RNA–Protein interactions for RNA: YDR462W

MRPL28, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL28, Length 444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL28YDR462W TY1B-NL1Q12112 1755 aa9.66□□□□□ -0.86
MRPL28YDR462W TY1B-GR1Q12141 1755 aa9.66□□□□□ -0.86
MRPL28YDR462W TY1B-BLQ12490 1755 aa9.66□□□□□ -0.86
MRPL28YDR462W IFH1P39520 1085 aa9.65□□□□□ -0.86
MRPL28YDR462W PAN1P32521 1480 aa9.64□□□□□ -0.87
MRPL28YDR462W YBT1P32386 1661 aa9.6□□□□□ -0.87
MRPL28YDR462W ESC1Q03661 1658 aaKnown RBP9.59□□□□□ -0.87
MRPL28YDR462W IRC20Q06554 1556 aa9.58□□□□□ -0.88
MRPL28YDR462W VPS15P22219 1454 aa9.56□□□□□ -0.88
MRPL28YDR462W GEA2P39993 1459 aaKnown RBP9.56□□□□□ -0.88
MRPL28YDR462W RQC2Q12532 1038 aaKnown RBP9.55□□□□□ -0.88
MRPL28YDR462W CAT8P39113 1433 aa9.54□□□□□ -0.88
MRPL28YDR462W NTE1Q04958 1679 aa9.54□□□□□ -0.88
MRPL28YDR462W RPO21P04050 1733 aaKnown RBP9.53□□□□□ -0.88
MRPL28YDR462W RPA190P10964 1664 aaKnown RBP9.53□□□□□ -0.88
MRPL28YDR462W DNF1P32660 1571 aa9.48□□□□□ -0.89
MRPL28YDR462W PDR10P51533 1564 aa9.47□□□□□ -0.89
MRPL28YDR462W NSR1P27476 414 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89 RIP-Chip
MRPL28YDR462W RTT106P40161 455 aa9.45□□□□□ -0.9
MRPL28YDR462W SRB8P25648 1427 aa9.43□□□□□ -0.9
MRPL28YDR462W ARO1P08566 1588 aaKnown RBP9.42□□□□□ -0.9
MRPL28YDR462W POL5P39985 1022 aaKnown RBP9.42□□□□□ -0.9
MRPL28YDR462W GCN2P15442 1659 aa9.42□□□□□ -0.9
MRPL28YDR462W PDR12Q02785 1511 aa9.41□□□□□ -0.9
MRPL28YDR462W GDB1Q06625 1536 aa9.41□□□□□ -0.9
MRPL28YDR462W NUP159P40477 1460 aa9.4□□□□□ -0.91
MRPL28YDR462W FAP1P53971 965 aa9.36□□□□□ -0.91
MRPL28YDR462W SPO14P36126 1683 aa9.34□□□□□ -0.91
MRPL28YDR462W PDR5P33302 1511 aaKnown RBP9.32□□□□□ -0.92
MRPL28YDR462W ENP1P38333 483 aaKnown RBP9.32□□□□□ -0.92
MRPL28YDR462W IQG1Q12280 1495 aa9.32□□□□□ -0.92
MRPL28YDR462W YRF1-1P0CX20 1796 aa9.32□□□□□ -0.92
MRPL28YDR462W YRF1-5P0CX21 1796 aa9.32□□□□□ -0.92
MRPL28YDR462W YRF1-8P0CX22 1796 aa9.32□□□□□ -0.92
MRPL28YDR462W MET10P39692 1035 aa9.31□□□□□ -0.92
MRPL28YDR462W NOP2P40991 618 aaKnown RBP9.31□□□□□ -0.92
MRPL28YDR462W MMS1Q06211 1407 aa9.31□□□□□ -0.92
MRPL28YDR462W SEC3P33332 1336 aaKnown RBP9.31□□□□□ -0.92
MRPL28YDR462W NUP157P40064 1391 aaKnown RBP9.29□□□□□ -0.92
MRPL28YDR462W CKB1P43639 278 aa9.27□□□□□ -0.93
MRPL28YDR462W YSP2Q06681 1438 aa9.27□□□□□ -0.93
MRPL28YDR462W BUD3P25558 1636 aa9.25□□□□□ -0.93
MRPL28YDR462W MET5P47169 1442 aa9.24□□□□□ -0.93
MRPL28YDR462W BUD21Q08492 214 aaPredicted RBP9.23□□□□□ -0.93
MRPL28YDR462W SPT7P35177 1332 aa9.22□□□□□ -0.93
MRPL28YDR462W YOR093CQ12275 1648 aa9.2□□□□□ -0.94
MRPL28YDR462W NOP7P53261 605 aaKnown RBP9.2□□□□□ -0.94
MRPL28YDR462W SEC7P11075 2009 aaKnown RBP9.18□□□□□ -0.94
MRPL28YDR462W CHC1P22137 1653 aaKnown RBP9.16□□□□□ -0.94
MRPL28YDR462W MHP1P43638 1398 aa9.14□□□□□ -0.95
MRPL28YDR462W PAF1P38351 445 aa9.13□□□□□ -0.95
MRPL28YDR462W TY3B-IQ7LHG5 1498 aaKnown RBP9.13□□□□□ -0.95
MRPL28YDR462W LTE1P07866 1435 aa9.13□□□□□ -0.95
MRPL28YDR462W BNR1P40450 1375 aa9.12□□□□□ -0.95
MRPL28YDR462W BFR2Q06631 534 aaKnown RBP9.11□□□□□ -0.95
MRPL28YDR462W YLR419WQ06698 1435 aaKnown RBP9.09□□□□□ -0.95
MRPL28YDR462W RAV1P47104 1357 aa9.09□□□□□ -0.95
MRPL28YDR462W PRS1P32895 427 aaKnown RBP9.06□□□□□ -0.96
MRPL28YDR462W RTC1Q08281 1341 aa9.05□□□□□ -0.96
MRPL28YDR462W VMR1P38735 1592 aa9.04□□□□□ -0.96
MRPL28YDR462W PDR11P40550 1411 aa9.04□□□□□ -0.96
MRPL28YDR462W NUP188P52593 1655 aaKnown RBP9.02□□□□□ -0.97
MRPL28YDR462W DOP1Q03921 1698 aa9.02□□□□□ -0.97
MRPL28YDR462W PSD2P53037 1138 aaKnown RBP9.02□□□□□ -0.97
MRPL28YDR462W TRM3Q07527 1436 aa9.02□□□□□ -0.97
MRPL28YDR462W IML1P47170 1584 aa8.99□□□□□ -0.97
MRPL28YDR462W DRS2P39524 1355 aa8.98□□□□□ -0.97
MRPL28YDR462W NUP192P47054 1683 aa8.97□□□□□ -0.97
MRPL28YDR462W ORC1P54784 914 aaPredicted RBP8.96□□□□□ -0.98
MRPL28YDR462W ESL2P36168 1195 aa8.95□□□□□ -0.98
MRPL28YDR462W PDS5Q04264 1277 aa8.95□□□□□ -0.98
MRPL28YDR462W LEU3P08638 886 aa8.94□□□□□ -0.98
MRPL28YDR462W TAF5P38129 798 aa8.93□□□□□ -0.98
MRPL28YDR462W DNF2Q12675 1612 aa8.92□□□□□ -0.98
MRPL28YDR462W SCT1P32784 759 aa8.92□□□□□ -0.98
MRPL28YDR462W KIP3P53086 805 aaKnown RBP8.9□□□□□ -0.98
MRPL28YDR462W TFA1P36100 482 aa8.86□□□□□ -0.99
MRPL28YDR462W MLP1Q02455 1875 aaKnown RBP8.85□□□□□ -0.99
MRPL28YDR462W NST1P53935 1240 aa8.85□□□□□ -0.99
MRPL28YDR462W SPE2P21182 396 aa8.83□□□□□ -1
MRPL28YDR462W PRY3P47033 881 aa8.82□□□□□ -1
MRPL28YDR462W IOC4Q04213 475 aa8.82□□□□□ -1
MRPL28YDR462W BCK1Q01389 1478 aa8.82□□□□□ -1
MRPL28YDR462W RPP0P05317 312 aaKnown RBP8.81□□□□□ -1
MRPL28YDR462W IPL1P38991 367 aa8.8□□□□□ -1
MRPL28YDR462W HAP1P0CE41 1502 aa8.79□□□□□ -1
MRPL28YDR462W TYS1P36421 394 aaKnown RBP8.78□□□□□ -1
MRPL28YDR462W YAP3P38749 330 aa8.78□□□□□ -1
MRPL28YDR462W URN1Q06525 465 aaKnown RBP8.78□□□□□ -1
MRPL28YDR462W ALD4P46367 519 aaKnown RBP8.77□□□□□ -1.01
MRPL28YDR462W BNI1P41832 1953 aa8.77□□□□□ -1.01
MRPL28YDR462W CFT1Q06632 1357 aaKnown RBP8.76□□□□□ -1.01
MRPL28YDR462W VPS27P40343 622 aaKnown RBP8.76□□□□□ -1.01
MRPL28YDR462W FKH1P40466 484 aa8.76□□□□□ -1.01
MRPL28YDR462W CDC45Q08032 650 aa8.76□□□□□ -1.01
MRPL28YDR462W RTG3P38165 486 aa8.74□□□□□ -1.01
MRPL28YDR462W TAF8Q03750 510 aa8.74□□□□□ -1.01
MRPL28YDR462W RAD9P14737 1309 aa8.74□□□□□ -1.01
MRPL28YDR462W CHZ1P40019 153 aaPredicted RBP8.71□□□□□ -1.02
MRPL28YDR462W SNF2P22082 1703 aa8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms