RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeastyeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDR15YDR406W ULS1Q08562 1619 aa6.19□□□□□ -1.42
PDR15YDR406W SRB8P25648 1427 aa6.19□□□□□ -1.42
PDR15YDR406W URN1Q06525 465 aaKnown RBP6.19□□□□□ -1.42
PDR15YDR406W TY1B-HO13535 1793 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-DR5P0C2I2 1755 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-DR6P0C2I3 1755 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-LR2P0C2I5 1755 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-LR3P0C2I6 1755 aaKnown RBP6.19□□□□□ -1.42
PDR15YDR406W TY1B-PR1P0C2I9 1755 aaKnown RBP6.19□□□□□ -1.42
PDR15YDR406W TY1B-PR2P0C2J0 1756 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-PR3P0C2J1 1755 aaKnown RBP6.19□□□□□ -1.42
PDR15YDR406W TY1B-JR1P47098 1755 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-ML2Q03434 1755 aaKnown RBP6.19□□□□□ -1.42
PDR15YDR406W TY1B-ER1Q03612 1755 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-ML1Q04711 1755 aaKnown RBP6.19□□□□□ -1.42
PDR15YDR406W TY1B-BRQ12193 1756 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-GR2Q12269 1755 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-OLQ12273 1755 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-GR3Q12316 1755 aa6.19□□□□□ -1.42
PDR15YDR406W TY1B-PLQ12414 1755 aaKnown RBP6.19□□□□□ -1.42
PDR15YDR406W TY1B-ORQ92393 1755 aa6.19□□□□□ -1.42
PDR15YDR406W MET5P47169 1442 aa6.16□□□□□ -1.42
PDR15YDR406W DNF1P32660 1571 aa6.16□□□□□ -1.42
PDR15YDR406W NTE1Q04958 1679 aa6.15□□□□□ -1.42
PDR15YDR406W MMS1Q06211 1407 aa6.14□□□□□ -1.43
PDR15YDR406W RPA190P10964 1664 aaKnown RBP6.12□□□□□ -1.43
PDR15YDR406W NUP170P38181 1502 aa6.12□□□□□ -1.43
PDR15YDR406W RPO21P04050 1733 aaKnown RBP6.11□□□□□ -1.43
PDR15YDR406W TY1B-JR2P47100 1755 aaKnown RBP6.1□□□□□ -1.43
PDR15YDR406W TY1B-ER2Q03619 1755 aa6.1□□□□□ -1.43
PDR15YDR406W TY1B-MR1Q04214 1755 aa6.1□□□□□ -1.43
PDR15YDR406W TY1B-MR2Q04670 1755 aaKnown RBP6.1□□□□□ -1.43
PDR15YDR406W TY1B-LR1Q12088 1755 aaKnown RBP6.1□□□□□ -1.43
PDR15YDR406W TY1B-NL1Q12112 1755 aa6.1□□□□□ -1.43
PDR15YDR406W TY1B-GR1Q12141 1755 aa6.1□□□□□ -1.43
PDR15YDR406W TY1B-BLQ12490 1755 aa6.1□□□□□ -1.43
PDR15YDR406W PDR10P51533 1564 aa6.1□□□□□ -1.43
PDR15YDR406W BNR1P40450 1375 aa6.1□□□□□ -1.43
PDR15YDR406W IRC20Q06554 1556 aa6.09□□□□□ -1.43
PDR15YDR406W TY3B-GQ99315 1547 aa6.09□□□□□ -1.43
PDR15YDR406W IQG1Q12280 1495 aa6.09□□□□□ -1.44
PDR15YDR406W PDR12Q02785 1511 aa6.08□□□□□ -1.44
PDR15YDR406W GDB1Q06625 1536 aa6.08□□□□□ -1.44
PDR15YDR406W DRS2P39524 1355 aa6.07□□□□□ -1.44
PDR15YDR406W ARO1P08566 1588 aaKnown RBP6.06□□□□□ -1.44
PDR15YDR406W LTE1P07866 1435 aa6.06□□□□□ -1.44
PDR15YDR406W BUD3P25558 1636 aa6.06□□□□□ -1.44
PDR15YDR406W YRB30P53107 440 aaPredicted RBP6.05□□□□□ -1.44
PDR15YDR406W SEC3P33332 1336 aaKnown RBP6.05□□□□□ -1.44
PDR15YDR406W ORC1P54784 914 aaPredicted RBP6.04□□□□□ -1.44
PDR15YDR406W YBT1P32386 1661 aa6.04□□□□□ -1.44
PDR15YDR406W MIF2P35201 549 aa6.04□□□□□ -1.44
PDR15YDR406W RLF2Q12495 606 aa6.02□□□□□ -1.45
PDR15YDR406W YSP2Q06681 1438 aa6.02□□□□□ -1.45
PDR15YDR406W SPO14P36126 1683 aa6.02□□□□□ -1.45
PDR15YDR406W TOP1P04786 769 aa6.02□□□□□ -1.45
PDR15YDR406W TRM3Q07527 1436 aa6.01□□□□□ -1.45
PDR15YDR406W ENP1P38333 483 aaKnown RBP6.01□□□□□ -1.45
PDR15YDR406W RPN1P38764 993 aaKnown RBP6□□□□□ -1.45
PDR15YDR406W TAF5P38129 798 aa5.99□□□□□ -1.45
PDR15YDR406W ESL2P36168 1195 aa5.98□□□□□ -1.45
PDR15YDR406W GCN2P15442 1659 aa5.98□□□□□ -1.45
PDR15YDR406W MHP1P43638 1398 aa5.95□□□□□ -1.46
PDR15YDR406W YRF1-1P0CX20 1796 aa5.95□□□□□ -1.46
PDR15YDR406W YRF1-5P0CX21 1796 aa5.95□□□□□ -1.46
PDR15YDR406W YRF1-8P0CX22 1796 aa5.95□□□□□ -1.46
PDR15YDR406W SPT7P35177 1332 aa5.95□□□□□ -1.46
PDR15YDR406W KIP3P53086 805 aaKnown RBP5.94□□□□□ -1.46
PDR15YDR406W ITT1Q04638 464 aa5.94□□□□□ -1.46
PDR15YDR406W RAV1P47104 1357 aa5.93□□□□□ -1.46
PDR15YDR406W RTC1Q08281 1341 aa5.93□□□□□ -1.46
PDR15YDR406W NSR1P27476 414 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
PDR15YDR406W MRX12P47084 519 aa5.92□□□□□ -1.46
PDR15YDR406W FPR3P38911 411 aaKnown RBP5.91□□□□□ -1.46
PDR15YDR406W PDS5Q04264 1277 aa5.91□□□□□ -1.46
PDR15YDR406W ABP1P15891 592 aaKnown RBP5.91□□□□□ -1.46
PDR15YDR406W IPL1P38991 367 aa5.9□□□□□ -1.46
PDR15YDR406W NOP2P40991 618 aaKnown RBP5.9□□□□□ -1.46
PDR15YDR406W YAP3P38749 330 aa5.89□□□□□ -1.47
PDR15YDR406W SPE2P21182 396 aa5.89□□□□□ -1.47
PDR15YDR406W NOP8Q08287 484 aaPredicted RBP5.88□□□□□ -1.47
PDR15YDR406W SEC7P11075 2009 aaKnown RBP5.88□□□□□ -1.47
PDR15YDR406W DOP1Q03921 1698 aa5.88□□□□□ -1.47
PDR15YDR406W YOR093CQ12275 1648 aa5.87□□□□□ -1.47
PDR15YDR406W PDR5P33302 1511 aaKnown RBP5.87□□□□□ -1.47
PDR15YDR406W PSD2P53037 1138 aaKnown RBP5.87□□□□□ -1.47
PDR15YDR406W TAF8Q03750 510 aa5.87□□□□□ -1.47
PDR15YDR406W IML1P47170 1584 aa5.87□□□□□ -1.47
PDR15YDR406W IOC4Q04213 475 aa5.87□□□□□ -1.47
PDR15YDR406W TYS1P36421 394 aaKnown RBP5.86□□□□□ -1.47
PDR15YDR406W CHC1P22137 1653 aaKnown RBP5.84□□□□□ -1.47
PDR15YDR406W ALD4P46367 519 aaKnown RBP5.84□□□□□ -1.48
PDR15YDR406W CHZ1P40019 153 aaPredicted RBP5.83□□□□□ -1.48
PDR15YDR406W DOS2P54858 310 aa5.83□□□□□ -1.48
PDR15YDR406W MNN4P36044 1178 aa5.83□□□□□ -1.48
PDR15YDR406W CAB1Q04430 367 aa5.83□□□□□ -1.48
PDR15YDR406W VMR1P38735 1592 aa5.83□□□□□ -1.48
PDR15YDR406W DNF2Q12675 1612 aa5.82□□□□□ -1.48
PDR15YDR406W YLR419WQ06698 1435 aaKnown RBP5.82□□□□□ -1.48
PDR15YDR406W RIA1P53893 1110 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms