RNA–Protein interactions for RNA: YER089C

PTC2, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC2, Length 1,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC2YER089C TY1B-GR1Q12141 1755 aa19.72■□□□□ 0.75
PTC2YER089C TY1B-BLQ12490 1755 aa19.72■□□□□ 0.75
PTC2YER089C GEA1P47102 1408 aaPredicted RBP19.71■□□□□ 0.75
PTC2YER089C IFH1P39520 1085 aa19.7■□□□□ 0.74
PTC2YER089C IKI3Q06706 1349 aaKnown RBP19.68■□□□□ 0.74
PTC2YER089C RPA190P10964 1664 aaKnown RBP19.66■□□□□ 0.74
PTC2YER089C RTT106P40161 455 aa19.54■□□□□ 0.72
PTC2YER089C NTE1Q04958 1679 aa19.53■□□□□ 0.72
PTC2YER089C GEA2P39993 1459 aaKnown RBP19.52■□□□□ 0.71
PTC2YER089C NUP170P38181 1502 aa19.51■□□□□ 0.71
PTC2YER089C RPO21P04050 1733 aaKnown RBP19.5■□□□□ 0.71
PTC2YER089C NUP159P40477 1460 aa19.49■□□□□ 0.71
PTC2YER089C TY3B-GQ99315 1547 aa19.46■□□□□ 0.71
PTC2YER089C MET5P47169 1442 aa19.42■□□□□ 0.7
PTC2YER089C IRC20Q06554 1556 aa19.42■□□□□ 0.7
PTC2YER089C VPS15P22219 1454 aa19.39■□□□□ 0.69
PTC2YER089C SSM4P40318 1319 aa19.39■□□□□ 0.69
PTC2YER089C CAT8P39113 1433 aa19.37■□□□□ 0.69
PTC2YER089C MET10P39692 1035 aa19.32■□□□□ 0.68
PTC2YER089C YBT1P32386 1661 aa19.28■□□□□ 0.68
PTC2YER089C PDR12Q02785 1511 aa19.28■□□□□ 0.68
PTC2YER089C YRF1-1P0CX20 1796 aa19.24■□□□□ 0.67
PTC2YER089C YRF1-5P0CX21 1796 aa19.24■□□□□ 0.67
PTC2YER089C YRF1-8P0CX22 1796 aa19.24■□□□□ 0.67
PTC2YER089C PDR10P51533 1564 aa19.19■□□□□ 0.66
PTC2YER089C NUP157P40064 1391 aaKnown RBP19.17■□□□□ 0.66
PTC2YER089C GDB1Q06625 1536 aa19.16■□□□□ 0.66
PTC2YER089C SPO14P36126 1683 aa19.16■□□□□ 0.66
PTC2YER089C SRB8P25648 1427 aa19.11■□□□□ 0.65
PTC2YER089C ARO1P08566 1588 aaKnown RBP19.1■□□□□ 0.65
PTC2YER089C CKB1P43639 278 aa19.06■□□□□ 0.64
PTC2YER089C YSP2Q06681 1438 aa18.96■□□□□ 0.63
PTC2YER089C IQG1Q12280 1495 aa18.95■□□□□ 0.62
PTC2YER089C LTE1P07866 1435 aa18.94■□□□□ 0.62
PTC2YER089C MMS1Q06211 1407 aa18.9■□□□□ 0.62
PTC2YER089C BUD3P25558 1636 aa18.89■□□□□ 0.61
PTC2YER089C BUD21Q08492 214 aaPredicted RBP18.87■□□□□ 0.61
PTC2YER089C BNR1P40450 1375 aa18.75■□□□□ 0.59
PTC2YER089C SEC7P11075 2009 aaKnown RBP18.74■□□□□ 0.59
PTC2YER089C GCN2P15442 1659 aa18.74■□□□□ 0.59
PTC2YER089C DRS2P39524 1355 aa18.72■□□□□ 0.59
PTC2YER089C TRM3Q07527 1436 aa18.68■□□□□ 0.58
PTC2YER089C DOP1Q03921 1698 aa18.6■□□□□ 0.57
PTC2YER089C ITT1Q04638 464 aa18.57■□□□□ 0.56
PTC2YER089C NOP7P53261 605 aaKnown RBP18.53■□□□□ 0.56
PTC2YER089C BNI1P41832 1953 aa18.52■□□□□ 0.56
PTC2YER089C CHC1P22137 1653 aaKnown RBP18.5■□□□□ 0.55
PTC2YER089C PAF1P38351 445 aa18.49■□□□□ 0.55
PTC2YER089C YOR093CQ12275 1648 aa18.49■□□□□ 0.55
PTC2YER089C PDR5P33302 1511 aaKnown RBP18.47■□□□□ 0.55
PTC2YER089C POL5P39985 1022 aaKnown RBP18.46■□□□□ 0.55
PTC2YER089C BFR2Q06631 534 aaKnown RBP18.42■□□□□ 0.54
PTC2YER089C RAV1P47104 1357 aa18.35■□□□□ 0.53
PTC2YER089C VMR1P38735 1592 aa18.35■□□□□ 0.53
PTC2YER089C PDR11P40550 1411 aa18.34■□□□□ 0.53
PTC2YER089C NUP188P52593 1655 aaKnown RBP18.33■□□□□ 0.52
PTC2YER089C RTC1Q08281 1341 aa18.29■□□□□ 0.52
PTC2YER089C IML1P47170 1584 aa18.28■□□□□ 0.52
PTC2YER089C DNF2Q12675 1612 aa18.27■□□□□ 0.52
PTC2YER089C URN1Q06525 465 aaKnown RBP18.26■□□□□ 0.51
PTC2YER089C IPL1P38991 367 aa18.2■□□□□ 0.5
PTC2YER089C TYS1P36421 394 aaKnown RBP18.15■□□□□ 0.5
PTC2YER089C YAP3P38749 330 aa18.14■□□□□ 0.49
PTC2YER089C TY3B-IQ7LHG5 1498 aaKnown RBP18.11■□□□□ 0.49
PTC2YER089C ESL2P36168 1195 aa18.09■□□□□ 0.49
PTC2YER089C TAF5P38129 798 aa18.07■□□□□ 0.48
PTC2YER089C SEC3P33332 1336 aaKnown RBP18.06■□□□□ 0.48
PTC2YER089C ORC1P54784 914 aaPredicted RBP18.04■□□□□ 0.48
PTC2YER089C MHP1P43638 1398 aa18.02■□□□□ 0.48
PTC2YER089C NUP192P47054 1683 aa18.01■□□□□ 0.47
PTC2YER089C HAP1P0CE41 1502 aa17.98■□□□□ 0.47
PTC2YER089C NSR1P27476 414 aaKnown RBP RIP-Chip data17.96■□□□□ 0.47 RIP-Chip
PTC2YER089C KIP3P53086 805 aaKnown RBP17.96■□□□□ 0.47
PTC2YER089C SPT7P35177 1332 aa17.94■□□□□ 0.46
PTC2YER089C YLR419WQ06698 1435 aaKnown RBP17.93■□□□□ 0.46
PTC2YER089C ENP1P38333 483 aaKnown RBP17.91■□□□□ 0.46
PTC2YER089C ALD4P46367 519 aaKnown RBP17.91■□□□□ 0.46
PTC2YER089C SCT1P32784 759 aa17.88■□□□□ 0.45
PTC2YER089C RAD9P14737 1309 aa17.86■□□□□ 0.45
PTC2YER089C BCK1Q01389 1478 aa17.85■□□□□ 0.45
PTC2YER089C SPE2P21182 396 aa17.85■□□□□ 0.45
PTC2YER089C DNF3Q12674 1656 aa17.84■□□□□ 0.45
PTC2YER089C TAF8Q03750 510 aa17.81■□□□□ 0.44
PTC2YER089C PDS5Q04264 1277 aa17.81■□□□□ 0.44
PTC2YER089C ABP1P15891 592 aaKnown RBP17.79■□□□□ 0.44
PTC2YER089C CAB1Q04430 367 aa17.79■□□□□ 0.44
PTC2YER089C PSD2P53037 1138 aaKnown RBP17.77■□□□□ 0.43
PTC2YER089C NAP1P25293 417 aaKnown RBP17.75■□□□□ 0.43
PTC2YER089C MAK10Q02197 733 aa17.73■□□□□ 0.43
PTC2YER089C MRX12P47084 519 aa17.7■□□□□ 0.42
PTC2YER089C KRE5P22023 1365 aa17.67■□□□□ 0.42
PTC2YER089C LEU3P08638 886 aa17.66■□□□□ 0.42
PTC2YER089C CHZ1P40019 153 aaPredicted RBP17.66■□□□□ 0.42
PTC2YER089C CFT1Q06632 1357 aaKnown RBP17.63■□□□□ 0.41
PTC2YER089C RIA1P53893 1110 aa17.62■□□□□ 0.41
PTC2YER089C FKH1P40466 484 aa17.59■□□□□ 0.41
PTC2YER089C RTG3P38165 486 aa17.56■□□□□ 0.4
PTC2YER089C NST1P53935 1240 aa17.56■□□□□ 0.4
PTC2YER089C RCM1P53972 490 aa17.49■□□□□ 0.39
PTC2YER089C PRS1P32895 427 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms