□□□ -1.1
LSM4YER112W ISM1P48526 1002 aa8.16□□□□□ -1.1
LSM4YER112W NPL4P33755 580 aa8.15□□□□□ -1.1
LSM4YER112W VPS70P47161 811 aa8.14□□□□□ -1.11
LSM4YER112W ERG12P07277 443 aa8.13□□□□□ -1.11
LSM4YER112W RGA1P39083 1007 aa8.13□□□□□ -1.11
LSM4YER112W DMA1P38823 416 aa8.12□□□□□ -1.11
LSM4YER112W MVP1P40959 511 aaKnown RBP8.1□□□□□ -1.11
LSM4YER112W GCD11P32481 527 aaKnown RBP8.07□□□□□ -1.12
LSM4YER112W TY1A-DR4O74302 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-HP0C2I4 478 aaKnown RBP8.05□□□□□ -1.12
LSM4YER112W TY1A-AP0CX57 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-PR1P0CX58 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-ORP0CX59 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-PR2P0CX60 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-DR5P0CX65 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-ER2P0CX66 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-GR3P0CX67 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-LR1P0CX68 440 aa8.05□□□□□ -1.12
LSM4YER112W TY1A-MR2P0CX69 440 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms