RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W YEL023CP39992 682 aa10.64□□□□□ -0.71
SHE9YDR393W PTC4P38089 393 aa10.61□□□□□ -0.71
SHE9YDR393W GRE2Q12068 342 aaKnown RBP10.61□□□□□ -0.71
SHE9YDR393W MIF2P35201 549 aa10.6□□□□□ -0.71
SHE9YDR393W EDS1P38073 919 aa10.6□□□□□ -0.71
SHE9YDR393W SAP30P38429 201 aa10.59□□□□□ -0.71
SHE9YDR393W YDL129WQ07555 291 aa10.58□□□□□ -0.72
SHE9YDR393W PTC3P34221 468 aaKnown RBP10.55□□□□□ -0.72
SHE9YDR393W ATH1P48016 1211 aa10.52□□□□□ -0.73
SHE9YDR393W COQ8P27697 501 aa10.51□□□□□ -0.73
SHE9YDR393W GUT1P32190 709 aa10.5□□□□□ -0.73
SHE9YDR393W CHL1P22516 861 aaPredicted RBP10.44□□□□□ -0.74
SHE9YDR393W NST1P53935 1240 aa10.44□□□□□ -0.74
SHE9YDR393W PRE3P38624 215 aa10.43□□□□□ -0.74
SHE9YDR393W PML39Q03760 334 aa10.42□□□□□ -0.74
SHE9YDR393W SOL3P38858 249 aa10.39□□□□□ -0.75
SHE9YDR393W YDR344CQ05510 147 aa10.39□□□□□ -0.75
SHE9YDR393W BCK2P33306 851 aa10.37□□□□□ -0.75
SHE9YDR393W NOP53Q12080 455 aaKnown RBP10.32□□□□□ -0.76
SHE9YDR393W AI4P03878 556 aa10.3□□□□□ -0.76
SHE9YDR393W MPH3P0CE00 602 aa10.3□□□□□ -0.76
SHE9YDR393W MID1P41821 548 aa10.3□□□□□ -0.76
SHE9YDR393W ILV3P39522 585 aaKnown RBP10.29□□□□□ -0.76
SHE9YDR393W ELP4Q02884 456 aaKnown RBP10.26□□□□□ -0.77
SHE9YDR393W ARH1P48360 493 aa10.25□□□□□ -0.77
SHE9YDR393W YGR273CP53329 174 aa10.25□□□□□ -0.77
SHE9YDR393W VRP1P37370 817 aa10.19□□□□□ -0.78
SHE9YDR393W PEX29Q03370 554 aa10.18□□□□□ -0.78
SHE9YDR393W XDJ1P39102 459 aa10.14□□□□□ -0.79
SHE9YDR393W SPT23P35210 1082 aa10.11□□□□□ -0.79
SHE9YDR393W HAP5Q02516 242 aa10.11□□□□□ -0.79
SHE9YDR393W MPC54Q08550 464 aa10.11□□□□□ -0.79
SHE9YDR393W SET1P38827 1080 aaKnown RBP10.1□□□□□ -0.79
SHE9YDR393W SLI15P38283 698 aa10.08□□□□□ -0.8
SHE9YDR393W BNI4P53858 892 aa10.05□□□□□ -0.8
SHE9YDR393W KEX1P09620 729 aa10.04□□□□□ -0.8
SHE9YDR393W NMA111P53920 997 aa10.01□□□□□ -0.81
SHE9YDR393W DPL1Q05567 589 aa10□□□□□ -0.81
SHE9YDR393W PTC2P39966 464 aaKnown RBP9.98□□□□□ -0.81
SHE9YDR393W YML082WQ04533 649 aaKnown RBP9.98□□□□□ -0.81
SHE9YDR393W YLR326WQ06170 240 aaKnown RBP9.97□□□□□ -0.81
SHE9YDR393W UBP14P38237 781 aaKnown RBP9.96□□□□□ -0.82
SHE9YDR393W VHR2P40041 505 aa9.93□□□□□ -0.82
SHE9YDR393W DPS1P04802 557 aaKnown RBP9.92□□□□□ -0.82
SHE9YDR393W CDC73Q06697 393 aa9.9□□□□□ -0.82
SHE9YDR393W PCS60P38137 543 aaKnown RBP RIP-Chip data9.88□□□□□ -0.83 RIP-Chip
SHE9YDR393W ISU2Q12056 156 aa9.88□□□□□ -0.83
SHE9YDR393W YPR015CQ12531 247 aa9.87□□□□□ -0.83
SHE9YDR393W RAM1P22007 431 aa9.85□□□□□ -0.83
SHE9YDR393W RAD54P32863 898 aa9.85□□□□□ -0.83
SHE9YDR393W IFH1P39520 1085 aa9.83□□□□□ -0.84
SHE9YDR393W YDR090CQ03193 310 aa9.8□□□□□ -0.84
SHE9YDR393W YPR148CQ06523 435 aa9.78□□□□□ -0.84
SHE9YDR393W PDR1P12383 1068 aa9.76□□□□□ -0.85
SHE9YDR393W SRC1Q03707 834 aa9.74□□□□□ -0.85
SHE9YDR393W RPP1BP10622 106 aaKnown RBP9.72□□□□□ -0.85
SHE9YDR393W KIC1P38692 1080 aa9.7□□□□□ -0.86
SHE9YDR393W REF2P42073 533 aaPredicted RBP9.7□□□□□ -0.86
SHE9YDR393W GYP1Q08484 637 aa9.67□□□□□ -0.86
SHE9YDR393W RAS1P01119 309 aa9.66□□□□□ -0.86
SHE9YDR393W GAP1P19145 602 aaPredicted RBP9.66□□□□□ -0.86
SHE9YDR393W VPS70P47161 811 aa9.63□□□□□ -0.87
SHE9YDR393W YRR1Q12172 810 aa9.62□□□□□ -0.87
SHE9YDR393W SDH2P21801 266 aa9.61□□□□□ -0.87
SHE9YDR393W SAS4Q04003 481 aa9.61□□□□□ -0.87
SHE9YDR393W ORC6P38826 435 aa9.6□□□□□ -0.87
SHE9YDR393W PEX21P50091 288 aa9.6□□□□□ -0.87
SHE9YDR393W CSC1Q06538 782 aa9.6□□□□□ -0.87
SHE9YDR393W TFB4Q12004 338 aa9.59□□□□□ -0.87
SHE9YDR393W AMS1P22855 1083 aa9.58□□□□□ -0.88
SHE9YDR393W BUD20Q08004 166 aaPredicted RBP9.57□□□□□ -0.88
SHE9YDR393W STR2P47164 639 aa9.56□□□□□ -0.88
SHE9YDR393W COX6P00427 148 aa9.55□□□□□ -0.88
SHE9YDR393W MAK21Q12176 1025 aaKnown RBP9.55□□□□□ -0.88
SHE9YDR393W TUM1Q08686 304 aaKnown RBP9.54□□□□□ -0.88
SHE9YDR393W ISM1P48526 1002 aa9.52□□□□□ -0.88
SHE9YDR393W NUD1P32336 851 aa9.51□□□□□ -0.89
SHE9YDR393W PRT1P06103 763 aaKnown RBP9.5□□□□□ -0.89
SHE9YDR393W MVP1P40959 511 aaKnown RBP9.47□□□□□ -0.89
SHE9YDR393W YEL077CQ3E7X8 1277 aa9.47□□□□□ -0.89
SHE9YDR393W MRF1P30775 413 aaPredicted RBP9.45□□□□□ -0.9
SHE9YDR393W TY1A-DR4O74302 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-HP0C2I4 478 aaKnown RBP9.42□□□□□ -0.9
SHE9YDR393W TY1A-AP0CX57 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-PR1P0CX58 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-ORP0CX59 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-PR2P0CX60 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-DR5P0CX65 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-ER2P0CX66 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-GR3P0CX67 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-LR1P0CX68 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-MR2P0CX69 440 aa9.42□□□□□ -0.9
SHE9YDR393W TRK1P12685 1235 aa9.42□□□□□ -0.9
SHE9YDR393W RGR1P19263 1082 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-JR2P47099 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-DR1Q03856 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-ML1Q04706 440 aaKnown RBP9.42□□□□□ -0.9
SHE9YDR393W TY1A-BRQ12217 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-NL2Q12470 440 aa9.42□□□□□ -0.9
SHE9YDR393W TY1A-GR2Q12485 440 aa9.42□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms