RNA–Protein interactions for RNA: YDR496C

PUF6, Transcript of Pumilio-homology domain protein, yeast

Gene PUF6, Length 1,971 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUF6	YDR496C	NOP53	Q12080	455 aa	Known RBP	4.88	□□□□□ -1.63
PUF6	YDR496C	RTG1	P32607	177 aa		4.87	□□□□□ -1.63
PUF6	YDR496C	ATH1	P48016	1211 aa		4.87	□□□□□ -1.63
PUF6	YDR496C	GUT1	P32190	709 aa		4.87	□□□□□ -1.63
PUF6	YDR496C	JIP4	Q03361	876 aa		4.87	□□□□□ -1.63
PUF6	YDR496C	SEC61	P32915	480 aa		4.86	□□□□□ -1.63
PUF6	YDR496C	YJL171C	P46992	396 aa		4.85	□□□□□ -1.63
PUF6	YDR496C	YEL023C	P39992	682 aa		4.85	□□□□□ -1.63
PUF6	YDR496C	SET1	P38827	1080 aa	Known RBP	4.84	□□□□□ -1.63
PUF6	YDR496C	NCR1	Q12200	1170 aa		4.84	□□□□□ -1.63
PUF6	YDR496C	DAN4	P47179	1161 aa		4.84	□□□□□ -1.64
PUF6	YDR496C	PTC4	P38089	393 aa		4.83	□□□□□ -1.64
PUF6	YDR496C	BMT6	Q12291	365 aa		4.82	□□□□□ -1.64
PUF6	YDR496C	TFG1	P41895	735 aa	Predicted RBP	4.81	□□□□□ -1.64
PUF6	YDR496C	NST1	P53935	1240 aa		4.79	□□□□□ -1.64
PUF6	YDR496C	SOL3	P38858	249 aa		4.78	□□□□□ -1.64
PUF6	YDR496C	YDL129W	Q07555	291 aa		4.77	□□□□□ -1.65
PUF6	YDR496C	AI4	P03878	556 aa		4.76	□□□□□ -1.65
PUF6	YDR496C	MPH3	P0CE00	602 aa		4.76	□□□□□ -1.65
PUF6	YDR496C	IFH1	P39520	1085 aa		4.76	□□□□□ -1.65
PUF6	YDR496C	YGR273C	P53329	174 aa		4.76	□□□□□ -1.65
PUF6	YDR496C	SAP30	P38429	201 aa		4.74	□□□□□ -1.65
PUF6	YDR496C	PML39	Q03760	334 aa		4.74	□□□□□ -1.65
PUF6	YDR496C	ILV3	P39522	585 aa	Known RBP	4.73	□□□□□ -1.65
PUF6	YDR496C	YPR148C	Q06523	435 aa		4.73	□□□□□ -1.65
PUF6	YDR496C	SAS10	Q12136	610 aa	Predicted RBP	4.69	□□□□□ -1.66
PUF6	YDR496C	KEX1	P09620	729 aa		4.69	□□□□□ -1.66
PUF6	YDR496C	MID1	P41821	548 aa		4.69	□□□□□ -1.66
PUF6	YDR496C	YLR326W	Q06170	240 aa	Known RBP	4.68	□□□□□ -1.66
PUF6	YDR496C	CHL1	P22516	861 aa	Predicted RBP	4.67	□□□□□ -1.66
PUF6	YDR496C	UBP14	P38237	781 aa	Known RBP	4.67	□□□□□ -1.66
PUF6	YDR496C	PRE3	P38624	215 aa		4.67	□□□□□ -1.66
PUF6	YDR496C	VHR2	P40041	505 aa		4.67	□□□□□ -1.66
PUF6	YDR496C	SLI15	P38283	698 aa		4.67	□□□□□ -1.66
PUF6	YDR496C	PEX29	Q03370	554 aa		4.67	□□□□□ -1.66
PUF6	YDR496C	VPS70	P47161	811 aa		4.66	□□□□□ -1.66
PUF6	YDR496C	REF2	P42073	533 aa	Predicted RBP	4.65	□□□□□ -1.67
PUF6	YDR496C	ARH1	P48360	493 aa		4.65	□□□□□ -1.67
PUF6	YDR496C	YDR344C	Q05510	147 aa		4.65	□□□□□ -1.67
PUF6	YDR496C	RAD54	P32863	898 aa		4.64	□□□□□ -1.67
PUF6	YDR496C	ELP4	Q02884	456 aa	Known RBP	4.64	□□□□□ -1.67
PUF6	YDR496C	MPC54	Q08550	464 aa		4.64	□□□□□ -1.67
PUF6	YDR496C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
PUF6	YDR496C	HAP5	Q02516	242 aa		4.62	□□□□□ -1.67
PUF6	YDR496C	YDR090C	Q03193	310 aa		4.62	□□□□□ -1.67
PUF6	YDR496C	DPL1	Q05567	589 aa		4.62	□□□□□ -1.67
PUF6	YDR496C	KIC1	P38692	1080 aa		4.61	□□□□□ -1.67
PUF6	YDR496C	CKB1	P43639	278 aa		4.61	□□□□□ -1.67
PUF6	YDR496C	BCK2	P33306	851 aa		4.6	□□□□□ -1.67
PUF6	YDR496C	SPT23	P35210	1082 aa		4.6	□□□□□ -1.67
PUF6	YDR496C	NMA111	P53920	997 aa		4.6	□□□□□ -1.67
PUF6	YDR496C	MAK21	Q12176	1025 aa	Known RBP	4.6	□□□□□ -1.67
PUF6	YDR496C	RPP1B	P10622	106 aa	Known RBP	4.58	□□□□□ -1.68
PUF6	YDR496C	BNI4	P53858	892 aa		4.58	□□□□□ -1.68
PUF6	YDR496C	CDC73	Q06697	393 aa		4.58	□□□□□ -1.68
PUF6	YDR496C	COX6	P00427	148 aa		4.58	□□□□□ -1.68
PUF6	YDR496C	ISU2	Q12056	156 aa		4.57	□□□□□ -1.68
PUF6	YDR496C	PBS2	P08018	668 aa		4.56	□□□□□ -1.68
PUF6	YDR496C	LEU3	P08638	886 aa		4.55	□□□□□ -1.68
PUF6	YDR496C	VRP1	P37370	817 aa		4.55	□□□□□ -1.68
PUF6	YDR496C	PTC2	P39966	464 aa	Known RBP	4.55	□□□□□ -1.68
PUF6	YDR496C	YML082W	Q04533	649 aa	Known RBP	4.54	□□□□□ -1.68
PUF6	YDR496C	LEO1	P38439	464 aa		4.53	□□□□□ -1.68
PUF6	YDR496C	GAP1	P19145	602 aa	Predicted RBP	4.53	□□□□□ -1.68
PUF6	YDR496C	ORC6	P38826	435 aa		4.53	□□□□□ -1.68
PUF6	YDR496C	XDJ1	P39102	459 aa		4.52	□□□□□ -1.69
PUF6	YDR496C	CSC1	Q06538	782 aa		4.52	□□□□□ -1.69
PUF6	YDR496C	DSF2	P38213	736 aa		4.51	□□□□□ -1.69
PUF6	YDR496C	TFB4	Q12004	338 aa		4.51	□□□□□ -1.69
PUF6	YDR496C	PEX21	P50091	288 aa		4.51	□□□□□ -1.69
PUF6	YDR496C	RAM1	P22007	431 aa		4.5	□□□□□ -1.69
PUF6	YDR496C	MAM3	Q12296	706 aa		4.5	□□□□□ -1.69
PUF6	YDR496C	PDR1	P12383	1068 aa		4.49	□□□□□ -1.69
PUF6	YDR496C	SPB4	P25808	606 aa	Predicted RBP	4.49	□□□□□ -1.69
PUF6	YDR496C	YPR015C	Q12531	247 aa		4.49	□□□□□ -1.69
PUF6	YDR496C	YRR1	Q12172	810 aa		4.48	□□□□□ -1.69
PUF6	YDR496C	MVP1	P40959	511 aa	Known RBP	4.47	□□□□□ -1.69
PUF6	YDR496C	IES2	P40154	320 aa		4.47	□□□□□ -1.69
PUF6	YDR496C	TUM1	Q08686	304 aa	Known RBP	4.47	□□□□□ -1.69
PUF6	YDR496C	RGR1	P19263	1082 aa		4.46	□□□□□ -1.7
PUF6	YDR496C	PSE1	P32337	1089 aa	Known RBP	4.45	□□□□□ -1.7
PUF6	YDR496C	NUP42	P49686	430 aa	Known RBP	4.44	□□□□□ -1.7
PUF6	YDR496C	NUD1	P32336	851 aa		4.44	□□□□□ -1.7
PUF6	YDR496C	YPR109W	Q06104	294 aa		4.44	□□□□□ -1.7
PUF6	YDR496C	GYP1	Q08484	637 aa		4.43	□□□□□ -1.7
PUF6	YDR496C	STR2	P47164	639 aa		4.42	□□□□□ -1.7
PUF6	YDR496C	ISM1	P48526	1002 aa		4.42	□□□□□ -1.7
PUF6	YDR496C	SAS4	Q04003	481 aa		4.42	□□□□□ -1.7
PUF6	YDR496C	CLB5	P30283	435 aa		4.41	□□□□□ -1.7
PUF6	YDR496C	RPN1	P38764	993 aa	Known RBP	4.41	□□□□□ -1.7
PUF6	YDR496C	BUD20	Q08004	166 aa	Predicted RBP	4.41	□□□□□ -1.7
PUF6	YDR496C	DPS1	P04802	557 aa	Known RBP	4.4	□□□□□ -1.7
PUF6	YDR496C	DIT2	P21595	489 aa		4.4	□□□□□ -1.7
PUF6	YDR496C	NPL4	P33755	580 aa		4.4	□□□□□ -1.7
PUF6	YDR496C	PRT1	P06103	763 aa	Known RBP	4.39	□□□□□ -1.71
PUF6	YDR496C	URN1	Q06525	465 aa	Known RBP	4.38	□□□□□ -1.71
PUF6	YDR496C	TEA1	P47988	759 aa		4.37	□□□□□ -1.71
PUF6	YDR496C	TY1A-DR4	O74302	440 aa		4.36	□□□□□ -1.71
PUF6	YDR496C	TY1A-H	P0C2I4	478 aa	Known RBP	4.36	□□□□□ -1.71
PUF6	YDR496C	TY1A-A	P0CX57	440 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms