RNA–Protein interactions for RNA: YDR540C

IRC4, Transcript of Putative protein of unknown function, yeastyeast

Gene IRC4, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC4YDR540C YEL023CP39992 682 aa5.95□□□□□ -1.46
IRC4YDR540C YDL129WQ07555 291 aa5.95□□□□□ -1.46
IRC4YDR540C MIF2P35201 549 aa5.93□□□□□ -1.46
IRC4YDR540C GRE2Q12068 342 aaKnown RBP5.93□□□□□ -1.46
IRC4YDR540C MAK11P20484 414 aaKnown RBP5.91□□□□□ -1.46
IRC4YDR540C CHL1P22516 861 aaPredicted RBP5.9□□□□□ -1.46
IRC4YDR540C ATH1P48016 1211 aa5.89□□□□□ -1.47
IRC4YDR540C RAM2P29703 316 aa5.88□□□□□ -1.47
IRC4YDR540C GUT1P32190 709 aa5.88□□□□□ -1.47
IRC4YDR540C PTC3P34221 468 aaKnown RBP5.86□□□□□ -1.47
IRC4YDR540C PRE3P38624 215 aa5.86□□□□□ -1.47
IRC4YDR540C BCK2P33306 851 aa5.85□□□□□ -1.47
IRC4YDR540C PML39Q03760 334 aa5.84□□□□□ -1.47
IRC4YDR540C COQ8P27697 501 aa5.83□□□□□ -1.48
IRC4YDR540C EDS1P38073 919 aa5.83□□□□□ -1.48
IRC4YDR540C RQC2Q12532 1038 aaKnown RBP5.81□□□□□ -1.48
IRC4YDR540C ELP4Q02884 456 aaKnown RBP5.8□□□□□ -1.48
IRC4YDR540C NOP53Q12080 455 aaKnown RBP5.78□□□□□ -1.48
IRC4YDR540C VRP1P37370 817 aa5.76□□□□□ -1.49
IRC4YDR540C MPH3P0CE00 602 aa5.75□□□□□ -1.49
IRC4YDR540C MID1P41821 548 aa5.75□□□□□ -1.49
IRC4YDR540C AI4P03878 556 aa5.74□□□□□ -1.49
IRC4YDR540C SOL3P38858 249 aa5.74□□□□□ -1.49
IRC4YDR540C ARH1P48360 493 aa5.74□□□□□ -1.49
IRC4YDR540C PEX29Q03370 554 aa5.74□□□□□ -1.49
IRC4YDR540C XDJ1P39102 459 aa5.73□□□□□ -1.49
IRC4YDR540C NST1P53935 1240 aa5.73□□□□□ -1.49
IRC4YDR540C SPT23P35210 1082 aa5.7□□□□□ -1.5
IRC4YDR540C YDR344CQ05510 147 aa5.7□□□□□ -1.5
IRC4YDR540C DMA1P38823 416 aa5.69□□□□□ -1.5
IRC4YDR540C YGR273CP53329 174 aa5.69□□□□□ -1.5
IRC4YDR540C HAP5Q02516 242 aa5.67□□□□□ -1.5
IRC4YDR540C ILV3P39522 585 aaKnown RBP5.63□□□□□ -1.51
IRC4YDR540C PTC2P39966 464 aaKnown RBP5.62□□□□□ -1.51
IRC4YDR540C BNI4P53858 892 aa5.62□□□□□ -1.51
IRC4YDR540C NMA111P53920 997 aa5.62□□□□□ -1.51
IRC4YDR540C MPC54Q08550 464 aa5.62□□□□□ -1.51
IRC4YDR540C YML082WQ04533 649 aaKnown RBP5.61□□□□□ -1.51
IRC4YDR540C DPS1P04802 557 aaKnown RBP5.6□□□□□ -1.51
IRC4YDR540C SLI15P38283 698 aa5.6□□□□□ -1.51
IRC4YDR540C SET1P38827 1080 aaKnown RBP5.6□□□□□ -1.51
IRC4YDR540C DPL1Q05567 589 aa5.6□□□□□ -1.51
IRC4YDR540C KEX1P09620 729 aa5.56□□□□□ -1.52
IRC4YDR540C ISU2Q12056 156 aa5.55□□□□□ -1.52
IRC4YDR540C RPP1BP10622 106 aaKnown RBP5.52□□□□□ -1.53
IRC4YDR540C UBP14P38237 781 aaKnown RBP5.52□□□□□ -1.53
IRC4YDR540C IFH1P39520 1085 aa5.5□□□□□ -1.53
IRC4YDR540C VHR2P40041 505 aa5.5□□□□□ -1.53
IRC4YDR540C CDC73Q06697 393 aa5.5□□□□□ -1.53
IRC4YDR540C RAD54P32863 898 aa5.49□□□□□ -1.53
IRC4YDR540C YLR326WQ06170 240 aaKnown RBP5.49□□□□□ -1.53
IRC4YDR540C PCS60P38137 543 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53 RIP-Chip
IRC4YDR540C GYP1Q08484 637 aa5.47□□□□□ -1.53
IRC4YDR540C SAS10Q12136 610 aaPredicted RBP5.46□□□□□ -1.54
IRC4YDR540C KIC1P38692 1080 aa5.45□□□□□ -1.54
IRC4YDR540C RAM1P22007 431 aa5.43□□□□□ -1.54
IRC4YDR540C SAS4Q04003 481 aa5.43□□□□□ -1.54
IRC4YDR540C YPR015CQ12531 247 aa5.43□□□□□ -1.54
IRC4YDR540C PEX21P50091 288 aa5.42□□□□□ -1.54
IRC4YDR540C PDR1P12383 1068 aa5.41□□□□□ -1.54
IRC4YDR540C RAS1P01119 309 aa5.4□□□□□ -1.54
IRC4YDR540C REF2P42073 533 aaPredicted RBP5.4□□□□□ -1.54
IRC4YDR540C YPR148CQ06523 435 aa5.4□□□□□ -1.54
IRC4YDR540C YDR090CQ03193 310 aa5.39□□□□□ -1.55
IRC4YDR540C AMS1P22855 1083 aa5.37□□□□□ -1.55
IRC4YDR540C MRF1P30775 413 aaPredicted RBP5.37□□□□□ -1.55
IRC4YDR540C SRC1Q03707 834 aa5.37□□□□□ -1.55
IRC4YDR540C CSC1Q06538 782 aa5.37□□□□□ -1.55
IRC4YDR540C YRR1Q12172 810 aa5.37□□□□□ -1.55
IRC4YDR540C TFB4Q12004 338 aa5.36□□□□□ -1.55
IRC4YDR540C PRT1P06103 763 aaKnown RBP5.34□□□□□ -1.55
IRC4YDR540C VPS70P47161 811 aa5.34□□□□□ -1.55
IRC4YDR540C TUM1Q08686 304 aaKnown RBP5.34□□□□□ -1.55
IRC4YDR540C YEL077CQ3E7X8 1277 aa5.34□□□□□ -1.55
IRC4YDR540C NPL4P33755 580 aa5.33□□□□□ -1.56
IRC4YDR540C BUD20Q08004 166 aaPredicted RBP5.33□□□□□ -1.56
IRC4YDR540C MAK21Q12176 1025 aaKnown RBP5.33□□□□□ -1.56
IRC4YDR540C COX6P00427 148 aa5.31□□□□□ -1.56
IRC4YDR540C TRK1P12685 1235 aa5.31□□□□□ -1.56
IRC4YDR540C GAP1P19145 602 aaPredicted RBP5.31□□□□□ -1.56
IRC4YDR540C ERG12P07277 443 aa5.29□□□□□ -1.56
IRC4YDR540C NUD1P32336 851 aa5.29□□□□□ -1.56
IRC4YDR540C CKB1P43639 278 aa5.29□□□□□ -1.56
IRC4YDR540C ISM1P48526 1002 aa5.29□□□□□ -1.56
IRC4YDR540C SDH2P21801 266 aa5.28□□□□□ -1.56
IRC4YDR540C GCD11P32481 527 aaKnown RBP5.28□□□□□ -1.56
IRC4YDR540C MVP1P40959 511 aaKnown RBP5.27□□□□□ -1.57
IRC4YDR540C STR2P47164 639 aa5.27□□□□□ -1.57
IRC4YDR540C SPT16P32558 1035 aaKnown RBP5.26□□□□□ -1.57
IRC4YDR540C ORC6P38826 435 aa5.26□□□□□ -1.57
IRC4YDR540C LEU3P08638 886 aa5.25□□□□□ -1.57
IRC4YDR540C YPR109WQ06104 294 aa5.25□□□□□ -1.57
IRC4YDR540C RGR1P19263 1082 aa5.23□□□□□ -1.57
IRC4YDR540C PAT1P25644 796 aaKnown RBP5.23□□□□□ -1.57
IRC4YDR540C PBS2P08018 668 aa5.2□□□□□ -1.58
IRC4YDR540C SEC2P17065 759 aa5.2□□□□□ -1.58
IRC4YDR540C DSF2P38213 736 aa5.2□□□□□ -1.58
IRC4YDR540C GCR2Q01722 534 aa5.2□□□□□ -1.58
IRC4YDR540C RGA1P39083 1007 aa5.18□□□□□ -1.58
IRC4YDR540C TY1A-DR4O74302 440 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms